PK3
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N6 | C11 | sing | 1.37Å | 1.35Å | Aromatic |
N6 | C7 | sing | 1.38Å | 1.35Å | Aromatic |
C11 | N5 | sing | 1.38Å | 1.36Å | |
C11 | N4 | doub | 1.31Å | 1.35Å | Aromatic |
N5 | C12 | sing | 1.46Å | 1.46Å | |
N4 | C6 | sing | 1.36Å | 1.35Å | Aromatic |
C6 | C7 | doub | 1.41Å | 1.39Å | Aromatic |
C6 | C5 | sing | 1.39Å | 1.39Å | Aromatic |
C7 | C8 | sing | 1.38Å | 1.41Å | Aromatic |
C8 | C9 | sing | 1.51Å | 1.55Å | |
C8 | C3 | doub | 1.39Å | 1.42Å | Aromatic |
C9 | C10 | sing | 1.53Å | 1.55Å | |
C3 | N2 | sing | 1.36Å | 1.37Å | |
C3 | C2 | sing | 1.42Å | 1.41Å | Aromatic |
N2 | C4 | doub | 1.31Å | 1.34Å | |
C4 | N3 | sing | 1.37Å | 1.28Å | |
C4 | N1 | sing | 1.37Å | 1.36Å | |
N1 | C1 | sing | 1.35Å | 1.34Å | |
C1 | O1 | doub | 1.22Å | 1.21Å | |
C1 | C2 | sing | 1.47Å | 1.51Å | |
C2 | C5 | doub | 1.39Å | 1.40Å | Aromatic |
C10 | O2 | sing | 1.43Å | 1.44Å | |
N6 | HN6 | sing | 0.97Å | 1.00Å | |
N5 | HN5 | sing | 0.97Å | 1.00Å | |
C12 | H12 | sing | 1.09Å | 1.10Å | |
C12 | H12A | sing | 1.09Å | 1.10Å | |
C12 | H12B | sing | 1.09Å | 1.10Å | |
C9 | H9 | sing | 1.09Å | 1.10Å | |
C9 | H9A | sing | 1.09Å | 1.10Å | |
N3 | HN3 | sing | 0.97Å | 1.00Å | |
N3 | HN3A | sing | 0.97Å | 1.00Å | |
N1 | HN1 | sing | 0.97Å | 1.00Å | |
C5 | H5 | sing | 1.08Å | 1.08Å | |
C10 | H10 | sing | 1.09Å | 1.10Å | |
C10 | H10A | sing | 1.09Å | 1.10Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C11 | N6 | C7 | 108.2° | 107.3° |
N6 | C11 | N5 | 124.3° | 125.0° |
N6 | C11 | N4 | 108.2° | 110.0° |
C11 | N6 | HN6 | 125.9° | 126.4° |
N6 | C7 | C6 | 107.3° | 106.0° |
N6 | C7 | C8 | 130.5° | 133.3° |
C7 | N6 | HN6 | 125.9° | 126.3° |
N5 | C11 | N4 | 127.3° | 125.0° |
C11 | N5 | C12 | 119.3° | 120.0° |
C11 | N5 | HN5 | 106.3° | 120.0° |
C11 | N4 | C6 | 108.7° | 109.5° |
C12 | N5 | HN5 | 106.3° | 120.0° |
N5 | C12 | H12 | 109.5° | 109.5° |
N5 | C12 | H12A | 109.4° | 109.5° |
N5 | C12 | H12B | 109.5° | 109.5° |
N4 | C6 | C7 | 107.2° | 107.1° |
N4 | C6 | C5 | 130.6° | 132.9° |
C7 | C6 | C5 | 121.6° | 120.0° |
C6 | C7 | C8 | 122.2° | 120.6° |
C6 | C5 | C2 | 116.5° | 119.5° |
C6 | C5 | H5 | 121.7° | 120.3° |
C7 | C8 | C9 | 122.3° | 120.1° |
C7 | C8 | C3 | 116.6° | 119.7° |
C9 | C8 | C3 | 121.1° | 120.1° |
C8 | C9 | C10 | 122.4° | 109.5° |
C8 | C9 | H9 | 105.4° | 109.5° |
C8 | C9 | H9A | 102.3° | 109.5° |
C8 | C3 | N2 | 123.0° | 121.3° |
C8 | C3 | C2 | 119.8° | 119.7° |
C9 | C10 | O2 | 108.3° | 109.4° |
C10 | C9 | H9 | 105.4° | 109.4° |
C10 | C9 | H9A | 102.3° | 109.5° |
C9 | C10 | H10 | 109.9° | 109.4° |
C9 | C10 | H10A | 110.2° | 109.5° |
N2 | C3 | C2 | 117.1° | 119.1° |
C3 | N2 | C4 | 125.6° | 121.6° |
C3 | C2 | C1 | 117.3° | 118.0° |
C3 | C2 | C5 | 122.9° | 120.4° |
N2 | C4 | N3 | 119.4° | 118.5° |
N2 | C4 | N1 | 119.2° | 123.1° |
N3 | C4 | N1 | 121.1° | 118.4° |
C4 | N3 | HN3 | 111.1° | 120.0° |
C4 | N3 | HN3A | 124.4° | 120.0° |
C4 | N1 | C1 | 121.9° | 120.6° |
C4 | N1 | HN1 | 119.0° | 119.7° |
N1 | C1 | O1 | 123.2° | 121.2° |
