Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.50Å1.51Å
C1C6sing1.50Å1.52Å
C1C7sing1.51Å1.55Å
C1C8sing1.53Å1.54Å
C2C3doub1.30Å1.35Å
C2H2sing1.08Å1.10Å
C3C4sing1.50Å1.50Å
C3H3sing1.08Å1.10Å
C4O4sing1.43Å1.40Å
C4C5sing1.50Å1.52Å
C4H4sing1.09Å1.87Å
O4HO4sing0.97Å0.95Å
C5C6doub1.30Å1.36Å
C5H5sing1.08Å1.10Å
C6H6sing1.08Å1.10Å
C7O71doub1.21Å1.23Å
C7O72sing1.34Å1.24Å
O72HO72sing0.97Å0.95Å
C8C1'sing1.51Å1.52Å
C8H81sing1.09Å1.11Å
C8H82sing1.09Å1.11Å
C1'O1'doub1.21Å1.20Å
C1'C2'sing1.49Å1.52Å
C2'O'Ldoub1.21Å1.22Å
C2'O'Msing1.35Å1.23Å
O'MHO2'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6107.1°111.2°
C2C1C7110.7°109.1°
C2C1C8113.0°109.1°
C1C2C3123.3°122.8°
C1C2H2124.1°118.6°
C6C1C7114.0°109.1°
C6C1C8113.7°109.2°
C1C6C5122.3°122.8°
C1C6H6124.7°118.6°
C7C1C898.2°109.1°
C1C7O71118.6°120.0°
C1C7O72120.7°120.0°
C1C8C1'117.3°109.5°
C1C8H81109.3°109.5°
C1C8H82109.4°109.5°
C3C2H2112.5°118.6°
C2C3C4121.5°122.9°
C2C3H3114.1°118.6°
C4C3H3124.4°118.6°
C3C4O4106.8°109.2°
C3C4C5110.7°111.2°
C3C4H4135.1°109.1°
O4C4C5110.1°109.1°
O4C4H429.9°109.1°
C4O4HO4106.8°106.9°
C5C4H4100.4°109.1°
C4C5C6121.8°122.8°
C4C5H5124.7°118.6°
C6C5H5113.5°118.6°
C5C6H6113.0°118.6°
O71C7O72120.7°120.0°
C7O72HO72120.7°120.0°
C1'C8H81109.4°109.4°
C1'C8H82109.4°109.5°
C8C1'O1'119.9°120.0°
C8C1'C2'117.3°120.1°
H81C8H82100.8°109.4°
O1'C1'C2'122.4°119.9°
C1'C2'O'L118.6°119.9°
C1'C2'O'M119.8°120.1°
O'LC2'O'M121.6°120.0°
C2'O'MHO2'119.8°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6C7122.8°120.4°
C2C1C6C8125.6°120.4°
C2C1C7C8118.5°119.1°
C1C2C3H2180.0°179.9°
C1C2C3C47.5°0.1°
C1C2C3H3172.5°180.0°
C2C1C6C531.8°19.5°
C2C1C6H6148.2°160.5°
C2C1C7O71137.1°120.0°
C2C1C7O7242.9°60.0°
C2C1C8C1'61.9°179.9°
C2C1C8H8163.4°60.0°
C2C1C8H82172.9°60.0°
C6C1C7C8120.6°119.2°
C6C1C2C333.6°19.5°
C6C1C2H2146.4°160.5°
C1C6C5C44.7°0.0°
C1C6C5H6180.0°180.0°
C1C6C5H5175.4°180.0°
C6C1C7O7116.2°118.4°
C6C1C7O72163.7°61.7°
C6C1C8C1'60.5°58.4°
C6C1C8H81174.2°178.3°
C6C1C8H8264.7°61.7°
C7C1C2C3158.4°139.9°
C7C1C2H221.6°40.0°
C7C1C6C5154.6°139.9°
C7C1C6H625.3°40.1°
C1C7O71O72180.0°180.0°
C1C7O72HO72179.9°180.0°
C7C1C8C1'178.6°60.8°
C7C1C8H8153.4°59.2°
C7C1C8H8256.1°179.2°
C8C1C2C392.5°101.0°
C8C1C2H287.5°79.1°
C8C1C6C593.9°100.9°
C8C1C6H686.2°79.1°
C8C1C7O71104.4°0.8°
C8C1C7O7275.6°179.1°
C1C8C1'H81125.2°120.0°
C1C8C1'H82125.3°120.0°
C1C8H81H82115.1°120.0°
C1C8C1'O1'82.5°0.1°
C1C8C1'C2'90.7°180.0°
C2C3C4H3179.9°179.9°
C2C3C4O4141.7°100.9°
C2C3C4C521.9°19.6°
C2C3C4H4152.8°140.0°
H2C2C3C4172.4°180.0°
H2C2C3H37.5°0.0°
C3C4O4C5120.2°121.7°
C3C4O4H4164.2°119.2°
C3C4C5H4147.2°120.4°
C3C4O4HO4180.0°180.0°
C3C4C5C623.2°19.6°
C3C4C5H5156.7°160.4°
H3C3C4O438.3°79.1°
H3C3C4C5158.1°160.4°
H3C3C4H427.2°40.1°
O4C4C5H429.4°119.1°
O4C4C5C6141.0°100.9°
O4C4C5H538.9°79.0°
C5C4O4HO459.8°58.3°
C4C5C6H5179.9°180.0°
C4C5C6H6175.3°180.0°
H4C4O4HO415.8°60.8°
H4C4C5C6170.4°140.0°
H4C4C5H59.5°40.0°
H5C5C6H64.7°0.0°
O71C7O72HO720.1°0.0°
C1'C8H81H82115.2°120.0°
C8C1'O1'C2'172.9°179.9°
C8C1'C2'O'L154.9°0.1°
C8C1'C2'O'M25.3°180.0°
H81C8C1'O1'42.8°120.1°
H81C8C1'C2'144.0°60.0°
H82C8C1'O1'152.3°120.0°
H82C8C1'C2'34.5°59.9°
O1'C1'C2'O'L18.1°179.9°
O1'C1'C2'O'M161.7°0.1°
C1'C2'O'LO'M179.8°180.0°
C1'C2'O'MHO2'180.0°180.0°
O'LC2'O'MHO2'0.2°0.0°

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon