PSB
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | sing | 1.38Å | 1.51Å | |
N1 | HN11 | sing | 0.97Å | 1.02Å | |
N1 | HN12 | sing | 0.97Å | 1.02Å | |
C2 | N3 | sing | 1.33Å | 1.40Å | Aromatic |
C2 | N11 | doub | 1.32Å | 1.31Å | Aromatic |
N3 | C4 | doub | 1.32Å | 1.40Å | Aromatic |
C4 | O5 | sing | 1.35Å | 1.27Å | |
C4 | C6 | sing | 1.41Å | 1.52Å | Aromatic |
O5 | HO5 | sing | 0.97Å | 0.95Å | |
C6 | N7 | doub | 1.32Å | 1.48Å | Aromatic |
C6 | C10 | sing | 1.43Å | 1.44Å | Aromatic |
N7 | N8 | sing | 1.29Å | 1.43Å | Aromatic |
N8 | N9 | sing | 1.29Å | 1.41Å | Aromatic |
N8 | C12 | sing | 1.40Å | 1.32Å | Aromatic |
N9 | C10 | doub | 1.32Å | 1.11Å | Aromatic |
C10 | N11 | sing | 1.34Å | 1.47Å | Aromatic |
C12 | C13 | sing | 1.39Å | 1.43Å | Aromatic |
C12 | C17 | doub | 1.39Å | 1.36Å | Aromatic |
C13 | C14 | doub | 1.38Å | 1.42Å | Aromatic |
C13 | H13 | sing | 1.08Å | 1.10Å | |
C14 | C15 | sing | 1.38Å | 1.43Å | Aromatic |
C14 | H14 | sing | 1.08Å | 1.10Å | |
C15 | C16 | doub | 1.40Å | 1.46Å | Aromatic |
C15 | H15 | sing | 1.08Å | 1.10Å | |
C16 | C17 | sing | 1.40Å | 1.40Å | Aromatic |
C16 | C18 | sing | 1.48Å | 1.42Å | |
C17 | H17 | sing | 1.08Å | 1.10Å | |
C18 | O19 | doub | 1.21Å | 1.30Å | |
C18 | N20 | sing | 1.35Å | 1.19Å | |
N20 | C21 | sing | 1.47Å | 1.51Å | |
N20 | H20 | sing | 0.97Å | 1.02Å | |
C21 | C22 | sing | 1.51Å | 1.53Å | |
C21 | H211 | sing | 1.09Å | 1.12Å | |
C21 | H212 | sing | 1.09Å | 1.12Å | |
C22 | C23 | doub | 1.38Å | 1.52Å | Aromatic |
C22 | C27 | sing | 1.39Å | 1.31Å | Aromatic |
C23 | C24 | sing | 1.38Å | 1.41Å | Aromatic |
C23 | H23 | sing | 1.08Å | 1.10Å | |
C24 | C25 | doub | 1.38Å | 1.35Å | Aromatic |
C24 | H24 | sing | 1.08Å | 1.10Å | |
C25 | C26 | sing | 1.38Å | 1.45Å | Aromatic |
C25 | H25 | sing | 1.08Å | 1.10Å | |
C26 | C27 | doub | 1.39Å | 1.56Å | Aromatic |
C26 | H26 | sing | 1.08Å | 1.10Å | |
C27 | S28 | sing | 1.76Å | 1.71Å | |
S28 | C29 | sing | 1.76Å | 1.71Å | |
C29 | C30 | doub | 1.39Å | 1.43Å | Aromatic |
C29 | C34 | sing | 1.39Å | 1.40Å | Aromatic |
C30 | C31 | sing | 1.38Å | 1.38Å | Aromatic |
C30 | H30 | sing | 1.08Å | 1.10Å | |
C31 | C32 | doub | 1.38Å | 1.43Å | Aromatic |
C31 | H31 | sing | 1.08Å | 1.10Å | |
C32 | C33 | sing | 1.38Å | 1.44Å | Aromatic |
C32 | H32 | sing | 1.08Å | 1.10Å | |
C33 | C34 | doub | 1.38Å | 1.40Å | Aromatic |
C33 | H33 | sing | 1.08Å | 1.10Å | |
C34 | C35 | sing | 1.51Å | 1.55Å | |
C35 | O36 | sing | 1.43Å | 1.41Å | |
C35 | H351 | sing | 1.09Å | 1.12Å | |
C35 | H352 | sing | 1.09Å | 1.12Å | |
O36 | H36 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | HN11 | 119.9° | 120.0° |
