PRV
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C | O | doub | 1.21Å | 1.22Å | |
C | CA | sing | 1.51Å | 1.52Å | |
N | CA | sing | 1.47Å | 1.47Å | |
N1 | O1 | sing | 1.22Å | 1.22Å | |
N1 | O2 | doub | 1.22Å | 1.22Å | |
N1 | CD2 | sing | 1.48Å | 1.41Å | |
CA | CG | sing | 1.51Å | 1.49Å | |
CG | CD1 | doub | 1.38Å | 1.40Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.39Å | Aromatic |
CZ | CE1 | doub | 1.38Å | 1.39Å | Aromatic |
CZ | CE2 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.39Å | Aromatic |
CD2 | CE2 | doub | 1.38Å | 1.39Å | Aromatic |
C | OXT | sing | 1.34Å | 3.42Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CZ | HZ | sing | 1.08Å | 1.08Å | |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 116.4° | 120.1° |
O | C | OXT | 137.8° | 119.9° |
C | CA | N | 113.1° | 109.4° |
C | CA | CG | 110.6° | 109.5° |
CA | C | OXT | 70.8° | 120.0° |
C | CA | HA | 107.9° | 109.5° |
N | CA | CG | 114.2° | 109.4° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 103.7° | 109.5° |
O1 | N1 | O2 | 118.3° | 120.0° |
O1 | N1 | CD2 | 122.4° | 120.0° |
O2 | N1 | CD2 | 119.3° | 120.0° |
N1 | CD2 | CG | 122.3° | 120.0° |
N1 | CD2 | CE2 | 118.2° | 120.0° |
CA | CG | CD1 | 120.5° | 120.0° |
CA | CG | CD2 | 120.1° | 120.0° |
CG | CA | HA | 106.6° | 109.5° |
CD1 | CG | CD2 | 119.4° | 120.0° |
CG | CD1 | CE1 | 120.8° | 120.0° |
CG | CD1 | HD1 | 119.6° | 120.0° |
CG | CD2 | CE2 | 119.5° | 120.0° |
CE1 | CZ | CE2 | 119.8° | 120.0° |
CZ | CE1 | CD1 | 119.6° | 120.0° |
CE1 | CZ | HZ | 120.1° | 120.0° |
CZ | CE1 | HE1 | 120.2° | 120.0° |
CZ | CE2 | CD2 | 120.8° | 120.0° |
CE2 | CZ | HZ | 120.1° | 120.0° |
CZ | CE2 | HE2 | 119.6° | 120.0° |
CE1 | CD1 | HD1 | 119.6° | 119.9° |
CD1 | CE1 | HE1 | 120.2° | 120.0° |
CD2 | CE2 | HE2 | 119.6° | 120.0° |
C | OXT | HXT | 109.5° | 117.1° |
H | N | H2 | 109.4° | 111.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 134.7° | 179.7° |
O | C | CA | N | 58.4° | 20.0° |
O | C | CA | CG | 172.1° | 100.0° |
O | C | CA | HA | 55.8° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
C | CA | N | CG | 127.7° | 120.0° |
C | CA | N | HA | 116.7° | 120.0° |
C | CA | CG | HA | 117.1° | 120.0° |
C | CA | CG | CD1 | 69.9° | 99.9° |
C | CA | CG | CD2 | 110.7° | 80.3° |
C | CA | N | H | 65.9° | 60.0° |
C | CA | N | H2 | 174.1° | 64.0° |
CA | C | OXT | HXT | 108.5° | 179.7° |
N | CA | CG | HA | 114.0° | 120.0° |
N | CA | CG | CD1 | 59.0° | 20.0° |
N | CA | CG | CD2 | 120.3° | 159.7° |
N | CA | C | OXT | 76.3° | 159.8° |
CA | N | H | H2 | 120.0° | 124.0° |
O1 | N1 | O2 | CD2 | 179.2° | 180.0° |
O1 | N1 | CD2 | CG | 11.8° | 180.0° |
O1 | N1 | CD2 | CE2 | 168.1° | 0.0° |
O2 | N1 | CD2 | CG | 169.1° | 0.0° |
O2 | N1 | CD2 | CE2 | 11.0° | 180.0° |
N1 | CD2 | CG | CA | 0.1° | 0.0° |
N1 | CD2 | CG | CD1 | 179.5° | 179.8° |
N1 | CD2 | CG | CE2 | 179.9° | 180.0° |
N1 | CD2 | CE2 | CZ | 179.9° | 179.9° |
N1 | CD2 | CE2 | HE2 | 0.1° | 0.3° |
CA | CG | CD1 | CD2 | 179.3° | 179.7° |
CA | CG | CD1 | CE1 | 180.0° | 180.0° |
CA | CG | CD2 | CE2 | 179.8° | 180.0° |
CG | CA | C | OXT | 53.3° | 80.3° |
CG | CA | N | H | 166.4° | 60.0° |
CG | CA | N | H2 | 46.4° | 176.0° |
CA | CG | CD1 | HD1 | 0.0° | 0.0° |
CG | CD1 | CE1 | CZ | 0.5° | 0.0° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.5° | 0.2° |
CD1 | CG | CA | HA | 173.0° | 140.0° |
CG | CD1 | CE1 | HE1 | 179.5° | 179.7° |
CG | CD2 | CE2 | CZ | 0.1° | 0.0° |
CD2 | CG | CD1 | CE1 | 0.7° | 0.2° |
CD2 | CG | CA | HA | 6.3° | 39.7° |
CD2 | CG | CD1 | HD1 | 179.3° | 179.7° |
CG | CD2 | CE2 | HE2 | 179.9° | 179.7° |
CE1 | CZ | CE2 | HZ | 180.0° | 179.6° |
CZ | CE1 | CD1 | HE1 | 180.0° | 179.7° |
CE1 | CZ | CE2 | CD2 | 0.1° | 0.3° |
CZ | CE1 | CD1 | HD1 | 179.5° | 180.0° |
CE1 | CZ | CE2 | HE2 | 179.9° | 180.0° |
CE2 | CZ | CE1 | CD1 | 0.1° | 0.3° |
CZ | CE2 | CD2 | HE2 | 180.0° | 179.6° |
CE2 | CZ | CE1 | HE1 | 179.9° | 180.0° |
CD1 | CE1 | CZ | HZ | 179.9° | 180.0° |
CD2 | CE2 | CZ | HZ | 179.9° | 180.0° |
OXT | C | CA | HA | 169.6° | 39.8° |
H | N | CA | HA | 50.7° | 180.0° |
H2 | N | CA | HA | 69.3° | 56.0° |
HZ | CZ | CE1 | HE1 | 0.1° | 0.3° |
HZ | CZ | CE2 | HE2 | 0.1° | 0.4° |
HD1 | CD1 | CE1 | HE1 | 0.5° | 0.3° |