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Summary Geometry Related PDB entries

POP

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
P1	O1	doub	1.54Å	1.54Å
P1	O2	sing	1.61Å	1.49Å
P1	O3	sing	1.55Å	1.43Å
P1	O	sing	1.61Å	1.64Å
O2	HO2	sing	0.97Å	0.95Å
O	P2	sing	1.61Å	1.64Å
P2	O4	doub	1.54Å	1.55Å
P2	O5	sing	1.61Å	1.53Å
P2	O6	sing	1.55Å	1.46Å
O5	HO5	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	P1	O2	112.3°	109.5°
O1	P1	O3	112.0°	109.5°
O1	P1	O	104.0°	109.5°
O2	P1	O3	114.5°	109.5°
O2	P1	O	104.3°	109.5°
P1	O2	HO2	112.2°	106.8°
O3	P1	O	108.9°	109.4°
P1	O	P2	123.1°	106.8°
O	P2	O4	102.4°	109.5°
O	P2	O5	103.4°	109.5°
O	P2	O6	109.7°	109.5°
O4	P2	O5	111.3°	109.5°
O4	P2	O6	111.6°	109.5°
O5	P2	O6	117.1°	109.4°
P2	O5	HO5	103.4°	106.8°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	P1	O2	O3	129.1°	120.0°
O1	P1	O2	O	112.0°	120.0°
O1	P1	O3	O	114.5°	120.0°
O1	P1	O2	HO2	180.0°	60.0°
O1	P1	O	P2	64.1°	80.0°
O2	P1	O3	O	116.3°	120.0°
O2	P1	O	P2	178.1°	160.0°
O3	P1	O2	HO2	50.9°	60.0°
O3	P1	O	P2	55.5°	40.1°
O	P1	O2	HO2	68.0°	180.0°
P1	O	P2	O4	171.5°	75.0°
P1	O	P2	O5	72.7°	165.0°
P1	O	P2	O6	52.9°	45.1°
O	P2	O4	O5	109.9°	120.0°
O	P2	O4	O6	117.3°	120.0°
O	P2	O5	O6	120.8°	120.0°
O	P2	O5	HO5	180.0°	180.0°
O4	P2	O5	O6	130.0°	119.9°
O4	P2	O5	HO5	70.7°	60.0°
O6	P2	O5	HO5	59.2°	60.0°

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