Obsolete: PR5
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | doub | 1.50Å | 1.49Å | |
| P | OP2 | sing | 1.62Å | 1.48Å | |
| P | O5' | sing | 1.62Å | 1.60Å | |
| P | OP3 | sing | 1.62Å | 44.02Å | |
| OP2 | HOP2 | sing | 0.98Å | 0.95Å | |
| O5' | C5' | sing | 1.42Å | 1.43Å | |
| C5' | C4' | sing | 1.52Å | 1.51Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.44Å | 1.46Å | |
| C4' | C3' | sing | 1.52Å | 1.53Å | |
| C4' | H4' | sing | 1.10Å | 1.10Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C1' | C2' | sing | 1.53Å | 1.52Å | |
| C1' | N9 | sing | 1.46Å | 1.45Å | |
| C1' | H1' | sing | 1.10Å | 1.10Å | |
| C3' | O3' | sing | 1.41Å | 1.42Å | |
| C3' | C2' | sing | 1.52Å | 1.53Å | |
| C3' | H3' | sing | 1.10Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| N9 | C4 | sing | 1.37Å | 1.36Å | Aromatic |
| N9 | C8 | sing | 1.37Å | 1.36Å | Aromatic |
| C4 | C5 | doub | 1.39Å | 1.41Å | Aromatic |
| C4 | N3 | sing | 1.34Å | 1.34Å | Aromatic |
| C8 | N7 | doub | 1.32Å | 1.31Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| N7 | C5 | sing | 1.37Å | 1.36Å | Aromatic |
| C5 | C6 | sing | 1.39Å | 1.40Å | Aromatic |
| C6 | N1 | doub | 1.35Å | 1.34Å | Aromatic |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| N1 | C2 | sing | 1.35Å | 1.33Å | Aromatic |
| C2 | N3 | doub | 1.35Å | 1.32Å | Aromatic |
| C2 | H3 | sing | 1.08Å | 1.08Å | |
| OP3 | HOP3 | sing | 0.98Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 119.4° | 115.3° |
| OP1 | P | O5' | 109.8° | 115.0° |
| OP1 | P | OP3 | 9.7° | 115.0° |
| OP2 | P | O5' | 107.1° | 103.7° |
| OP2 | P | OP3 | 110.2° | 103.3° |
| P | OP2 | HOP2 | 109.5° | 118.9° |
| O5' | P | OP3 | 112.1° | 102.9° |
| P | O5' | C5' | 121.9° | 118.5° |
| P | OP3 | HOP3 | 9.7° | 119.0° |
| O5' | C5' | C4' | 109.2° | 108.7° |
| O5' | C5' | H5' | 109.6° | 109.1° |
| O5' | C5' | H5'' | 109.6° | 109.2° |
| C4' | C5' | H5' | 109.7° | 110.1° |
| C4' | C5' | H5'' | 109.6° | 110.1° |
| C5' | C4' | O4' | 108.5° | 109.8° |
| C5' | C4' | C3' | 111.8° | 113.5° |
| C5' | C4' | H4' | 107.4° | 108.7° |
| H5' | C5' | H5'' | 109.2° | 109.6° |
| O4' | C4' | C3' | 105.8° | 105.2° |
| O4' | C4' | H4' | 113.3° | 108.3° |
| C4' | O4' | C1' | 108.8° | 108.3° |
| C3' | C4' | H4' | 110.1° | 111.2° |
| C4' | C3' | O3' | 108.0° | 112.2° |
| C4' | C3' | C2' | 104.0° | 102.2° |
| C4' | C3' | H3' | 114.8° | 110.2° |
| O4' | C1' | C2' | 109.1° | 107.6° |
| O4' | C1' | N9 | 114.8° | 109.4° |
| O4' | C1' | H1' | 108.1° | 108.2° |
| C2' | C1' | N9 | 114.8° | 113.7° |
| C2' | C1' | H1' | 108.1° | 112.6° |
| C1' | C2' | C3' | 100.0° | 102.9° |
| C1' | C2' | O2' | 111.7° | 109.3° |
| C1' | C2' | H2' | 116.1° | 114.0° |
| N9 | C1' | H1' | 101.4° | 105.2° |
| C1' | N9 | C4 | 122.1° | 126.9° |
| C1' | N9 | C8 | 129.4° | 126.1° |
| O3' | C3' | C2' | 112.1° | 113.5° |
| O3' | C3' | H3' | 107.2° | 109.0° |
| C3' | O3' | HO3' | 109.5° | 106.4° |
| C2' | C3' | H3' | 110.9° | 109.5° |
| C3' | C2' | O2' | 114.6° | 111.2° |
