PN1
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C8 | C7 | doub | 1.38Å | 1.42Å | Aromatic |
C8 | C9 | sing | 1.38Å | 1.46Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.06Å | |
C5 | C4 | sing | 1.51Å | 1.53Å | |
C5 | C7 | sing | 1.38Å | 1.54Å | Aromatic |
C5 | C11 | doub | 1.38Å | 1.52Å | Aromatic |
C6 | C1 | sing | 1.53Å | 1.53Å | |
C6 | C12 | sing | 1.55Å | 1.51Å | |
C6 | C16 | sing | 1.53Å | 1.52Å | |
C6 | S1 | sing | 1.85Å | 1.70Å | |
N1 | C3 | sing | 1.35Å | 1.37Å | |
N1 | C14 | sing | 1.46Å | 1.43Å | |
N1 | H1 | sing | 0.97Å | 1.00Å | |
C2 | C12 | sing | 1.51Å | 1.50Å | |
C2 | O1 | doub | 1.21Å | 1.23Å | |
C2 | O2 | sing | 1.34Å | 1.32Å | |
N3 | C12 | sing | 1.47Å | 1.44Å | |
N3 | C13 | sing | 1.48Å | 1.49Å | |
N3 | C15 | sing | 1.40Å | 1.41Å | |
C4 | C3 | sing | 1.51Å | 1.53Å | |
C4 | N2 | sing | 1.47Å | 1.53Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
C1 | H1C1 | sing | 1.09Å | 1.10Å | |
C1 | H1C2 | sing | 1.09Å | 1.10Å | |
C1 | H1C3 | sing | 1.09Å | 1.10Å | |
C3 | O3 | doub | 1.21Å | 1.24Å | |
C7 | H7 | sing | 1.08Å | 1.06Å | |
C9 | C10 | doub | 1.38Å | 1.55Å | Aromatic |
C9 | H9 | sing | 1.08Å | 1.06Å | |
C10 | C11 | sing | 1.38Å | 1.40Å | Aromatic |
C10 | H10 | sing | 1.08Å | 1.06Å | |
C11 | H11 | sing | 1.08Å | 1.06Å | |
C12 | H12 | sing | 1.09Å | 1.10Å | |
C13 | C14 | sing | 1.53Å | 1.54Å | |
C13 | S1 | sing | 1.84Å | 1.82Å | |
C13 | H13 | sing | 1.09Å | 1.10Å | |
C14 | C15 | sing | 1.51Å | 1.49Å | |
C14 | H14 | sing | 1.09Å | 1.10Å | |
C15 | O4 | doub | 1.21Å | 1.25Å | |
C16 | H161 | sing | 1.09Å | 1.10Å | |
C16 | H162 | sing | 1.09Å | 1.10Å | |
C16 | H163 | sing | 1.09Å | 1.10Å | |
N2 | H2N1 | sing | 1.01Å | 1.03Å | |
N2 | H2N2 | sing | 1.01Å | 1.03Å | |
O2 | H2 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C7 | C8 | C9 | 119.6° | 120.0° |
C7 | C8 | H8 | 120.2° | 120.0° |
C8 | C7 | C5 | 115.9° | 120.0° |
C8 | C7 | H7 | 122.0° | 120.0° |
C9 | C8 | H8 | 120.2° | 120.0° |
C8 | C9 | C10 | 126.2° | 120.0° |
C8 | C9 | H9 | 116.9° | 119.9° |
C4 | C5 | C7 | 121.5° | 120.0° |
C4 | C5 | C11 | 115.8° | 120.0° |
C5 | C4 | C3 | 118.5° | 109.5° |
C5 | C4 | N2 | 103.0° | 109.5° |
C5 | C4 | H4 | 104.8° | 109.5° |
