Obsolete: PR0
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.48Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | C | sing | 1.53Å | 1.57Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.43Å | 1.41Å | |
C | CM | sing | 1.53Å | 1.54Å | |
C | HC | sing | 1.09Å | 1.10Å | |
OXT | HOR | sing | 0.97Å | 0.95Å | |
CB | CG | sing | 1.51Å | 1.50Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | CD1 | doub | 1.38Å | 1.39Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.40Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | doub | 1.38Å | 1.40Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | CZ | doub | 1.38Å | 1.38Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | CZ | sing | 1.38Å | 1.40Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CZ | HZ | sing | 1.08Å | 1.08Å | |
CM | HM1 | sing | 1.09Å | 1.10Å | |
CM | HM2 | sing | 1.09Å | 1.10Å | |
CM | HM3 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | C | 112.6° | 109.5° |
N | CA | CB | 110.3° | 109.4° |
N | CA | HA | 106.7° | 109.5° |
H | N | H2 | 109.5° | 111.0° |
C | CA | CB | 109.3° | 109.5° |
C | CA | HA | 107.8° | 109.5° |
CA | C | OXT | 110.0° | 109.5° |
CA | C | CM | 111.4° | 109.5° |
CA | C | HC | 107.4° | 109.5° |
CB | CA | HA | 110.1° | 109.5° |
CA | CB | CG | 113.6° | 109.5° |
CA | CB | HB2 | 108.1° | 109.5° |
CA | CB | HB3 | 108.1° | 109.4° |
OXT | C | CM | 108.1° | 109.5° |
OXT | C | HC | 110.7° | 109.5° |
C | OXT | HOR | 109.5° | 114.0° |
CM | C | HC | 109.3° | 109.5° |
C | CM | HM1 | 109.5° | 109.5° |
C | CM | HM2 | 109.5° | 109.5° |
C | CM | HM3 | 109.5° | 109.5° |
CG | CB | HB2 | 108.1° | 109.5° |
CG | CB | HB3 | 108.1° | 109.5° |
CB | CG | CD1 | 120.6° | 120.0° |
CB | CG | CD2 | 120.7° | 120.1° |
HB2 | CB | HB3 | 110.8° | 109.5° |
CD1 | CG | CD2 | 118.6° | 120.0° |
CG | CD1 | CE1 | 121.3° | 120.0° |
CG | CD1 | HD1 | 119.3° | 120.0° |
CG | CD2 | CE2 | 120.6° | 120.1° |
CG | CD2 | HD2 | 119.7° | 119.9° |
CE1 | CD1 | HD1 | 119.4° | 120.0° |
CD1 | CE1 | CZ | 119.9° | 120.0° |
CD1 | CE1 | HE1 | 120.0° | 120.0° |
CE2 | CD2 | HD2 | 119.7° | 120.0° |
CD2 | CE2 | CZ | 119.8° | 120.0° |
CD2 | CE2 | HE2 | 120.1° | 120.0° |
CZ | CE1 | HE1 | 120.1° | 120.0° |
CE1 | CZ | CE2 | 119.9° | 120.0° |
CE1 | CZ | HZ | 120.1° | 120.1° |
CZ | CE2 | HE2 | 120.1° | 120.0° |
CE2 | CZ | HZ | 120.0° | 120.0° |
HM1 | CM | HM2 | 109.5° | 109.4° |
HM1 | CM | HM3 | 109.4° | 109.4° |
HM2 | CM | HM3 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | C | CB | 123.0° | 120.0° |
N | CA | C | HA | 117.4° | 120.0° |
N | CA | CB | HA | 117.5° | 120.0° |
N | CA | C | OXT | 177.6° | 180.0° |
N | CA | C | CM | 57.8° | 60.0° |
N | CA | C | HC | 61.8° | 60.0° |
N | CA | CB | CG | 72.4° | 65.0° |
N | CA | CB | HB2 | 47.5° | 55.0° |
N | CA | CB | HB3 | 167.6° | 175.0° |
H | N | CA | C | 180.0° | 64.0° |
H | N | CA | CB | 57.6° | 176.0° |
H | N | CA | HA | 62.0° | 56.1° |
H2 | N | CA | C | 60.0° | 60.0° |