| C3' | C2' | H2' | 113.2° | 112.6° |
| O2' | C2' | H2' | 101.9° | 106.9° |
| C2' | O2' | HO2' | 109.5° | 107.3° |
| C4 | N9 | C8 | 108.5° | 107.0° |
| N9 | C4 | C5 | 106.1° | 105.3° |
| N9 | C4 | N3 | 134.1° | 127.5° |
| N9 | C8 | N7 | 109.2° | 112.2° |
| N9 | C8 | H8 | 125.4° | 122.2° |
| C5 | C4 | N3 | 119.8° | 127.2° |
| C4 | C5 | N7 | 106.8° | 110.7° |
| C4 | C5 | C6 | 117.8° | 116.9° |
| C4 | N3 | C2 | 120.4° | 110.5° |
| N7 | C8 | H8 | 125.4° | 125.6° |
| C8 | N7 | C5 | 109.4° | 104.9° |
| N7 | C5 | C6 | 135.5° | 132.4° |
| C5 | C6 | N1 | 118.8° | 119.1° |
| C5 | C6 | H6 | 120.6° | 124.0° |
| N1 | C6 | H6 | 120.6° | 116.9° |
| C6 | N1 | C2 | 121.5° | 117.5° |
| N1 | C2 | N3 | 121.7° | 128.8° |
| N1 | C2 | H3 | 119.1° | 115.5° |
| N3 | C2 | H3 | 119.1° | 115.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | O5' | 125.5° | 126.6° |
| OP1 | P | OP2 | OP3 | 3.3° | 126.2° |
| OP1 | P | O5' | OP3 | 10.1° | 125.8° |
| OP1 | P | OP2 | HOP2 | 69.4° | 48.7° |
| OP1 | P | O5' | C5' | 165.4° | 180.0° |
| OP1 | P | OP3 | HOP3 | 179.9° | 48.0° |
| OP2 | P | O5' | OP3 | 121.0° | 107.4° |
| OP2 | P | O5' | C5' | 34.3° | 53.2° |
| OP2 | P | OP3 | HOP3 | 17.6° | 78.5° |
| O5' | P | OP2 | HOP2 | 56.1° | 175.4° |
| P | O5' | C5' | C4' | 137.1° | 180.0° |
| P | O5' | C5' | H5' | 16.9° | 59.9° |
| P | O5' | C5' | H5'' | 103.0° | 59.9° |
| O5' | P | OP3 | HOP3 | 101.6° | 173.8° |
| OP3 | P | OP2 | HOP2 | 66.1° | 77.5° |
| OP3 | P | O5' | C5' | 155.3° | 54.2° |
| O5' | C5' | C4' | H5' | 120.1° | 119.5° |
| O5' | C5' | C4' | H5'' | 120.0° | 119.6° |
| O5' | C5' | H5' | H5'' | 120.1° | 119.5° |
| O5' | C5' | C4' | O4' | 156.0° | 62.1° |
| O5' | C5' | C4' | C3' | 87.7° | 179.5° |
| O5' | C5' | C4' | H4' | 33.2° | 56.2° |
| C4' | C5' | H5' | H5'' | 120.1° | 121.3° |
| C5' | C4' | O4' | C3' | 120.1° | 122.5° |
| C5' | C4' | O4' | H4' | 119.2° | 118.5° |
| C5' | C4' | C3' | H4' | 119.3° | 122.9° |
| C5' | C4' | O4' | C1' | 114.9° | 148.9° |
| C5' | C4' | C3' | O3' | 148.0° | 80.9° |
| C5' | C4' | C3' | C2' | 92.8° | 157.1° |
| C5' | C4' | C3' | H3' | 28.6° | 40.7° |
| H5' | C5' | C4' | O4' | 83.8° | 57.4° |
| H5' | C5' | C4' | C3' | 32.4° | 60.1° |
| H5' | C5' | C4' | H4' | 153.3° | 175.7° |
| H5'' | C5' | C4' | O4' | 36.1° | 178.3° |
| H5'' | C5' | C4' | C3' | 152.3° | 60.9° |
| H5'' | C5' | C4' | H4' | 86.8° | 63.4° |
| O4' | C4' | C3' | H4' | 122.8° | 117.0° |
| C4' | O4' | C1' | C2' | 17.5° | 5.0° |
| C4' | O4' | C1' | N9 | 147.9° | 129.0° |
| C4' | O4' | C1' | H1' | 99.8° | 116.9° |
| O4' | C4' | C3' | O3' | 94.1° | 159.0° |
| O4' | C4' | C3' | C2' | 25.2° | 37.0° |
| O4' | C4' | C3' | H3' | 146.5° | 79.3° |
| C3' | C4' | O4' | C1' | 5.1° | 26.4° |
| C4' | C3' | C2' | C1' | 33.6° | 32.8° |
| C4' | C3' | O3' | C2' | 114.0° | 115.2° |
| C4' | C3' | O3' | H3' | 124.1° | 122.4° |
| C4' | C3' | C2' | H3' | 123.9° | 116.9° |
| C4' | C3' | O3' | HO3' | 54.9° | 33.7° |
| C4' | C3' | C2' | O2' | 153.1° | 84.1° |
| C4' | C3' | C2' | H2' | 90.6° | 156.0° |