C7 | C5 | C11 | 122.4° | 120.0° |
C5 | C7 | H7 | 122.0° | 120.0° |
C5 | C11 | C10 | 121.2° | 120.0° |
C5 | C11 | H11 | 119.4° | 120.0° |
C1 | C6 | C12 | 107.9° | 111.6° |
C1 | C6 | C16 | 113.3° | 111.3° |
C1 | C6 | S1 | 111.5° | 111.6° |
C6 | C1 | H1C1 | 109.5° | 109.5° |
C6 | C1 | H1C2 | 109.4° | 109.5° |
C6 | C1 | H1C3 | 109.5° | 109.4° |
C12 | C6 | C16 | 111.7° | 111.6° |
C12 | C6 | S1 | 107.8° | 98.7° |
C6 | C12 | C2 | 110.4° | 110.1° |
C6 | C12 | N3 | 106.8° | 111.7° |
C6 | C12 | H12 | 109.4° | 108.0° |
C16 | C6 | S1 | 104.5° | 111.5° |
C6 | C16 | H161 | 109.5° | 109.5° |
C6 | C16 | H162 | 109.5° | 109.5° |
C6 | C16 | H163 | 109.5° | 109.4° |
C6 | S1 | C13 | 85.7° | 97.1° |
C3 | N1 | C14 | 118.0° | 119.9° |
C3 | N1 | H1 | 121.0° | 120.1° |
N1 | C3 | C4 | 113.3° | 120.0° |
N1 | C3 | O3 | 126.9° | 120.0° |
C14 | N1 | H1 | 121.0° | 120.0° |
N1 | C14 | C13 | 121.6° | 113.7° |
N1 | C14 | C15 | 120.7° | 113.8° |
N1 | C14 | H14 | 88.2° | 113.0° |
C12 | C2 | O1 | 121.1° | 120.0° |
C12 | C2 | O2 | 119.6° | 120.0° |
C2 | C12 | N3 | 105.5° | 109.0° |
C2 | C12 | H12 | 110.7° | 109.0° |
O1 | C2 | O2 | 119.3° | 120.0° |
C2 | O2 | H2 | 119.5° | 120.0° |
C12 | N3 | C13 | 108.8° | 115.8° |
C12 | N3 | C15 | 120.2° | 116.1° |
N3 | C12 | H12 | 114.0° | 108.9° |
C13 | N3 | C15 | 89.8° | 92.5° |
N3 | C13 | C14 | 87.9° | 88.2° |
N3 | C13 | S1 | 109.1° | 103.3° |
N3 | C13 | H13 | 128.5° | 116.7° |
N3 | C15 | C14 | 93.1° | 92.1° |
N3 | C15 | O4 | 134.0° | 133.9° |
C3 | C4 | N2 | 97.0° | 109.5° |
C3 | C4 | H4 | 110.2° | 109.4° |
C4 | C3 | O3 | 119.7° | 120.0° |
N2 | C4 | H4 | 124.2° | 109.4° |
C4 | N2 | H2N1 | 109.5° | 106.7° |
C4 | N2 | H2N2 | 109.5° | 106.7° |
H1C1 | C1 | H1C2 | 109.5° | 109.5° |
H1C1 | C1 | H1C3 | 109.4° | 109.5° |
H1C2 | C1 | H1C3 | 109.5° | 109.5° |
C10 | C9 | H9 | 116.9° | 120.1° |
C9 | C10 | C11 | 113.9° | 120.0° |
C9 | C10 | H10 | 123.1° | 120.0° |
C11 | C10 | H10 | 123.1° | 120.0° |
C10 | C11 | H11 | 119.4° | 120.0° |
C14 | C13 | S1 | 124.1° | 114.1° |
C14 | C13 | H13 | 114.7° | 116.0° |
C13 | C14 | C15 | 84.9° | 86.3° |
C13 | C14 | H14 | 122.4° | 113.7° |
S1 | C13 | H13 | 95.6° | 115.0° |
C15 | C14 | H14 | 123.3° | 113.7° |