C2 | N1 | HN12 | 108.4° | 119.9° |
N1 | C2 | N3 | 120.0° | 118.6° |
N1 | C2 | N11 | 120.5° | 118.7° |
HN11 | N1 | HN12 | 108.4° | 120.0° |
N3 | C2 | N11 | 119.5° | 122.8° |
C2 | N3 | C4 | 122.4° | 121.5° |
C2 | N11 | C10 | 123.1° | 120.5° |
N3 | C4 | O5 | 117.8° | 120.7° |
N3 | C4 | C6 | 121.0° | 118.5° |
O5 | C4 | C6 | 121.2° | 120.8° |
C4 | O5 | HO5 | 117.8° | 106.8° |
C4 | C6 | N7 | 140.0° | 136.2° |
C4 | C6 | C10 | 112.8° | 118.2° |
N7 | C6 | C10 | 107.2° | 105.6° |
C6 | N7 | N8 | 99.8° | 108.6° |
C6 | C10 | N9 | 109.7° | 105.4° |
C6 | C10 | N11 | 121.2° | 118.6° |
N7 | N8 | N9 | 106.8° | 111.7° |
N7 | N8 | C12 | 134.5° | 124.2° |
N9 | N8 | C12 | 118.6° | 124.2° |
N8 | N9 | C10 | 116.5° | 108.8° |
N8 | C12 | C13 | 118.3° | 120.0° |
N8 | C12 | C17 | 117.6° | 120.0° |
N9 | C10 | N11 | 129.0° | 136.0° |
C13 | C12 | C17 | 123.7° | 120.0° |
C12 | C13 | C14 | 118.0° | 120.2° |
C12 | C13 | H13 | 121.3° | 119.9° |
C12 | C17 | C16 | 120.6° | 119.8° |
C12 | C17 | H17 | 118.2° | 120.1° |
C14 | C13 | H13 | 120.8° | 119.8° |
C13 | C14 | C15 | 118.7° | 120.2° |
C13 | C14 | H14 | 120.4° | 119.9° |
C15 | C14 | H14 | 120.9° | 119.9° |
C14 | C15 | C16 | 121.0° | 120.0° |
C14 | C15 | H15 | 118.3° | 120.0° |
C16 | C15 | H15 | 120.7° | 120.0° |
C15 | C16 | C17 | 117.8° | 119.8° |
C15 | C16 | C18 | 123.6° | 120.1° |
C17 | C16 | C18 | 118.2° | 120.1° |
C16 | C17 | H17 | 121.2° | 120.1° |
C16 | C18 | O19 | 123.1° | 120.0° |
C16 | C18 | N20 | 115.1° | 119.9° |
O19 | C18 | N20 | 120.7° | 120.0° |
C18 | N20 | C21 | 108.7° | 120.0° |
C18 | N20 | H20 | 116.5° | 120.1° |
C21 | N20 | H20 | 134.8° | 120.0° |
N20 | C21 | C22 | 108.3° | 109.5° |
N20 | C21 | H211 | 112.7° | 109.5° |
N20 | C21 | H212 | 112.7° | 109.4° |
C22 | C21 | H211 | 112.7° | 109.5° |
C22 | C21 | H212 | 112.7° | 109.5° |
C21 | C22 | C23 | 107.7° | 120.1° |
C21 | C22 | C27 | 134.2° | 120.0° |
H211 | C21 | H212 | 97.7° | 109.5° |
C23 | C22 | C27 | 118.0° | 119.9° |
C22 | C23 | C24 | 122.9° | 120.1° |
C22 | C23 | H23 | 122.5° | 119.9° |
C22 | C27 | C26 | 118.8° | 119.8° |
C22 | C27 | S28 | 118.9° | 120.1° |
C24 | C23 | H23 | 114.6° | 120.0° |
C23 | C24 | C25 | 120.6° | 120.2° |
C23 | C24 | H24 | 121.8° | 119.9° |
C25 | C24 | H24 | 117.6° | 119.9° |
C24 | C25 | C26 | 119.2° | 120.1° |
C24 | C25 | H25 | 117.2° | 120.0° |
C26 | C25 | H25 | 123.7° | 119.9° |
C25 | C26 | C27 | 120.5° | 119.9° |
C25 | C26 | H26 | 116.0° | 120.0° |
C27 | C26 | H26 | 123.4° | 120.1° |
C26 | C27 | S28 | 122.2° | 120.1° |
C27 | S28 | C29 | 109.8° | 100.0° |
S28 | C29 | C30 | 120.4° | 120.0° |
S28 | C29 | C34 | 118.7° | 120.1° |
