PLF
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.23Å | |
C | CA1 | sing | 1.51Å | 1.51Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
CA1 | CB1 | sing | 1.53Å | 1.53Å | |
CA1 | N2 | sing | 1.46Å | 1.48Å | |
N2 | C2 | sing | 1.35Å | 1.37Å | Aromatic |
N2 | N3 | sing | 1.29Å | 1.40Å | Aromatic |
C2 | C1 | doub | 1.35Å | 1.39Å | Aromatic |
N3 | N1 | doub | 1.29Å | 1.29Å | Aromatic |
N1 | C1 | sing | 1.34Å | 1.35Å | Aromatic |
C1 | CA | sing | 1.51Å | 1.52Å | |
CA | CB | sing | 1.54Å | 1.52Å | |
CA | N | sing | 1.49Å | 1.47Å | |
CB | CG | sing | 1.54Å | 1.52Å | |
CG | CD | sing | 1.54Å | 1.53Å | |
CD | N | sing | 1.49Å | 1.46Å | |
CA1 | HA1 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
CB1 | HB11 | sing | 1.09Å | 1.10Å | |
CB1 | HB12 | sing | 1.09Å | 1.10Å | |
CB1 | HB13 | sing | 1.09Å | 1.10Å | |
C2 | H20 | sing | 1.08Å | 1.08Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB1C | sing | 1.09Å | 1.10Å | |
CB | HB2C | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
CG | HG1C | sing | 1.09Å | 1.10Å | |
CG | HG2C | sing | 1.09Å | 1.10Å | |
CD | HD1C | sing | 1.09Å | 1.10Å | |
CD | HD2C | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA1 | 120.9° | 120.0° |
O | C | OXT | 123.7° | 120.0° |
CA1 | C | OXT | 115.4° | 120.0° |
C | CA1 | CB1 | 109.0° | 109.5° |
C | CA1 | N2 | 110.9° | 109.5° |
C | CA1 | HA1 | 108.8° | 109.5° |
C | OXT | HXT | 109.5° | 116.9° |
CB1 | CA1 | N2 | 110.4° | 109.5° |
CB1 | CA1 | HA1 | 108.5° | 109.4° |
CA1 | CB1 | HB11 | 109.5° | 109.4° |
CA1 | CB1 | HB12 | 109.4° | 109.4° |
CA1 | CB1 | HB13 | 109.4° | 109.4° |
CA1 | N2 | C2 | 132.3° | 125.9° |
CA1 | N2 | N3 | 122.1° | 125.8° |
N2 | CA1 | HA1 | 109.2° | 109.5° |
C2 | N2 | N3 | 105.7° | 108.3° |
N2 | C2 | C1 | 107.1° | 106.2° |
N2 | C2 | H20 | 126.5° | 126.9° |
N2 | N3 | N1 | 110.0° | 110.1° |
C2 | C1 | N1 | 108.0° | 106.5° |
C2 | C1 | CA | 127.6° | 126.7° |
C1 | C2 | H20 | 126.5° | 126.9° |
N3 | N1 | C1 | 109.2° | 108.9° |
N1 | C1 | CA | 124.4° | 126.8° |
C1 | CA | CB | 110.1° | 110.4° |
C1 | CA | N | 112.3° | 110.4° |
C1 | CA | HA | 109.7° | 110.3° |
CB | CA | N | 104.7° | 104.6° |
CA | CB | CG | 104.8° | 105.0° |
CB | CA | HA | 109.6° | 110.4° |
CA | CB | HB1C | 110.6° | 110.4° |
CA | CB | HB2C | 110.6° | 110.3° |
CA | N | CD | 111.6° | 104.2° |
N | CA | HA | 110.3° | 110.6° |
CA | N | H | 108.9° | 111.0° |
CB | CG | CD | 107.0° | 105.1° |
CG | CB | HB1C | 110.6° | 110.3° |
