PLW
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.23Å | |
C | C1 | sing | 1.51Å | 1.51Å | |
C | OXT | sing | 1.34Å | 1.35Å | |
C1 | C2 | sing | 1.53Å | 1.52Å | |
C1 | N3 | sing | 1.46Å | 1.48Å | |
N3 | C4 | sing | 1.35Å | 1.32Å | Aromatic |
N3 | N1 | sing | 1.29Å | 1.40Å | Aromatic |
C4 | C3 | doub | 1.35Å | 1.39Å | Aromatic |
C4 | CA | sing | 1.51Å | 1.48Å | |
C3 | N2 | sing | 1.34Å | 1.36Å | Aromatic |
N2 | N1 | doub | 1.29Å | 1.41Å | Aromatic |
CA | N | sing | 1.47Å | 1.46Å | |
CA | C6 | sing | 1.53Å | 1.53Å | |
C6 | C7 | sing | 1.53Å | 1.52Å | |
C6 | C8 | sing | 1.53Å | 1.52Å | |
C8 | C9 | sing | 1.53Å | 1.51Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
C2 | H21C | sing | 1.09Å | 1.10Å | |
C2 | H22C | sing | 1.09Å | 1.10Å | |
C2 | H23C | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.08Å | 1.08Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
C6 | H6 | sing | 1.09Å | 1.10Å | |
C7 | H71C | sing | 1.09Å | 1.10Å | |
C7 | H72C | sing | 1.09Å | 1.10Å | |
C7 | H73C | sing | 1.09Å | 1.10Å | |
C8 | H81C | sing | 1.09Å | 1.10Å | |
C8 | H82C | sing | 1.09Å | 1.10Å | |
C9 | H91C | sing | 1.09Å | 1.10Å | |
C9 | H92C | sing | 1.09Å | 1.10Å | |
C9 | H93C | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | C1 | 119.3° | 120.0° |
O | C | OXT | 121.0° | 120.0° |
C1 | C | OXT | 119.6° | 120.0° |
C | C1 | C2 | 110.9° | 109.4° |
C | C1 | N3 | 107.1° | 109.5° |
C | C1 | H1 | 109.5° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
C2 | C1 | N3 | 109.7° | 109.5° |
C2 | C1 | H1 | 109.4° | 109.5° |
C1 | C2 | H21C | 109.5° | 109.5° |
C1 | C2 | H22C | 109.5° | 109.5° |
C1 | C2 | H23C | 109.5° | 109.4° |
C1 | N3 | C4 | 132.9° | 125.9° |
C1 | N3 | N1 | 117.5° | 125.9° |
N3 | C1 | H1 | 110.0° | 109.5° |
C4 | N3 | N1 | 109.6° | 108.2° |
N3 | C4 | C3 | 109.8° | 106.2° |
N3 | C4 | CA | 132.2° | 126.9° |
N3 | N1 | N2 | 104.7° | 110.2° |
C3 | C4 | CA | 118.0° | 126.9° |
C4 | C3 | N2 | 106.5° | 106.5° |
C4 | C3 | H3 | 126.8° | 126.8° |
C4 | CA | N | 108.3° | 109.5° |
C4 | CA | C6 | 109.9° | 109.4° |
C4 | CA | HA | 108.6° | 109.5° |
C3 | N2 | N1 | 109.4° | 108.9° |
N2 | C3 | H3 | 126.8° | 126.7° |
N | CA | C6 | 113.1° | 109.4° |
N | CA | HA | 108.9° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
CA | C6 | C7 | 110.0° | 109.4° |
CA | C6 | C8 | 111.8° | 109.5° |
C6 | CA | HA | 108.0° | 109.5° |
CA | C6 | H6 | 108.4° | 109.5° |
C7 | C6 | C8 | 109.9° | 109.5° |
C7 | C6 | H6 | 108.4° | 109.5° |
C6 | C7 | H71C | 109.5° | 109.4° |
C6 | C7 | H72C | 109.5° | 109.5° |
C6 | C7 | H73C | 109.5° | 109.5° |
C6 | C8 | C9 | 110.0° | 109.5° |
