PRK
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | O | doub | 1.21Å | 1.28Å | |
| C | CA | sing | 1.51Å | 1.51Å | |
| C | OXT | sing | 1.34Å | 1.34Å | |
| N | CA | sing | 1.47Å | 1.47Å | |
| CA | CB | sing | 1.53Å | 1.54Å | |
| CB | CG | sing | 1.53Å | 1.53Å | |
| CD | CE | sing | 1.53Å | 1.53Å | |
| CD | CG | sing | 1.53Å | 1.51Å | |
| CE | NZ | sing | 1.47Å | 1.48Å | |
| NZ | CAL | sing | 1.35Å | 1.34Å | |
| CAA | CAF | sing | 1.53Å | 1.49Å | |
| OAD | CAL | doub | 1.21Å | 1.25Å | |
| CAF | CAL | sing | 1.51Å | 1.51Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | HB2 | sing | 1.09Å | 1.10Å | |
| CB | HB3 | sing | 1.09Å | 1.10Å | |
| CD | HD2 | sing | 1.09Å | 1.10Å | |
| CD | HD3 | sing | 1.09Å | 1.10Å | |
| CE | HE2 | sing | 1.09Å | 1.10Å | |
| CE | HE3 | sing | 1.09Å | 1.10Å | |
| CG | HG2 | sing | 1.09Å | 1.10Å | |
| CG | HG3 | sing | 1.09Å | 1.10Å | |
| NZ | HZ | sing | 0.97Å | 1.00Å | |
| CAA | HAA | sing | 1.09Å | 1.10Å | |
| CAA | HAAA | sing | 1.09Å | 1.10Å | |
| CAA | HAAB | sing | 1.09Å | 1.10Å | |
| CAF | HAF | sing | 1.09Å | 1.10Å | |
| CAF | HAFA | sing | 1.09Å | 1.10Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O | C | CA | 119.6° | 120.0° |
| O | C | OXT | 124.0° | 120.0° |
| CA | C | OXT | 116.3° | 120.0° |
| C | CA | N | 110.9° | 109.5° |
| C | CA | CB | 109.4° | 109.5° |
| C | CA | HA | 108.9° | 109.5° |
| C | OXT | HXT | 109.5° | 117.0° |
| N | CA | CB | 110.5° | 109.5° |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.5° | 111.0° |
| N | CA | HA | 107.8° | 109.4° |
| CA | CB | CG | 112.3° | 109.5° |
| CB | CA | HA | 109.3° | 109.4° |
| CA | CB | HB2 | 108.5° | 109.4° |
| CA | CB | HB3 | 108.5° | 109.5° |
| CB | CG | CD | 110.8° | 109.4° |
| CG | CB | HB2 | 108.5° | 109.5° |
| CG | CB | HB3 | 108.5° | 109.5° |
| CB | CG | HG2 | 109.0° | 109.5° |
| CB | CG | HG3 | 109.0° | 109.5° |
| CE | CD | CG | 110.2° | 109.5° |
| CD | CE | NZ | 105.6° | 109.5° |
| CE | CD | HD2 | 109.2° | 109.5° |
| CE | CD | HD3 | 109.2° | 109.5° |
| CD | CE | HE2 | 110.8° | 109.5° |
| CD | CE | HE3 | 110.8° | 109.5° |
| CG | CD | HD2 | 109.2° | 109.5° |
| CG | CD | HD3 | 109.2° | 109.4° |
| CD | CG | HG2 | 109.0° | 109.4° |
| CD | CG | HG3 | 109.0° | 109.5° |
| CE | NZ | CAL | 121.0° | 120.0° |
| NZ | CE | HE2 | 110.8° | 109.5° |
| NZ | CE | HE3 | 110.8° | 109.4° |
| CE | NZ | HZ | 119.5° | 120.0° |
| NZ | CAL | OAD | 118.3° | 120.0° |
| NZ | CAL | CAF | 121.2° | 120.0° |
| CAL | NZ | HZ | 119.5° | 120.0° |
| CAA | CAF | CAL | 111.8° | 109.5° |