H2 | N | CA | CB | 177.6° | 60.0° |
H2 | N | CA | HA | 58.0° | 180.0° |
C | CA | CB | HA | 118.2° | 120.0° |
CA | C | OXT | CM | 121.8° | 120.0° |
CA | C | OXT | HC | 118.5° | 120.0° |
CA | C | CM | HC | 118.5° | 120.0° |
CA | C | OXT | HOR | 180.0° | 60.0° |
C | CA | CB | CG | 163.3° | 175.0° |
C | CA | CB | HB2 | 76.8° | 65.0° |
C | CA | CB | HB3 | 43.3° | 55.0° |
CA | C | CM | HM1 | 180.0° | 60.0° |
CA | C | CM | HM2 | 60.0° | 180.0° |
CA | C | CM | HM3 | 60.0° | 60.0° |
CB | CA | C | OXT | 59.4° | 60.0° |
CB | CA | C | CM | 179.3° | 179.9° |
CB | CA | C | HC | 61.1° | 60.0° |
CA | CB | CG | HB2 | 120.0° | 120.0° |
CA | CB | CG | HB3 | 120.0° | 119.9° |
CA | CB | HB2 | HB3 | 118.3° | 119.9° |
CA | CB | CG | CD1 | 77.3° | 90.0° |
CA | CB | CG | CD2 | 98.8° | 90.2° |
HA | CA | C | OXT | 60.2° | 60.0° |
HA | CA | C | CM | 59.6° | 60.0° |
HA | CA | C | HC | 179.2° | 180.0° |
HA | CA | CB | CG | 45.1° | 55.0° |
HA | CA | CB | HB2 | 165.0° | 175.0° |
HA | CA | CB | HB3 | 74.9° | 65.0° |
OXT | C | CM | HC | 120.6° | 120.0° |
OXT | C | CM | HM1 | 59.0° | 60.0° |
OXT | C | CM | HM2 | 179.1° | 60.0° |
OXT | C | CM | HM3 | 61.0° | 180.0° |
CM | C | OXT | HOR | 58.2° | 60.0° |
C | CM | HM1 | HM2 | 120.0° | 120.0° |
C | CM | HM1 | HM3 | 120.0° | 120.0° |
C | CM | HM2 | HM3 | 120.0° | 120.1° |
HC | C | OXT | HOR | 61.5° | 180.0° |
HC | C | CM | HM1 | 61.5° | 180.0° |
HC | C | CM | HM2 | 58.5° | 60.0° |
HC | C | CM | HM3 | 178.5° | 60.0° |
CG | CB | HB2 | HB3 | 118.3° | 120.0° |
CB | CG | CD1 | CD2 | 176.2° | 179.8° |
CB | CG | CD1 | CE1 | 175.9° | 180.0° |
CB | CG | CD1 | HD1 | 4.1° | 0.0° |
CB | CG | CD2 | CE2 | 175.7° | 180.0° |
CB | CG | CD2 | HD2 | 4.3° | 0.0° |
HB2 | CB | CG | CD1 | 162.7° | 30.0° |
HB2 | CB | CG | CD2 | 21.2° | 149.8° |
HB3 | CB | CG | CD1 | 42.7° | 150.1° |
HB3 | CB | CG | CD2 | 141.2° | 29.7° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.5° | 0.2° |
CD1 | CG | CD2 | HD2 | 179.5° | 179.7° |
CG | CD1 | CE1 | CZ | 0.1° | 0.0° |
CG | CD1 | CE1 | HE1 | 179.9° | 180.0° |
CD2 | CG | CD1 | CE1 | 0.3° | 0.2° |
CD2 | CG | CD1 | HD1 | 179.7° | 179.8° |
CG | CD2 | CE2 | HD2 | 180.0° | 180.0° |
CG | CD2 | CE2 | CZ | 0.4° | 0.0° |
CG | CD2 | CE2 | HE2 | 179.6° | 179.9° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.2° | 0.2° |
CD1 | CE1 | CZ | HZ | 179.8° | 180.0° |
HD1 | CD1 | CE1 | CZ | 179.9° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 0.1° | 0.0° |
CD2 | CE2 | CZ | CE1 | 0.0° | 0.2° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.9° |
CD2 | CE2 | CZ | HZ | 180.0° | 180.0° |
HD2 | CD2 | CE2 | CZ | 179.6° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 0.4° | 0.1° |
CE1 | CZ | CE2 | HZ | 180.0° | 179.8° |
CE1 | CZ | CE2 | HE2 | 180.0° | 179.7° |
HE1 | CE1 | CZ | CE2 | 179.8° | 179.8° |
HE1 | CE1 | CZ | HZ | 0.2° | 0.0° |
HE2 | CE2 | CZ | HZ | 0.0° | 0.1° |
HM1 | CM | HM2 | HM3 | 120.0° | 120.0° |