C8 | C6 | H6 | 108.4° | 109.5° |
C6 | C8 | H81C | 109.4° | 109.5° |
C6 | C8 | H82C | 109.3° | 109.5° |
C9 | C8 | H81C | 109.3° | 109.4° |
C9 | C8 | H82C | 109.3° | 109.5° |
C8 | C9 | H91C | 109.5° | 109.4° |
C8 | C9 | H92C | 109.5° | 109.5° |
C8 | C9 | H93C | 109.5° | 109.5° |
H21C | C2 | H22C | 109.5° | 109.5° |
H21C | C2 | H23C | 109.5° | 109.5° |
H22C | C2 | H23C | 109.4° | 109.5° |
H | N | H2 | 109.5° | 111.0° |
H71C | C7 | H72C | 109.5° | 109.5° |
H71C | C7 | H73C | 109.4° | 109.5° |
H72C | C7 | H73C | 109.5° | 109.5° |
H81C | C8 | H82C | 109.5° | 109.5° |
H91C | C9 | H92C | 109.5° | 109.5° |
H91C | C9 | H93C | 109.5° | 109.5° |
H92C | C9 | H93C | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | C1 | OXT | 178.7° | 179.8° |
O | C | C1 | C2 | 88.0° | 120.0° |
O | C | C1 | N3 | 31.7° | 0.1° |
O | C | C1 | H1 | 151.1° | 119.9° |
O | C | OXT | HXT | 0.0° | 0.1° |
C | C1 | C2 | N3 | 118.2° | 120.0° |
C | C1 | C2 | H1 | 121.0° | 120.0° |
C | C1 | N3 | H1 | 119.0° | 120.0° |
C | C1 | N3 | C4 | 86.5° | 120.0° |
C | C1 | N3 | N1 | 91.9° | 59.7° |
C1 | C | OXT | HXT | 178.6° | 179.7° |
C | C1 | C2 | H21C | 180.0° | 60.0° |
C | C1 | C2 | H22C | 60.0° | 60.0° |
C | C1 | C2 | H23C | 60.0° | 180.0° |
OXT | C | C1 | C2 | 93.3° | 59.8° |
OXT | C | C1 | N3 | 146.9° | 179.8° |
OXT | C | C1 | H1 | 27.6° | 60.2° |
C2 | C1 | N3 | H1 | 120.5° | 120.0° |
C2 | C1 | N3 | C4 | 153.0° | 120.0° |
C2 | C1 | N3 | N1 | 28.6° | 60.3° |
C1 | C2 | H21C | H22C | 120.0° | 120.0° |
C1 | C2 | H21C | H23C | 120.0° | 120.0° |
C1 | C2 | H22C | H23C | 120.0° | 119.9° |
C1 | N3 | C4 | N1 | 178.5° | 179.7° |
C1 | N3 | C4 | C3 | 178.8° | 180.0° |
C1 | N3 | C4 | CA | 1.1° | 0.0° |
C1 | N3 | N1 | N2 | 179.0° | 179.8° |
N3 | C1 | C2 | H21C | 61.8° | 60.0° |
N3 | C1 | C2 | H22C | 58.2° | 180.0° |
N3 | C1 | C2 | H23C | 178.1° | 60.0° |
N3 | C4 | C3 | CA | 179.9° | 180.0° |
N3 | C4 | C3 | N2 | 0.3° | 0.0° |
C4 | N3 | N1 | N2 | 0.2° | 0.4° |
N3 | C4 | CA | N | 103.0° | 145.0° |
N3 | C4 | CA | C6 | 133.0° | 95.0° |
C4 | N3 | C1 | H1 | 32.6° | 0.0° |
N3 | C4 | C3 | H3 | 179.7° | 180.0° |
N3 | C4 | CA | HA | 15.1° | 25.0° |
N1 | N3 | C4 | C3 | 0.3° | 0.3° |
N1 | N3 | C4 | CA | 179.6° | 179.7° |
N3 | N1 | N2 | C3 | 0.0° | 0.5° |
N1 | N3 | C1 | H1 | 149.0° | 179.7° |
C4 | C3 | N2 | H3 | 180.0° | 179.9° |
C4 | C3 | N2 | N1 | 0.2° | 0.3° |
C3 | C4 | CA | N | 76.9° | 35.0° |
C3 | C4 | CA | C6 | 47.1° | 85.0° |
C3 | C4 | CA | HA | 165.0° | 155.0° |
CA | C4 | C3 | N2 | 179.6° | 180.0° |
C4 | CA | N | C6 | 122.1° | 120.0° |
C4 | CA | N | HA | 117.9° | 120.1° |
