Obsolete: PO0
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.47Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | HN2 | sing | 1.01Å | 1.00Å | |
CA | C | sing | 1.53Å | 1.53Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | CM | sing | 1.53Å | 1.52Å | |
C | HC1 | sing | 1.09Å | 1.10Å | |
C | HC2 | sing | 1.09Å | 1.10Å | |
CB | CG | sing | 1.51Å | 1.51Å | |
CB | HB1 | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CG | CD1 | doub | 1.38Å | 1.39Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.40Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.40Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | CE2 | doub | 1.38Å | 1.40Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | CZ | doub | 1.38Å | 1.39Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | CZ | sing | 1.38Å | 1.39Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CZ | HZ | sing | 1.08Å | 1.08Å | |
CM | HM1 | sing | 1.09Å | 1.10Å | |
CM | HM2 | sing | 1.09Å | 1.10Å | |
CM | HM3 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.4° | 106.7° |
CA | N | HN2 | 109.5° | 106.7° |
N | CA | C | 110.3° | 109.5° |
N | CA | CB | 110.6° | 109.4° |
N | CA | HA | 108.0° | 109.5° |
H | N | HN2 | 109.5° | 106.7° |
C | CA | CB | 109.0° | 109.5° |
C | CA | HA | 109.6° | 109.5° |
CA | C | CM | 114.3° | 109.5° |
CA | C | HC1 | 106.8° | 109.5° |
CA | C | HC2 | 107.9° | 109.4° |
CB | CA | HA | 109.3° | 109.4° |
CA | CB | CG | 114.1° | 109.5° |
CA | CB | HB1 | 106.9° | 109.4° |
CA | CB | HB2 | 107.9° | 109.4° |
CM | C | HC1 | 106.8° | 109.5° |
CM | C | HC2 | 107.9° | 109.5° |
C | CM | HM1 | 109.5° | 109.4° |
C | CM | HM2 | 109.5° | 109.5° |
C | CM | HM3 | 109.5° | 109.5° |
HC1 | C | HC2 | 113.3° | 109.4° |
CG | CB | HB1 | 106.9° | 109.5° |
CG | CB | HB2 | 108.0° | 109.5° |
CB | CG | CD1 | 120.4° | 120.0° |
CB | CG | CD2 | 120.9° | 120.0° |
HB1 | CB | HB2 | 113.1° | 109.5° |
CD1 | CG | CD2 | 118.7° | 120.0° |
CG | CD1 | CE1 | 120.8° | 120.0° |
CG | CD1 | HD1 | 119.6° | 120.0° |
CG | CD2 | CE2 | 120.9° | 120.0° |
CG | CD2 | HD2 | 119.5° | 120.0° |
CE1 | CD1 | HD1 | 119.6° | 120.0° |
CD1 | CE1 | CZ | 120.0° | 120.0° |
CD1 | CE1 | HE1 | 120.0° | 120.0° |
CE2 | CD2 | HD2 | 119.5° | 120.0° |
CD2 | CE2 | CZ | 119.7° | 120.0° |
CD2 | CE2 | HE2 | 120.1° | 120.0° |
CZ | CE1 | HE1 | 120.0° | 120.0° |
CE1 | CZ | CE2 | 119.8° | 120.0° |
CE1 | CZ | HZ | 120.1° | 120.0° |
CZ | CE2 | HE2 | 120.2° | 119.9° |
CE2 | CZ | HZ | 120.1° | 120.1° |
HM1 | CM | HM2 | 109.5° | 109.5° |
HM1 | CM | HM3 | 109.4° | 109.5° |
HM2 | CM | HM3 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | HN2 | 120.0° | 113.8° |
N | CA | C | CB | 121.6° | 120.0° |
N | CA | C | HA | 118.8° | 120.0° |
N | CA | CB | HA | 118.7° | 120.0° |
N | CA | C | CM | 100.8° | 60.0° |
N | CA | C | HC1 | 17.1° | 60.0° |
N | CA | C | HC2 | 139.2° | 180.0° |
N | CA | CB | CG | 65.0° | 60.0° |
N | CA | CB | HB1 | 177.0° | 60.0° |
N | CA | CB | HB2 | 55.0° | 180.0° |