C14 | C15 | O4 | 132.9° | 134.0° |
H161 | C16 | H162 | 109.5° | 109.5° |
H161 | C16 | H163 | 109.5° | 109.4° |
H162 | C16 | H163 | 109.5° | 109.5° |
H2N1 | N2 | H2N2 | 109.5° | 106.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C7 | C8 | C9 | H8 | 180.0° | 179.9° |
C8 | C7 | C5 | C4 | 171.9° | 180.0° |
C8 | C7 | C5 | H7 | 180.0° | 180.0° |
C8 | C7 | C5 | C11 | 1.6° | 0.2° |
C7 | C8 | C9 | C10 | 1.0° | 0.1° |
C7 | C8 | C9 | H9 | 179.0° | 180.0° |
C9 | C8 | C7 | C5 | 1.8° | 0.1° |
C9 | C8 | C7 | H7 | 178.2° | 180.0° |
C8 | C9 | C10 | H9 | 180.0° | 179.9° |
C8 | C9 | C10 | C11 | 7.4° | 0.2° |
C8 | C9 | C10 | H10 | 172.6° | 180.0° |
H8 | C8 | C7 | C5 | 178.2° | 180.0° |
H8 | C8 | C7 | H7 | 1.8° | 0.1° |
H8 | C8 | C9 | C10 | 179.0° | 180.0° |
H8 | C8 | C9 | H9 | 1.0° | 0.1° |
C4 | C5 | C7 | C11 | 173.5° | 179.8° |
C5 | C4 | C3 | N1 | 177.0° | 90.0° |
C5 | C4 | C3 | N2 | 109.0° | 120.0° |
C5 | C4 | C3 | H4 | 120.6° | 120.0° |
C5 | C4 | N2 | H4 | 118.3° | 120.0° |
C5 | C4 | C3 | O3 | 0.8° | 90.0° |
C4 | C5 | C7 | H7 | 8.2° | 0.0° |
C4 | C5 | C11 | C10 | 165.3° | 179.7° |
C4 | C5 | C11 | H11 | 14.7° | 0.2° |
C5 | C4 | N2 | H2N1 | 19.3° | 59.9° |
C5 | C4 | N2 | H2N2 | 100.8° | 53.7° |
C7 | C5 | C4 | C3 | 104.1° | 120.0° |
C7 | C5 | C4 | N2 | 150.3° | 120.0° |
C7 | C5 | C4 | H4 | 19.2° | 0.1° |
C7 | C5 | C11 | C10 | 8.5° | 0.5° |
C7 | C5 | C11 | H11 | 171.5° | 180.0° |
C11 | C5 | C4 | C3 | 82.0° | 60.3° |
C11 | C5 | C4 | N2 | 23.5° | 59.7° |
C11 | C5 | C4 | H4 | 154.7° | 179.7° |
C11 | C5 | C7 | H7 | 178.4° | 179.7° |
C5 | C11 | C10 | C9 | 10.5° | 0.5° |
C5 | C11 | C10 | H11 | 180.0° | 179.5° |
C5 | C11 | C10 | H10 | 169.5° | 179.7° |
C1 | C6 | C12 | C16 | 125.2° | 125.2° |
C1 | C6 | C12 | S1 | 120.6° | 117.4° |
C1 | C6 | C16 | S1 | 121.5° | 125.3° |
C1 | C6 | C12 | C2 | 38.2° | 40.5° |
C1 | C6 | C12 | N3 | 76.0° | 80.8° |
C6 | C1 | H1C1 | H1C2 | 120.0° | 120.0° |
C6 | C1 | H1C1 | H1C3 | 120.0° | 119.9° |
C6 | C1 | H1C2 | H1C3 | 120.0° | 119.9° |
C1 | C6 | C12 | H12 | 160.2° | 159.4° |
C1 | C6 | S1 | C13 | 75.1° | 85.9° |
C1 | C6 | C16 | H161 | 66.5° | 59.2° |
C1 | C6 | C16 | H162 | 173.5° | 179.3° |
C1 | C6 | C16 | H163 | 53.5° | 60.7° |
