POM
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.48Å | 1.48Å | |
N | CD | sing | 1.48Å | 1.47Å | |
N | H | sing | 1.01Å | 1.02Å | |
CA | C | sing | 1.51Å | 1.54Å | |
CA | CB | sing | 1.55Å | 1.51Å | |
CA | HA | sing | 1.09Å | 1.12Å | |
C | O | doub | 1.21Å | 1.25Å | |
C | OXT | sing | 1.34Å | 1.35Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
CB | CG | sing | 1.52Å | 1.50Å | |
CB | HB2 | sing | 1.09Å | 1.11Å | |
CB | HB3 | sing | 1.09Å | 1.12Å | |
CG | CD | sing | 1.52Å | 1.55Å | |
CG | OG | doub | 1.21Å | 1.23Å | |
CD | CD1 | sing | 1.53Å | 1.53Å | |
CD | HD | sing | 1.09Å | 1.11Å | |
CD1 | HD11 | sing | 1.09Å | 1.11Å | |
CD1 | HD12 | sing | 1.09Å | 1.11Å | |
CD1 | HD13 | sing | 1.09Å | 1.12Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | CD | 113.7° | 105.4° |
CA | N | H | 110.6° | 106.7° |
N | CA | C | 112.4° | 110.8° |
N | CA | CB | 105.2° | 102.8° |
N | CA | HA | 111.5° | 110.8° |
CD | N | H | 110.7° | 106.6° |
N | CD | CG | 101.4° | 107.5° |
N | CD | CD1 | 112.4° | 109.9° |
N | CD | HD | 114.3° | 109.9° |
C | CA | CB | 112.3° | 110.9° |
C | CA | HA | 104.2° | 110.6° |
CA | C | O | 120.3° | 120.0° |
CA | C | OXT | 117.7° | 120.1° |
CB | CA | HA | 111.5° | 110.7° |
CA | CB | CG | 105.9° | 103.2° |
CA | CB | HB2 | 113.6° | 110.7° |
CA | CB | HB3 | 113.6° | 110.7° |
O | C | OXT | 121.8° | 119.9° |
C | OXT | HXT | 117.8° | 120.1° |
CG | CB | HB2 | 113.6° | 110.7° |
CG | CB | HB3 | 113.6° | 110.5° |
CB | CG | CD | 111.0° | 105.7° |
CB | CG | OG | 125.6° | 127.1° |
HB2 | CB | HB3 | 96.8° | 110.8° |
CD | CG | OG | 123.4° | 127.2° |
CG | CD | CD1 | 113.5° | 109.9° |
CG | CD | HD | 113.2° | 109.8° |
CD1 | CD | HD | 102.5° | 109.8° |
CD | CD1 | HD11 | 112.4° | 109.5° |
CD | CD1 | HD12 | 111.1° | 109.6° |
CD | CD1 | HD13 | 111.1° | 109.4° |
HD11 | CD1 | HD12 | 111.2° | 109.5° |
HD11 | CD1 | HD13 | 111.2° | 109.4° |
HD12 | CD1 | HD13 | 99.2° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | CD | H | 125.2° | 113.1° |
N | CA | C | CB | 118.3° | 113.5° |
N | CA | C | HA | 120.9° | 123.2° |
N | CA | CB | HA | 121.0° | 118.4° |
N | CA | C | O | 17.4° | 28.5° |
N | CA | C | OXT | 167.3° | 151.5° |
N | CA | CB | CG | 14.5° | 37.2° |
N | CA | CB | HB2 | 139.8° | 81.2° |
N | CA | CB | HB3 | 110.8° | 155.5° |
CA | N | CD | CG | 13.6° | 24.8° |
CA | N | CD | CD1 | 108.0° | 144.4° |
CA | N | CD | HD | 135.8° | 94.7° |
CD | N | CA | C | 104.1° | 156.9° |
CD | N | CA | CB | 18.3° | 38.4° |
CD | N | CA | HA | 139.3° | 80.0° |
N | CD | CG | CB | 3.6° | 0.8° |
N | CD | CG | CD1 | 120.8° | 119.6° |
N | CD | CG | HD | 122.9° | 119.5° |
N | CD | CG | OG | 176.9° | 179.1° |
N | CD | CD1 | HD | 123.2° | 121.0° |
N | CD | CD1 | HD11 | 180.0° | 179.7° |
N | CD | CD1 | HD12 | 54.7° | 60.2° |
N | CD | CD1 | HD13 | 54.7° | 59.8° |
H | N | CA | C | 21.2° | 90.1° |
H | N | CA | CB | 143.6° | 151.4° |
H | N | CA | HA | 95.4° | 33.0° |
H | N | CD | CG | 138.8° | 137.9° |
H | N | CD | CD1 | 17.2° | 102.5° |
H | N | CD | HD | 99.0° | 18.5° |
C | CA | CB | HA | 116.5° | 123.2° |
CA | C | O | OXT | 175.1° | 180.0° |
CA | C | OXT | HXT | 180.0° | 179.9° |
C | CA | CB | CG | 108.0° | 155.6° |
C | CA | CB | HB2 | 17.3° | 37.2° |
C | CA | CB | HB3 | 126.7° | 86.1° |
CB | CA | C | O | 100.9° | 85.0° |
CB | CA | C | OXT | 74.4° | 95.1° |
CA | CB | CG | HB2 | 125.3° | 118.5° |
CA | CB | CG | HB3 | 125.3° | 118.4° |
CA | CB | HB2 | HB3 | 119.5° | 123.2° |
CA | CB | CG | CD | 6.9° | 22.2° |
CA | CB | CG | OG | 172.6° | 157.9° |
HA | CA | C | O | 138.2° | 151.8° |
HA | CA | C | OXT | 46.5° | 28.2° |
HA | CA | CB | CG | 135.5° | 81.2° |
HA | CA | CB | HB2 | 99.2° | 160.4° |
HA | CA | CB | HB3 | 10.2° | 37.1° |
O | C | OXT | HXT | 4.7° | 0.0° |
CG | CB | HB2 | HB3 | 119.5° | 123.0° |
CB | CG | CD | OG | 179.5° | 179.9° |
CB | CG | CD | CD1 | 117.1° | 120.3° |
CB | CG | CD | HD | 126.6° | 118.7° |
HB2 | CB | CG | CD | 132.1° | 96.2° |
HB2 | CB | CG | OG | 47.4° | 83.7° |
HB3 | CB | CG | CD | 118.4° | 140.6° |
HB3 | CB | CG | OG | 62.1° | 39.5° |
CG | CD | CD1 | HD | 122.4° | 120.9° |
CG | CD | CD1 | HD11 | 65.6° | 61.6° |
CG | CD | CD1 | HD12 | 169.1° | 178.3° |
CG | CD | CD1 | HD13 | 59.6° | 58.3° |
OG | CG | CD | CD1 | 62.4° | 59.6° |
OG | CG | CD | HD | 53.9° | 61.4° |
CD | CD1 | HD11 | HD12 | 125.2° | 120.1° |
CD | CD1 | HD11 | HD13 | 125.2° | 119.9° |
CD | CD1 | HD12 | HD13 | 117.0° | 120.0° |
HD | CD | CD1 | HD11 | 56.8° | 59.4° |
HD | CD | CD1 | HD12 | 68.5° | 60.7° |
HD | CD | CD1 | HD13 | 177.9° | 179.3° |
HD11 | CD1 | HD12 | HD13 | 117.1° | 119.9° |