C4 | CA | C6 | HA | 118.3° | 120.0° |
C4 | CA | C6 | C7 | 57.2° | 60.0° |
C4 | CA | C6 | C8 | 179.5° | 180.0° |
CA | C4 | C3 | H3 | 0.3° | 0.0° |
C4 | CA | N | H | 180.0° | 64.0° |
C4 | CA | N | H2 | 60.0° | 59.9° |
C4 | CA | C6 | H6 | 61.1° | 60.0° |
N1 | N2 | C3 | H3 | 179.9° | 179.8° |
N | CA | C6 | HA | 120.5° | 120.0° |
N | CA | C6 | C7 | 178.4° | 180.0° |
N | CA | C6 | C8 | 59.3° | 60.0° |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | C6 | H6 | 60.1° | 60.0° |
CA | C6 | C7 | C8 | 123.5° | 120.0° |
CA | C6 | C7 | H6 | 118.3° | 120.0° |
CA | C6 | C8 | H6 | 119.3° | 120.0° |
CA | C6 | C8 | C9 | 42.9° | 175.0° |
C6 | CA | N | H | 57.9° | 176.1° |
C6 | CA | N | H2 | 177.9° | 60.0° |
CA | C6 | C7 | H71C | 180.0° | 180.0° |
CA | C6 | C7 | H72C | 60.0° | 60.0° |
CA | C6 | C7 | H73C | 60.0° | 60.0° |
CA | C6 | C8 | H81C | 77.2° | 65.0° |
CA | C6 | C8 | H82C | 163.0° | 55.0° |
C7 | C6 | C8 | H6 | 118.3° | 120.0° |
C7 | C6 | C8 | C9 | 79.5° | 65.0° |
C7 | C6 | CA | HA | 61.1° | 60.0° |
C6 | C7 | H71C | H72C | 120.0° | 120.0° |
C6 | C7 | H71C | H73C | 120.0° | 120.0° |
C6 | C7 | H72C | H73C | 120.0° | 120.0° |
C7 | C6 | C8 | H81C | 160.4° | 54.9° |
C7 | C6 | C8 | H82C | 40.6° | 175.0° |
C6 | C8 | C9 | H81C | 120.1° | 120.0° |
C6 | C8 | C9 | H82C | 120.1° | 120.0° |
C8 | C6 | CA | HA | 61.2° | 60.0° |
C8 | C6 | C7 | H71C | 56.5° | 60.0° |
C8 | C6 | C7 | H72C | 176.6° | 180.0° |
C8 | C6 | C7 | H73C | 63.4° | 60.0° |
C6 | C8 | H81C | H82C | 119.8° | 120.0° |
C6 | C8 | C9 | H91C | 180.0° | 60.0° |
C6 | C8 | C9 | H92C | 60.0° | 60.0° |
C6 | C8 | C9 | H93C | 60.0° | 180.0° |
C9 | C8 | C6 | H6 | 162.3° | 55.0° |
C9 | C8 | H81C | H82C | 119.8° | 120.0° |
C8 | C9 | H91C | H92C | 120.0° | 120.0° |
C8 | C9 | H91C | H93C | 120.0° | 120.0° |
C8 | C9 | H92C | H93C | 120.0° | 120.0° |
H1 | C1 | C2 | H21C | 59.0° | 180.0° |
H1 | C1 | C2 | H22C | 179.0° | 60.0° |
H1 | C1 | C2 | H23C | 61.0° | 60.0° |
H21C | C2 | H22C | H23C | 120.0° | 120.1° |
HA | CA | N | H | 62.1° | 56.1° |
HA | CA | N | H2 | 57.9° | 180.0° |
HA | CA | C6 | H6 | 179.4° | 180.0° |
H6 | C6 | C7 | H71C | 61.7° | 60.0° |
H6 | C6 | C7 | H72C | 58.3° | 60.0° |
H6 | C6 | C7 | H73C | 178.3° | 180.0° |
H6 | C6 | C8 | H81C | 42.2° | 175.0° |
H6 | C6 | C8 | H82C | 77.7° | 65.0° |
H71C | C7 | H72C | H73C | 119.9° | 120.0° |
H81C | C8 | C9 | H91C | 59.9° | 180.0° |
H81C | C8 | C9 | H92C | 179.9° | 60.0° |
H81C | C8 | C9 | H93C | 60.1° | 60.0° |
H82C | C8 | C9 | H91C | 59.9° | 60.0° |
H82C | C8 | C9 | H92C | 60.1° | NaN° |
H82C | C8 | C9 | H93C | 179.9° | 60.0° |
H91C | C9 | H92C | H93C | 120.0° | 120.0° |