C12 | C6 | C16 | S1 | 116.3° | 109.3° |
C6 | C12 | C2 | N3 | 115.0° | 122.9° |
C6 | C12 | C2 | H12 | 121.2° | 118.3° |
C6 | C12 | C2 | O1 | 106.5° | 94.2° |
C6 | C12 | C2 | O2 | 73.0° | 85.7° |
C6 | C12 | N3 | H12 | 120.9° | 119.3° |
C6 | C12 | N3 | C13 | 18.3° | 26.6° |
C6 | C12 | N3 | C15 | 119.5° | 133.5° |
C12 | C6 | C1 | H1C1 | 45.7° | 175.3° |
C12 | C6 | C1 | H1C2 | 165.7° | 64.6° |
C12 | C6 | C1 | H1C3 | 74.2° | 55.3° |
C12 | C6 | S1 | C13 | 43.2° | 31.5° |
C12 | C6 | C16 | H161 | 171.4° | 175.4° |
C12 | C6 | C16 | H162 | 51.4° | 55.3° |
C12 | C6 | C16 | H163 | 68.6° | 64.7° |
C16 | C6 | C12 | C2 | 87.0° | 84.8° |
C16 | C6 | C12 | N3 | 158.8° | 153.9° |
C16 | C6 | C1 | H1C1 | 170.0° | 59.3° |
C16 | C6 | C1 | H1C2 | 70.1° | 60.8° |
C16 | C6 | C1 | H1C3 | 50.0° | 179.3° |
C16 | C6 | C12 | H12 | 35.0° | 34.1° |
C16 | C6 | S1 | C13 | 162.1° | 148.9° |
C6 | C16 | H161 | H162 | 120.0° | 120.1° |
C6 | C16 | H161 | H163 | 120.0° | 119.9° |
C6 | C16 | H162 | H163 | 120.0° | 119.9° |
S1 | C6 | C12 | C2 | 158.7° | 157.9° |
S1 | C6 | C12 | N3 | 44.5° | 36.6° |
C6 | S1 | C13 | N3 | 32.5° | 19.3° |
S1 | C6 | C1 | H1C1 | 72.5° | 66.0° |
S1 | C6 | C1 | H1C2 | 47.5° | 173.9° |
S1 | C6 | C1 | H1C3 | 167.5° | 54.0° |
S1 | C6 | C12 | H12 | 79.3° | 83.2° |
C6 | S1 | C13 | C14 | 133.3° | 113.4° |
C6 | S1 | C13 | H13 | 101.7° | 109.0° |
S1 | C6 | C16 | H161 | 55.1° | 66.1° |
S1 | C6 | C16 | H162 | 64.9° | 54.0° |
S1 | C6 | C16 | H163 | 175.1° | 174.0° |
C3 | N1 | C14 | H1 | 180.0° | 180.0° |
N1 | C3 | C4 | O3 | 177.8° | 180.0° |
N1 | C3 | C4 | N2 | 68.1° | 150.0° |
N1 | C3 | C4 | H4 | 62.3° | 30.1° |
C3 | N1 | C14 | C13 | 157.4° | 150.0° |
C3 | N1 | C14 | C15 | 53.3° | 113.3° |
C3 | N1 | C14 | H14 | 75.0° | 18.4° |
N1 | C14 | C13 | N3 | 138.1° | 107.7° |
N1 | C14 | C15 | N3 | 139.7° | 107.2° |
C14 | N1 | C3 | C4 | 172.0° | 180.0° |
C14 | N1 | C3 | O3 | 10.4° | 0.0° |
N1 | C14 | C13 | C15 | 123.2° | 114.4° |
N1 | C14 | C13 | H14 | 110.2° | 131.3° |
N1 | C14 | C13 | S1 | 26.3° | 3.9° |
N1 | C14 | C13 | H13 | 89.9° | 133.3° |
N1 | C14 | C15 | H14 | 110.2° | 131.3° |
N1 | C14 | C15 | O4 | 40.5° | 73.5° |
H1 | N1 | C3 | C4 | 8.0° | 0.0° |