C30 | C29 | C34 | 120.9° | 119.9° |
C29 | C30 | C31 | 120.1° | 119.9° |
C29 | C30 | H30 | 121.8° | 120.1° |
C29 | C34 | C33 | 119.8° | 119.9° |
C29 | C34 | C35 | 119.4° | 120.0° |
C31 | C30 | H30 | 118.1° | 120.1° |
C30 | C31 | C32 | 119.6° | 120.1° |
C30 | C31 | H31 | 118.4° | 119.9° |
C32 | C31 | H31 | 121.9° | 120.0° |
C31 | C32 | C33 | 120.0° | 120.2° |
C31 | C32 | H32 | 119.7° | 119.9° |
C33 | C32 | H32 | 120.3° | 119.9° |
C32 | C33 | C34 | 119.6° | 120.0° |
C32 | C33 | H33 | 121.4° | 120.0° |
C34 | C33 | H33 | 119.0° | 120.0° |
C33 | C34 | C35 | 120.9° | 120.0° |
C34 | C35 | O36 | 111.4° | 109.5° |
C34 | C35 | H351 | 111.5° | 109.5° |
C34 | C35 | H352 | 111.5° | 109.5° |
O36 | C35 | H351 | 111.5° | 109.4° |
O36 | C35 | H352 | 111.5° | 109.5° |
C35 | O36 | H36 | 111.4° | 106.8° |
H351 | C35 | H352 | 98.8° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | N1 | HN11 | HN12 | 125.2° | 179.7° |
N1 | C2 | N3 | N11 | 177.5° | 179.7° |
N1 | C2 | N3 | C4 | 177.5° | 180.0° |
N1 | C2 | N11 | C10 | 178.1° | 179.7° |
HN11 | N1 | C2 | N3 | 180.0° | 0.0° |
HN11 | N1 | C2 | N11 | 2.5° | 179.7° |
HN12 | N1 | C2 | N3 | 54.7° | 179.7° |
HN12 | N1 | C2 | N11 | 127.8° | 0.6° |
C2 | N3 | C4 | O5 | 179.4° | 180.0° |
C2 | N3 | C4 | C6 | 0.4° | 0.0° |
N3 | C2 | N11 | C10 | 0.6° | 0.6° |
N11 | C2 | N3 | C4 | 0.0° | 0.3° |
C2 | N11 | C10 | C6 | 1.5° | 0.5° |
C2 | N11 | C10 | N9 | 178.8° | 179.8° |
N3 | C4 | O5 | C6 | 179.1° | 180.0° |
N3 | C4 | O5 | HO5 | 180.0° | 90.1° |
N3 | C4 | C6 | N7 | 179.7° | 179.9° |
N3 | C4 | C6 | C10 | 1.2° | 0.0° |
O5 | C4 | C6 | N7 | 0.7° | 0.1° |
O5 | C4 | C6 | C10 | 179.8° | 180.0° |
C6 | C4 | O5 | HO5 | 1.0° | 89.9° |
C4 | C6 | N7 | C10 | 179.1° | 179.9° |
C4 | C6 | N7 | N8 | 179.8° | 180.0° |
C4 | C6 | C10 | N9 | 179.4° | 180.0° |
C4 | C6 | C10 | N11 | 1.7° | 0.3° |
C6 | N7 | N8 | N9 | 0.7° | 0.1° |
C6 | N7 | N8 | C12 | 176.1° | 179.9° |
N7 | C6 | C10 | N9 | 1.2° | 0.0° |
N7 | C6 | C10 | N11 | 178.9° | 179.8° |
C10 | C6 | N7 | N8 | 1.1° | 0.1° |
C6 | C10 | N9 | N8 | 0.7° | 0.0° |
C6 | C10 | N9 | N11 | 177.5° | 179.7° |
N7 | N8 | N9 | C12 | 177.4° | 179.9° |
N7 | N8 | N9 | C10 | 0.1° | 0.1° |
N7 | N8 | C12 | C13 | 79.5° | 0.1° |
N7 | N8 | C12 | C17 | 107.7° | 179.8° |
N8 | N9 | C10 | N11 | 178.2° | 179.7° |
N9 | N8 | C12 | C13 | 97.1° | 180.0° |
N9 | N8 | C12 | C17 | 75.7° | 0.4° |
C12 | N8 | N9 | C10 | 177.4° | 179.9° |
N8 | C12 | C13 | C17 | 172.4° | 179.6° |
N8 | C12 | C13 | C14 | 169.0° | 179.9° |
N8 | C12 | C13 | H13 | 11.0° | 0.1° |
N8 | C12 | C17 | C16 | 167.7° | 179.8° |
N8 | C12 | C17 | H17 | 12.3° | 0.3° |
C12 | C13 | C14 | H13 | 180.0° | 179.9° |