| H4' | C4' | O4' | C1' | 125.8° | 92.6° |
| H4' | C4' | C3' | O3' | 28.7° | 42.0° |
| H4' | C4' | C3' | C2' | 147.9° | 79.9° |
| H4' | C4' | C3' | H3' | 90.7° | 163.7° |
| O4' | C1' | C2' | N9 | 130.4° | 121.3° |
| O4' | C1' | C2' | H1' | 117.3° | 119.2° |
| O4' | C1' | N9 | H1' | 116.2° | 116.0° |
| O4' | C1' | C2' | C3' | 32.2° | 18.1° |
| O4' | C1' | C2' | O2' | 153.9° | 100.1° |
| O4' | C1' | C2' | H2' | 90.0° | 140.4° |
| O4' | C1' | N9 | C4 | 106.7° | 146.1° |
| O4' | C1' | N9 | C8 | 73.5° | 33.9° |
| C2' | C1' | N9 | H1' | 116.2° | 123.6° |
| C1' | C2' | C3' | O3' | 82.9° | 153.8° |
| C1' | C2' | C3' | O2' | 119.6° | 116.8° |
| C1' | C2' | C3' | H2' | 124.1° | 123.2° |
| C1' | C2' | C3' | H3' | 157.4° | 84.1° |
| C1' | C2' | O2' | H2' | 124.5° | 123.8° |
| C1' | C2' | O2' | HO2' | 91.9° | 54.7° |
| C2' | C1' | N9 | C4 | 125.8° | 93.5° |
| C2' | C1' | N9 | C8 | 54.1° | 86.4° |
| N9 | C1' | C2' | C3' | 162.5° | 103.2° |
| N9 | C1' | C2' | O2' | 75.8° | 138.5° |
| N9 | C1' | C2' | H2' | 40.4° | 19.0° |
| C1' | N9 | C4 | C8 | 179.9° | 179.9° |
| C1' | N9 | C4 | C5 | 179.9° | 180.0° |
| C1' | N9 | C4 | N3 | 0.0° | 0.1° |
| C1' | N9 | C8 | N7 | 179.9° | 179.9° |
| C1' | N9 | C8 | H8 | 0.1° | 0.0° |
| H1' | C1' | C2' | C3' | 85.2° | 137.3° |
| H1' | C1' | C2' | O2' | 36.6° | 19.1° |
| H1' | C1' | C2' | H2' | 152.7° | 100.5° |
| H1' | C1' | N9 | C4 | 9.5° | 30.1° |
| H1' | C1' | N9 | C8 | 170.3° | 150.0° |
| O3' | C3' | C2' | H3' | 119.7° | 122.1° |
| O3' | C3' | C2' | O2' | 36.7° | 36.9° |
| O3' | C3' | C2' | H2' | 153.0° | 83.1° |
| C2' | C3' | O3' | HO3' | 168.9° | 148.9° |
| C3' | C2' | O2' | H2' | 122.7° | 123.3° |
| C3' | C2' | O2' | HO2' | 20.9° | 167.5° |
| H3' | C3' | O3' | HO3' | 69.2° | 88.7° |
| H3' | C3' | C2' | O2' | 83.0° | 159.0° |
| H3' | C3' | C2' | H2' | 33.3° | 39.0° |
| H2' | C2' | O2' | HO2' | 143.6° | 69.2° |
| N9 | C4 | C5 | N3 | 180.0° | 179.9° |
| C4 | N9 | C8 | N7 | 0.1° | 0.0° |
| C4 | N9 | C8 | H8 | 179.9° | 180.0° |
| N9 | C4 | C5 | N7 | 0.0° | 0.1° |
| N9 | C4 | C5 | C6 | 180.0° | 180.0° |
| N9 | C4 | N3 | C2 | 179.9° | 180.0° |
| C8 | N9 | C4 | C5 | 0.1° | 0.0° |
| C8 | N9 | C4 | N3 | 179.9° | 180.0° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| C4 | C5 | N7 | C8 | 0.0° | 0.1° |
| C4 | C5 | N7 | C6 | 180.0° | 179.9° |
| C4 | C5 | C6 | N1 | 0.0° | 0.0° |
| C4 | C5 | C6 | H6 | 179.9° | 180.0° |
| C5 | C4 | N3 | C2 | 0.1° | 0.1° |
| N3 | C4 | C5 | N7 | 179.9° | 180.0° |
| N3 | C4 | C5 | C6 | 0.0° | 0.1° |
| C4 | N3 | C2 | N1 | 0.1° | 0.1° |
| C4 | N3 | C2 | H3 | 179.9° | 180.0° |
| C8 | N7 | C5 | C6 | 180.0° | 180.0° |
| H8 | C8 | N7 | C5 | 179.9° | 180.0° |
| N7 | C5 | C6 | N1 | 180.0° | 179.9° |
| N7 | C5 | C6 | H6 | 0.0° | 0.1° |
| C5 | C6 | N1 | H6 | 180.0° | 180.0° |
| C5 | C6 | N1 | C2 | 0.1° | 0.0° |
| C6 | N1 | C2 | N3 | 0.0° | 0.0° |
| C6 | N1 | C2 | H3 | 180.0° | 180.0° |
| H6 | C6 | N1 | C2 | 179.9° | 180.0° |
| N1 | C2 | N3 | H3 | 180.0° | 179.9° |