H1 | N1 | C3 | O3 | 169.6° | 180.0° |
H1 | N1 | C14 | C13 | 22.6° | 29.9° |
H1 | N1 | C14 | C15 | 126.7° | 66.7° |
H1 | N1 | C14 | H14 | 105.0° | 161.6° |
C12 | C2 | O1 | O2 | 179.5° | 179.9° |
C2 | C12 | N3 | H12 | 121.6° | 118.9° |
C2 | C12 | N3 | C13 | 135.7° | 148.4° |
C2 | C12 | N3 | C15 | 123.1° | 104.6° |
C12 | C2 | O2 | H2 | 180.0° | 180.0° |
O1 | C2 | C12 | N3 | 8.6° | 28.6° |
O1 | C2 | C12 | H12 | 132.3° | 147.4° |
O1 | C2 | O2 | H2 | 0.5° | 0.0° |
O2 | C2 | C12 | N3 | 171.9° | 151.4° |
O2 | C2 | C12 | H12 | 48.2° | 32.6° |
C12 | N3 | C13 | C15 | 122.0° | 120.7° |
C12 | N3 | C13 | C14 | 137.7° | 113.5° |
C12 | N3 | C13 | S1 | 12.2° | 0.9° |
C12 | N3 | C13 | H13 | 101.9° | 128.2° |
C12 | N3 | C15 | C14 | 128.1° | 113.1° |
C12 | N3 | C15 | O4 | 52.2° | 67.6° |
C13 | N3 | C12 | H12 | 102.6° | 92.7° |
N3 | C13 | C14 | S1 | 111.8° | 103.8° |
N3 | C13 | C14 | H13 | 132.0° | 119.0° |
N3 | C13 | S1 | H13 | 134.2° | 128.3° |
C13 | N3 | C15 | C14 | 16.3° | 7.3° |
N3 | C13 | C14 | H14 | 111.7° | 121.0° |
C13 | N3 | C15 | O4 | 163.9° | 172.0° |
C15 | N3 | C12 | H12 | 1.5° | 14.3° |
C15 | N3 | C13 | S1 | 109.9° | 121.7° |
C15 | N3 | C13 | H13 | 136.1° | 111.1° |
N3 | C15 | C14 | O4 | 179.8° | 179.3° |
N3 | C15 | C14 | H14 | 110.1° | 121.5° |
C3 | C4 | N2 | H4 | 120.2° | 119.9° |
C3 | C4 | N2 | H2N1 | 102.2° | 60.1° |
C3 | C4 | N2 | H2N2 | 137.8° | 173.8° |
N2 | C4 | C3 | O3 | 109.7° | 30.0° |
C4 | N2 | H2N1 | H2N2 | 120.0° | 113.7° |
H4 | C4 | C3 | O3 | 119.9° | 150.0° |
H4 | C4 | N2 | H2N1 | 137.6° | 180.0° |
H4 | C4 | N2 | H2N2 | 17.5° | 66.3° |
H1C1 | C1 | H1C2 | H1C3 | 120.0° | 120.0° |
C9 | C10 | C11 | H10 | 180.0° | 179.8° |
C9 | C10 | C11 | H11 | 169.5° | 180.0° |
H9 | C9 | C10 | C11 | 172.7° | 179.8° |
H9 | C9 | C10 | H10 | 7.4° | 0.0° |
H10 | C10 | C11 | H11 | 10.5° | 0.2° |
C14 | C13 | S1 | H13 | 125.0° | 137.6° |
C13 | C14 | C15 | H14 | 125.8° | 114.3° |
C13 | C14 | C15 | O4 | 164.5° | 172.2° |
S1 | C13 | C14 | C15 | 96.9° | 110.5° |
S1 | C13 | C14 | H14 | 136.5° | 135.2° |
H13 | C13 | C14 | C15 | 146.9° | 112.3° |
H13 | C13 | C14 | H14 | 20.3° | 2.0° |
H14 | C14 | C15 | O4 | 69.7° | 57.8° |
H161 | C16 | H162 | H163 | 120.0° | 119.9° |