C12 | C13 | C14 | C15 | 0.9° | 0.0° |
C12 | C13 | C14 | H14 | 179.1° | 180.0° |
C13 | C12 | C17 | C16 | 4.7° | 0.6° |
C13 | C12 | C17 | H17 | 175.3° | 179.9° |
C17 | C12 | C13 | C14 | 3.3° | 0.3° |
C17 | C12 | C13 | H13 | 176.7° | 179.8° |
C12 | C17 | C16 | C15 | 1.6° | 0.6° |
C12 | C17 | C16 | H17 | 180.0° | 179.5° |
C12 | C17 | C16 | C18 | 172.4° | 179.7° |
C13 | C14 | C15 | H14 | 180.0° | 180.0° |
C13 | C14 | C15 | C16 | 3.7° | 0.0° |
C13 | C14 | C15 | H15 | 176.3° | 180.0° |
H13 | C13 | C14 | C15 | 179.1° | 179.9° |
H13 | C13 | C14 | H14 | 0.9° | 0.0° |
C14 | C15 | C16 | H15 | 180.0° | 180.0° |
C14 | C15 | C16 | C17 | 2.5° | 0.3° |
C14 | C15 | C16 | C18 | 176.2° | 180.0° |
H14 | C14 | C15 | C16 | 176.3° | 180.0° |
H14 | C14 | C15 | H15 | 3.7° | 0.1° |
C15 | C16 | C17 | C18 | 174.0° | 179.7° |
C15 | C16 | C17 | H17 | 178.3° | 179.9° |
C15 | C16 | C18 | O19 | 175.2° | 179.9° |
C15 | C16 | C18 | N20 | 17.1° | 0.0° |
H15 | C15 | C16 | C17 | 177.5° | 179.7° |
H15 | C15 | C16 | C18 | 3.9° | 0.0° |
C17 | C16 | C18 | O19 | 11.2° | 0.2° |
C17 | C16 | C18 | N20 | 156.5° | 179.7° |
C18 | C16 | C17 | H17 | 7.7° | 0.3° |
C16 | C18 | O19 | N20 | 167.0° | 180.0° |
C16 | C18 | N20 | C21 | 161.6° | 180.0° |
C16 | C18 | N20 | H20 | 18.4° | 0.0° |
O19 | C18 | N20 | C21 | 6.4° | 0.1° |
O19 | C18 | N20 | H20 | 173.5° | 180.0° |
C18 | N20 | C21 | H20 | 179.9° | 180.0° |
C18 | N20 | C21 | C22 | 147.0° | 174.8° |
C18 | N20 | C21 | H211 | 21.7° | 54.8° |
C18 | N20 | C21 | H212 | 87.8° | 65.2° |
N20 | C21 | C22 | H211 | 125.3° | 120.0° |
N20 | C21 | C22 | H212 | 125.3° | 119.9° |
N20 | C21 | H211 | H212 | 118.6° | 119.9° |
N20 | C21 | C22 | C23 | 49.5° | 102.2° |
N20 | C21 | C22 | C27 | 135.1° | 78.0° |
H20 | N20 | C21 | C22 | 33.1° | 5.2° |
H20 | N20 | C21 | H211 | 158.4° | 125.2° |
H20 | N20 | C21 | H212 | 92.2° | 114.8° |
C22 | C21 | H211 | H212 | 118.6° | 120.0° |
C21 | C22 | C23 | C27 | 176.3° | 179.8° |
C21 | C22 | C23 | C24 | 174.7° | 180.0° |
C21 | C22 | C23 | H23 | 5.3° | 0.0° |
C21 | C22 | C27 | C26 | 173.9° | 179.7° |
C21 | C22 | C27 | S28 | 4.4° | 0.3° |
H211 | C21 | C22 | C23 | 75.8° | 137.8° |
H211 | C21 | C22 | C27 | 99.6° | 42.0° |
H212 | C21 | C22 | C23 | 174.7° | 17.7° |
H212 | C21 | C22 | C27 | 9.8° | 162.0° |
C22 | C23 | C24 | H23 | 180.0° | 180.0° |
C22 | C23 | C24 | C25 | 0.8° | 0.0° |
C22 | C23 | C24 | H24 | 179.2° | 180.0° |
C23 | C22 | C27 | C26 | 1.2° | 0.5° |
C23 | C22 | C27 | S28 | 179.5° | 180.0° |
C27 | C22 | C23 | C24 | 1.6° | 0.3° |
C27 | C22 | C23 | H23 | 178.4° | 179.8° |
C22 | C27 | C26 | C25 | 0.1° | 0.6° |