H | N | CA | C | 133.9° | 60.0° |
H | N | CA | CB | 105.4° | 60.0° |
H | N | CA | HA | 14.2° | 180.0° |
HN2 | N | CA | C | 106.1° | 173.8° |
HN2 | N | CA | CB | 14.6° | 53.8° |
HN2 | N | CA | HA | 134.2° | 66.1° |
C | CA | CB | HA | 119.8° | 120.0° |
CA | C | CM | HC1 | 117.9° | 120.0° |
CA | C | CM | HC2 | 120.0° | 120.0° |
CA | C | HC1 | HC2 | 118.6° | 120.0° |
C | CA | CB | CG | 173.5° | 180.0° |
C | CA | CB | HB1 | 55.5° | 60.0° |
C | CA | CB | HB2 | 66.5° | 60.0° |
CA | C | CM | HM1 | 173.3° | 180.0° |
CA | C | CM | HM2 | 53.2° | 60.0° |
CA | C | CM | HM3 | 66.8° | 60.0° |
CB | CA | C | CM | 137.6° | 180.0° |
CB | CA | C | HC1 | 104.5° | 60.0° |
CB | CA | C | HC2 | 17.6° | 60.0° |
CA | CB | CG | HB1 | 118.0° | 120.0° |
CA | CB | CG | HB2 | 120.0° | 120.0° |
CA | CB | HB1 | HB2 | 118.7° | 119.9° |
CA | CB | CG | CD1 | 152.0° | 90.0° |
CA | CB | CG | CD2 | 29.3° | 90.3° |
HA | CA | C | CM | 18.0° | 60.0° |
HA | CA | C | HC1 | 135.9° | 179.9° |
HA | CA | C | HC2 | 102.0° | 60.0° |
HA | CA | CB | CG | 53.7° | 60.0° |
HA | CA | CB | HB1 | 64.3° | 180.0° |
HA | CA | CB | HB2 | 173.7° | 60.1° |
CM | C | HC1 | HC2 | 118.7° | 120.0° |
C | CM | HM1 | HM2 | 120.0° | 120.0° |
C | CM | HM1 | HM3 | 120.0° | 120.0° |
C | CM | HM2 | HM3 | 120.0° | 120.0° |
HC1 | C | CM | HM1 | 68.8° | 59.9° |
HC1 | C | CM | HM2 | 171.1° | 60.0° |
HC1 | C | CM | HM3 | 51.1° | 180.0° |
HC2 | C | CM | HM1 | 53.3° | 60.0° |
HC2 | C | CM | HM2 | 66.7° | 180.0° |
HC2 | C | CM | HM3 | 173.2° | 60.0° |
CG | CB | HB1 | HB2 | 118.7° | 120.1° |
CB | CG | CD1 | CD2 | 178.8° | 179.7° |
CB | CG | CD1 | CE1 | 178.7° | 180.0° |
CB | CG | CD1 | HD1 | 1.3° | 0.1° |
CB | CG | CD2 | CE2 | 178.7° | 179.9° |
CB | CG | CD2 | HD2 | 1.3° | 0.3° |
HB1 | CB | CG | CD1 | 90.1° | 29.9° |
HB1 | CB | CG | CD2 | 88.7° | 149.7° |
HB2 | CB | CG | CD1 | 32.0° | 150.0° |
HB2 | CB | CG | CD2 | 149.3° | 29.6° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.0° | 0.5° |
CD1 | CG | CD2 | HD2 | 180.0° | 179.9° |
CG | CD1 | CE1 | CZ | 0.0° | 0.1° |
CG | CD1 | CE1 | HE1 | 180.0° | 179.9° |
CD2 | CG | CD1 | CE1 | 0.0° | 0.3° |
CD2 | CG | CD1 | HD1 | 180.0° | 179.7° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.6° |
CG | CD2 | CE2 | CZ | 0.0° | 0.4° |
CG | CD2 | CE2 | HE2 | 180.0° | 179.7° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.0° | 0.1° |
CD1 | CE1 | CZ | HZ | 180.0° | 179.9° |
HD1 | CD1 | CE1 | CZ | 180.0° | 179.9° |
HD1 | CD1 | CE1 | HE1 | 0.0° | 0.0° |
CD2 | CE2 | CZ | CE1 | 0.0° | 0.2° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.9° |
CD2 | CE2 | CZ | HZ | 180.0° | 179.9° |
HD2 | CD2 | CE2 | CZ | 180.0° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 0.0° | 0.1° |
CE1 | CZ | CE2 | HZ | 180.0° | 179.8° |
CE1 | CZ | CE2 | HE2 | 180.0° | 179.9° |
HE1 | CE1 | CZ | CE2 | 180.0° | 180.0° |
HE1 | CE1 | CZ | HZ | 0.0° | 0.1° |
HE2 | CE2 | CZ | HZ | 0.0° | 0.0° |
HM1 | CM | HM2 | HM3 | 119.9° | 120.1° |