CG | CB | HB2C | 110.6° | 110.3° |
CB | CG | HG1C | 110.1° | 110.3° |
CB | CG | HG2C | 110.1° | 110.4° |
CG | CD | N | 105.1° | 104.6° |
CD | CG | HG1C | 110.1° | 110.3° |
CD | CG | HG2C | 110.1° | 110.3° |
CG | CD | HD1C | 110.5° | 110.4° |
CG | CD | HD2C | 110.5° | 110.4° |
CD | N | H | 108.9° | 111.0° |
N | CD | HD1C | 110.6° | 110.4° |
N | CD | HD2C | 110.5° | 110.4° |
HB11 | CB1 | HB12 | 109.5° | 109.5° |
HB11 | CB1 | HB13 | 109.5° | 109.5° |
HB12 | CB1 | HB13 | 109.5° | 109.5° |
HB1C | CB | HB2C | 109.5° | 110.4° |
HG1C | CG | HG2C | 109.4° | 110.3° |
HD1C | CD | HD2C | 109.5° | 110.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA1 | OXT | 179.8° | 179.8° |
O | C | CA1 | CB1 | 82.9° | 120.0° |
O | C | CA1 | N2 | 38.9° | 0.0° |
O | C | CA1 | HA1 | 158.9° | 120.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
C | CA1 | CB1 | N2 | 122.1° | 120.0° |
C | CA1 | CB1 | HA1 | 118.3° | 120.0° |
C | CA1 | N2 | HA1 | 119.8° | 120.0° |
C | CA1 | N2 | C2 | 68.0° | 35.0° |
C | CA1 | N2 | N3 | 112.9° | 145.3° |
CA1 | C | OXT | HXT | 179.8° | 179.7° |
C | CA1 | CB1 | HB11 | 180.0° | 60.0° |
C | CA1 | CB1 | HB12 | 60.0° | 60.0° |
C | CA1 | CB1 | HB13 | 60.0° | 180.0° |
OXT | C | CA1 | CB1 | 96.8° | 59.8° |
OXT | C | CA1 | N2 | 141.4° | 179.8° |
OXT | C | CA1 | HA1 | 21.3° | 60.2° |
CB1 | CA1 | N2 | HA1 | 119.2° | 120.0° |
CB1 | CA1 | N2 | C2 | 171.0° | 84.9° |
CB1 | CA1 | N2 | N3 | 8.1° | 94.7° |
CA1 | CB1 | HB11 | HB12 | 120.0° | 119.9° |
CA1 | CB1 | HB11 | HB13 | 120.0° | 120.0° |
CA1 | CB1 | HB12 | HB13 | 119.9° | 120.0° |
CA1 | N2 | C2 | N3 | 179.2° | 179.7° |
CA1 | N2 | C2 | C1 | 179.4° | 180.0° |
CA1 | N2 | N3 | N1 | 179.6° | 180.0° |
N2 | CA1 | CB1 | HB11 | 57.9° | 60.0° |
N2 | CA1 | CB1 | HB12 | 62.1° | 180.0° |
N2 | CA1 | CB1 | HB13 | 177.9° | 60.0° |
CA1 | N2 | C2 | H20 | 0.6° | 0.1° |
N2 | C2 | C1 | H20 | 180.0° | 179.9° |
C2 | N2 | N3 | N1 | 0.3° | 0.3° |
N2 | C2 | C1 | N1 | 0.0° | 0.2° |
N2 | C2 | C1 | CA | 179.3° | 179.9° |
C2 | N2 | CA1 | HA1 | 51.8° | 155.1° |
N3 | N2 | C2 | C1 | 0.2° | 0.3° |
N2 | N3 | N1 | C1 | 0.3° | 0.2° |
N3 | N2 | CA1 | HA1 | 127.3° | 25.3° |
N3 | N2 | C2 | H20 | 179.8° | 179.8° |
C2 | C1 | N1 | N3 | 0.2° | 0.0° |
C2 | C1 | N1 | CA | 179.3° | 179.8° |
C2 | C1 | CA | CB | 103.0° | 125.0° |
C2 | C1 | CA | N | 13.3° | 9.8° |
C2 | C1 | CA | HA | 136.3° | 112.7° |
N3 | N1 | C1 | CA | 179.1° | 179.9° |
N1 | C1 | CA | CB | 77.9° | 54.8° |
N1 | C1 | CA | N | 165.8° | 170.0° |