C22 | C27 | C26 | S28 | 178.2° | 179.4° |
C22 | C27 | C26 | H26 | 179.9° | 179.7° |
C22 | C27 | S28 | C29 | 154.0° | 75.8° |
C23 | C24 | C25 | H24 | 180.0° | 179.9° |
C23 | C24 | C25 | C26 | 0.4° | 0.1° |
C23 | C24 | C25 | H25 | 179.6° | 180.0° |
H23 | C23 | C24 | C25 | 179.2° | 180.0° |
H23 | C23 | C24 | H24 | 0.8° | 0.1° |
C24 | C25 | C26 | H25 | 180.0° | 179.9° |
C24 | C25 | C26 | C27 | 0.8° | 0.3° |
C24 | C25 | C26 | H26 | 179.3° | 179.9° |
H24 | C24 | C25 | C26 | 179.7° | 180.0° |
H24 | C24 | C25 | H25 | 0.4° | 0.1° |
C25 | C26 | C27 | H26 | 180.0° | 179.7° |
C25 | C26 | C27 | S28 | 178.3° | 180.0° |
H25 | C25 | C26 | C27 | 179.2° | 179.8° |
H25 | C25 | C26 | H26 | 0.8° | 0.0° |
C26 | C27 | S28 | C29 | 27.8° | 104.7° |
H26 | C26 | C27 | S28 | 1.7° | 0.3° |
C27 | S28 | C29 | C30 | 40.6° | 6.1° |
C27 | S28 | C29 | C34 | 140.0° | 173.7° |
S28 | C29 | C30 | C34 | 179.5° | 179.7° |
S28 | C29 | C30 | C31 | 179.5° | 180.0° |
S28 | C29 | C30 | H30 | 0.5° | 0.0° |
S28 | C29 | C34 | C33 | 179.3° | 179.7° |
S28 | C29 | C34 | C35 | 0.5° | 0.3° |
C29 | C30 | C31 | H30 | 180.0° | 180.0° |
C29 | C30 | C31 | C32 | 0.3° | 0.0° |
C29 | C30 | C31 | H31 | 179.7° | 180.0° |
C30 | C29 | C34 | C33 | 0.1° | 0.6° |
C30 | C29 | C34 | C35 | 180.0° | 180.0° |
C34 | C29 | C30 | C31 | 0.0° | 0.3° |
C34 | C29 | C30 | H30 | 180.0° | 179.7° |
C29 | C34 | C33 | C32 | 0.1° | 0.6° |
C29 | C34 | C33 | C35 | 179.9° | 179.4° |
C29 | C34 | C33 | H33 | 180.0° | 179.6° |
C29 | C34 | C35 | O36 | 88.9° | 179.4° |
C29 | C34 | C35 | H351 | 145.8° | 59.4° |
C29 | C34 | C35 | H352 | 36.4° | 60.7° |
C30 | C31 | C32 | H31 | 179.9° | 180.0° |
C30 | C31 | C32 | C33 | 0.5° | 0.0° |
C30 | C31 | C32 | H32 | 179.4° | 180.0° |
H30 | C30 | C31 | C32 | 179.6° | 180.0° |
H30 | C30 | C31 | H31 | 0.3° | 0.1° |
C31 | C32 | C33 | H32 | 180.0° | 180.0° |
C31 | C32 | C33 | C34 | 0.4° | 0.3° |
C31 | C32 | C33 | H33 | 179.7° | 179.9° |
H31 | C31 | C32 | C33 | 179.5° | 180.0° |
H31 | C31 | C32 | H32 | 0.5° | 0.0° |
C32 | C33 | C34 | H33 | 179.9° | 179.7° |
C32 | C33 | C34 | C35 | 179.8° | 180.0° |
H32 | C32 | C33 | C34 | 179.6° | 179.7° |
H32 | C32 | C33 | H33 | 0.4° | 0.1° |
C33 | C34 | C35 | O36 | 91.2° | 0.0° |
C33 | C34 | C35 | H351 | 34.1° | 120.0° |
C33 | C34 | C35 | H352 | 143.5° | 120.0° |
H33 | C33 | C34 | C35 | 0.1° | 0.3° |
C34 | C35 | O36 | H351 | 125.3° | 120.0° |
C34 | C35 | O36 | H352 | 125.3° | 120.0° |
C34 | C35 | H351 | H352 | 117.4° | 120.1° |
C34 | C35 | O36 | H36 | 180.0° | 179.9° |
O36 | C35 | H351 | H352 | 117.4° | 120.0° |
H351 | C35 | O36 | H36 | 54.7° | 60.0° |
H352 | C35 | O36 | H36 | 54.7° | 59.9° |