| CAF | CAA | HAA | 109.5° | 109.4° |
| CAF | CAA | HAAA | 109.5° | 109.5° |
| CAF | CAA | HAAB | 109.4° | 109.5° |
| CAA | CAF | HAF | 108.7° | 109.5° |
| CAA | CAF | HAFA | 108.7° | 109.5° |
| OAD | CAL | CAF | 120.4° | 120.0° |
| CAL | CAF | HAF | 108.7° | 109.4° |
| CAL | CAF | HAFA | 108.7° | 109.5° |
| H | N | H2 | 109.4° | 111.0° |
| HB2 | CB | HB3 | 110.4° | 109.5° |
| HD2 | CD | HD3 | 109.8° | 109.5° |
| HE2 | CE | HE3 | 108.1° | 109.5° |
| HG2 | CG | HG3 | 109.9° | 109.5° |
| HAA | CAA | HAAA | 109.5° | 109.5° |
| HAA | CAA | HAAB | 109.5° | 109.5° |
| HAAA | CAA | HAAB | 109.5° | 109.5° |
| HAF | CAF | HAFA | 110.2° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O | C | CA | OXT | 177.5° | 179.7° |
| O | C | CA | N | 160.9° | 20.0° |
| O | C | CA | CB | 77.0° | 100.0° |
| O | C | CA | HA | 42.4° | 140.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| C | CA | N | CB | 121.5° | 120.0° |
| C | CA | N | HA | 119.1° | 120.0° |
| C | CA | CB | HA | 119.2° | 120.0° |
| C | CA | CB | CG | 173.4° | 175.0° |
| C | CA | N | H | 180.0° | 60.0° |
| C | CA | N | H2 | 60.0° | 176.0° |
| C | CA | CB | HB2 | 66.6° | 65.0° |
| C | CA | CB | HB3 | 53.4° | 55.0° |
| CA | C | OXT | HXT | 177.4° | 179.7° |
| OXT | C | CA | N | 21.6° | 160.3° |
| OXT | C | CA | CB | 100.6° | 79.7° |
| OXT | C | CA | HA | 140.0° | 40.3° |
| N | CA | CB | HA | 118.5° | 120.0° |
| N | CA | CB | CG | 64.2° | 64.9° |
| CA | N | H | H2 | 120.0° | 124.0° |
| N | CA | CB | HB2 | 55.8° | 55.0° |
| N | CA | CB | HB3 | 175.8° | 175.0° |
| CA | CB | CG | HB2 | 120.0° | 119.9° |
| CA | CB | CG | HB3 | 120.0° | 120.0° |
| CA | CB | CG | CD | 158.0° | 180.0° |
| CB | CA | N | H | 58.5° | 60.1° |
| CB | CA | N | H2 | 178.5° | 63.9° |
| CA | CB | HB2 | HB3 | 118.8° | 120.0° |
| CA | CB | CG | HG2 | 38.0° | 60.1° |
| CA | CB | CG | HG3 | 82.0° | 60.0° |
| CB | CG | CD | CE | 176.1° | 180.0° |
| CB | CG | CD | HG2 | 120.0° | 120.0° |
| CB | CG | CD | HG3 | 120.0° | 120.0° |
| CG | CB | CA | HA | 54.2° | 55.0° |
| CG | CB | HB2 | HB3 | 118.8° | 120.0° |
| CB | CG | CD | HD2 | 56.1° | 60.0° |
| CB | CG | CD | HD3 | 63.9° | 60.0° |
| CB | CG | HG2 | HG3 | 119.5° | 120.0° |
| CE | CD | CG | HD2 | 120.0° | 120.0° |
| CE | CD | CG | HD3 | 120.0° | 120.0° |
| CD | CE | NZ | HE2 | 120.0° | 120.0° |
| CD | CE | NZ | HE3 | 120.0° | 120.0° |
| CD | CE | NZ | CAL | 112.8° | 180.0° |
| CE | CD | HD2 | HD3 | 119.7° | 120.0° |
| CD | CE | HE2 | HE3 | 121.6° | 120.0° |
| CE | CD | CG | HG2 | 56.2° | 60.0° |
| CE | CD | CG | HG3 | 63.9° | 60.0° |