N1 | C1 | C2 | H20 | 179.9° | 179.9° |
N1 | C1 | CA | HA | 42.8° | 67.5° |
C1 | CA | CB | N | 121.0° | 118.8° |
C1 | CA | CB | HA | 120.7° | 122.2° |
C1 | CA | N | HA | 122.7° | 122.4° |
C1 | CA | CB | CG | 94.9° | 142.7° |
C1 | CA | N | CD | 99.4° | 158.3° |
CA | C1 | C2 | H20 | 0.7° | 0.1° |
C1 | CA | CB | HB1C | 24.3° | 23.8° |
C1 | CA | CB | HB2C | 145.8° | 98.5° |
C1 | CA | N | H | 140.3° | 82.2° |
CB | CA | N | HA | 117.8° | 118.9° |
CA | CB | CG | HB1C | 119.3° | 118.9° |
CA | CB | CG | HB2C | 119.3° | 118.8° |
CA | CB | CG | CD | 23.2° | 0.0° |
CB | CA | N | CD | 20.1° | 39.5° |
CA | CB | HB1C | HB2C | 122.2° | 122.3° |
CB | CA | N | H | 100.2° | 159.1° |
CA | CB | CG | HG1C | 96.4° | 119.0° |
CA | CB | CG | HG2C | 142.8° | 118.9° |
N | CA | CB | CG | 26.0° | 23.9° |
CA | N | CD | CG | 5.6° | 39.5° |
CA | N | CD | H | 120.3° | 119.5° |
N | CA | CB | HB1C | 145.3° | 95.0° |
N | CA | CB | HB2C | 93.2° | 142.7° |
CA | N | CD | HD1C | 113.7° | 158.3° |
CA | N | CD | HD2C | 124.9° | 79.3° |
CB | CG | CD | HG1C | 119.6° | 118.9° |
CB | CG | CD | HG2C | 119.6° | 119.0° |
CB | CG | CD | N | 11.3° | 23.8° |
CG | CB | CA | HA | 144.3° | 95.1° |
CG | CB | HB1C | HB2C | 122.1° | 122.2° |
CB | CG | HG1C | HG2C | 121.2° | 122.2° |
CB | CG | CD | HD1C | 130.6° | 142.7° |
CB | CG | CD | HD2C | 108.0° | 94.9° |
CG | CD | N | HD1C | 119.3° | 118.8° |
CG | CD | N | HD2C | 119.3° | 118.8° |
CD | CG | CB | HB1C | 142.5° | 118.9° |
CD | CG | CB | HB2C | 96.1° | 118.9° |
CG | CD | N | H | 114.7° | 159.0° |
CD | CG | HG1C | HG2C | 121.1° | 122.1° |
CG | CD | HD1C | HD2C | 122.0° | 122.4° |
CD | N | CA | HA | 137.9° | 79.4° |
N | CD | CG | HG1C | 108.3° | 95.1° |
N | CD | CG | HG2C | 131.0° | 142.8° |
N | CD | HD1C | HD2C | 122.0° | 122.4° |
HA1 | CA1 | CB1 | HB11 | 61.7° | 180.0° |
HA1 | CA1 | CB1 | HB12 | 178.3° | 60.0° |
HA1 | CA1 | CB1 | HB13 | 58.3° | 60.0° |
HB11 | CB1 | HB12 | HB13 | 120.0° | 120.1° |
HA | CA | CB | HB1C | 96.4° | 146.0° |
HA | CA | CB | HB2C | 25.1° | 23.7° |
HA | CA | N | H | 17.6° | 40.2° |
HB1C | CB | CG | HG1C | 22.8° | 0.0° |
HB1C | CB | CG | HG2C | 97.9° | 122.2° |
HB2C | CB | CG | HG1C | 144.3° | 122.2° |
HB2C | CB | CG | HG2C | 23.5° | 0.1° |
H | N | CD | HD1C | 126.0° | 82.2° |
H | N | CD | HD2C | 4.6° | 40.2° |
HG1C | CG | CD | HD1C | 11.0° | 23.8° |
HG1C | CG | CD | HD2C | 132.4° | 146.1° |
HG2C | CG | CD | HD1C | 109.7° | 98.4° |
HG2C | CG | CD | HD2C | 11.7° | 24.0° |