| CD | CE | NZ | HZ | 67.2° | 0.0° |
| CG | CD | CE | NZ | 174.3° | 180.0° |
| CD | CG | CB | HB2 | 82.0° | 60.0° |
| CD | CG | CB | HB3 | 38.0° | 60.0° |
| CG | CD | HD2 | HD3 | 119.7° | 120.0° |
| CG | CD | CE | HE2 | 54.3° | 60.0° |
| CG | CD | CE | HE3 | 65.6° | 60.0° |
| CD | CG | HG2 | HG3 | 119.5° | 120.0° |
| CE | NZ | CAL | HZ | 180.0° | 180.0° |
| CE | NZ | CAL | OAD | 1.6° | 0.1° |
| CE | NZ | CAL | CAF | 178.7° | 180.0° |
| NZ | CE | CD | HD2 | 54.4° | 60.0° |
| NZ | CE | CD | HD3 | 65.7° | 60.0° |
| NZ | CE | HE2 | HE3 | 121.6° | 120.0° |
| NZ | CAL | CAF | CAA | 8.9° | 180.0° |
| NZ | CAL | OAD | CAF | 179.6° | 179.9° |
| CAL | NZ | CE | HE2 | 127.2° | 59.9° |
| CAL | NZ | CE | HE3 | 7.2° | 60.0° |
| NZ | CAL | CAF | HAF | 111.1° | 60.0° |
| NZ | CAL | CAF | HAFA | 128.9° | 59.9° |
| CAA | CAF | CAL | OAD | 170.7° | 0.1° |
| CAA | CAF | CAL | HAF | 120.0° | 120.0° |
| CAA | CAF | CAL | HAFA | 120.0° | 120.1° |
| CAF | CAA | HAA | HAAA | 120.0° | 120.0° |
| CAF | CAA | HAA | HAAB | 120.0° | 120.0° |
| CAF | CAA | HAAA | HAAB | 119.9° | 120.0° |
| CAA | CAF | HAF | HAFA | 119.0° | 120.0° |
| OAD | CAL | NZ | HZ | 178.4° | 179.9° |
| OAD | CAL | CAF | HAF | 69.3° | 120.1° |
| OAD | CAL | CAF | HAFA | 50.7° | 120.0° |
| CAF | CAL | NZ | HZ | 1.3° | 0.0° |
| CAL | CAF | CAA | HAA | 180.0° | 60.0° |
| CAL | CAF | CAA | HAAA | 60.0° | 60.0° |
| CAL | CAF | CAA | HAAB | 60.0° | 180.0° |
| CAL | CAF | HAF | HAFA | 119.0° | 120.0° |
| H | N | CA | HA | 60.9° | 180.0° |
| H2 | N | CA | HA | 59.1° | 56.0° |
| HA | CA | CB | HB2 | 174.2° | 175.0° |
| HA | CA | CB | HB3 | 65.8° | 65.0° |
| HB2 | CB | CG | HG2 | 158.0° | NaN° |
| HB2 | CB | CG | HG3 | 38.0° | 60.0° |
| HB3 | CB | CG | HG2 | 82.0° | 60.0° |
| HB3 | CB | CG | HG3 | 158.0° | 180.0° |
| HD2 | CD | CE | HE2 | 65.6° | 60.0° |
| HD2 | CD | CE | HE3 | 174.4° | 180.0° |
| HD2 | CD | CG | HG2 | 63.8° | 60.0° |
| HD2 | CD | CG | HG3 | 176.2° | 180.0° |
| HD3 | CD | CE | HE2 | 174.3° | 180.0° |
| HD3 | CD | CE | HE3 | 54.3° | 60.0° |
| HD3 | CD | CG | HG2 | 176.1° | 180.0° |
| HD3 | CD | CG | HG3 | 56.1° | 60.0° |
| HE2 | CE | NZ | HZ | 52.8° | 120.0° |
| HE3 | CE | NZ | HZ | 172.8° | 120.0° |
| HAA | CAA | HAAA | HAAB | 120.0° | 120.0° |
| HAA | CAA | CAF | HAF | 60.0° | 60.0° |
| HAA | CAA | CAF | HAFA | 60.0° | 180.0° |
| HAAA | CAA | CAF | HAF | 60.0° | 180.0° |
| HAAA | CAA | CAF | HAFA | 180.0° | 60.0° |
| HAAB | CAA | CAF | HAF | 180.0° | 60.0° |
| HAAB | CAA | CAF | HAFA | 60.0° | 60.0° |