N1 | C1 | C2 | 118.4° | 117.6° |
C1 | N1 | HN1 | 119.1° | 119.7° |
O1 | C1 | C2 | 118.3° | 121.2° |
C1 | C2 | C5 | 119.5° | 121.5° |
C2 | C5 | H5 | 121.7° | 120.2° |
O2 | C10 | H10 | 109.9° | 109.5° |
O2 | C10 | H10A | 110.1° | 109.5° |
C10 | O2 | HO2 | 109.5° | 114.0° |
H12 | C12 | H12A | 109.5° | 109.5° |
H12 | C12 | H12B | 109.5° | 109.4° |
H12A | C12 | H12B | 109.5° | 109.4° |
H9 | C9 | H9A | 120.3° | 109.5° |
HN3 | N3 | HN3A | 124.5° | 120.0° |
H10 | C10 | H10A | 108.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C11 | N6 | C7 | HN6 | 180.0° | 179.8° |
N6 | C11 | N5 | N4 | 173.4° | 180.0° |
N6 | C11 | N5 | C12 | 5.0° | 0.0° |
N6 | C11 | N4 | C6 | 5.8° | 0.0° |
C11 | N6 | C7 | C6 | 2.2° | 0.0° |
C11 | N6 | C7 | C8 | 177.7° | 180.0° |
N6 | C11 | N5 | HN5 | 124.9° | 179.9° |
C7 | N6 | C11 | N5 | 179.4° | 180.0° |
C7 | N6 | C11 | N4 | 4.9° | 0.0° |
N6 | C7 | C6 | N4 | 1.3° | 0.0° |
N6 | C7 | C6 | C8 | 180.0° | 179.9° |
N6 | C7 | C6 | C5 | 173.7° | 180.0° |
N6 | C7 | C8 | C9 | 3.6° | 0.1° |
N6 | C7 | C8 | C3 | 176.9° | 179.9° |
C11 | N5 | C12 | HN5 | 120.0° | 179.9° |
N5 | C11 | N4 | C6 | 179.9° | 180.0° |
N5 | C11 | N6 | HN6 | 0.5° | 0.2° |
C11 | N5 | C12 | H12 | 13.9° | 180.0° |
C11 | N5 | C12 | H12A | 133.9° | 60.0° |
C11 | N5 | C12 | H12B | 106.1° | 60.0° |
N4 | C11 | N5 | C12 | 168.5° | 179.9° |
C11 | N4 | C6 | C7 | 4.4° | 0.0° |
C11 | N4 | C6 | C5 | 175.8° | 180.0° |
N4 | C11 | N6 | HN6 | 175.1° | 179.7° |
N4 | C11 | N5 | HN5 | 48.5° | 0.0° |
N5 | C12 | H12 | H12A | 120.0° | 120.0° |
N5 | C12 | H12 | H12B | 120.0° | 120.0° |
N5 | C12 | H12A | H12B | 120.0° | 120.0° |
N4 | C6 | C7 | C5 | 172.4° | 180.0° |
N4 | C6 | C7 | C8 | 178.7° | 180.0° |
N4 | C6 | C5 | C2 | 177.6° | 180.0° |
N4 | C6 | C5 | H5 | 2.4° | 0.0° |
C6 | C7 | C8 | C9 | 176.4° | 180.0° |
C6 | C7 | C8 | C3 | 3.2° | 0.0° |
C7 | C6 | C5 | C2 | 7.2° | 0.0° |
C6 | C7 | N6 | HN6 | 177.8° | 179.7° |
C7 | C6 | C5 | H5 | 172.8° | 180.0° |
C5 | C6 | C7 | C8 | 6.3° | 0.0° |
C6 | C5 | C2 | C3 | 5.5° | 0.0° |
C6 | C5 | C2 | C1 | 178.7° | 179.9° |
C6 | C5 | C2 | H5 | 180.0° | 180.0° |
C7 | C8 | C9 | C3 | 179.5° | 180.0° |
C7 | C8 | C9 | C10 | 80.1° | 90.0° |
C7 | C8 | C3 | N2 | 175.6° | 180.0° |
C7 | C8 | C3 | C2 | 1.4° | 0.0° |
C8 | C7 | N6 | HN6 | 2.3° | 0.2° |
C7 | C8 | C9 | H9 | 159.9° | 150.0° |
C7 | C8 | C9 | H9A | 33.3° | 30.0° |
C8 | C9 | C10 | H9 | 120.0° | 120.0° |
C8 | C9 | C10 | H9A | 113.4° | 120.0° |
C9 | C8 | C3 | N2 | 4.9° | 0.0° |
C9 | C8 | C3 | C2 | 178.2° | 180.0° |
C8 | C9 | C10 | O2 | 32.0° | 180.0° |
C8 | C9 | H9 | H9A | 114.7° | 120.0° |
C8 | C9 | C10 | H10 | 88.0° | 60.0° |
C8 | C9 | C10 | H10A | 152.5° | 59.9° |
C3 | C8 | C9 | C10 | 99.4° | 90.0° |
C8 | C3 | N2 | C2 | 177.0° | 180.0° |
C8 | C3 | N2 | C4 | 174.7° | 180.0° |
C8 | C3 | C2 | C1 | 176.1° | 180.0° |
C8 | C3 | C2 | C5 | 2.7° | 0.0° |
C3 | C8 | C9 | H9 | 20.6° | 30.0° |
C3 | C8 | C9 | H9A | 147.2° | 150.0° |
C9 | C10 | O2 | H10 | 120.0° | 119.9° |
C9 | C10 | O2 | H10A | 120.5° | 120.0° |
C10 | C9 | H9 | H9A | 114.6° | 120.0° |
C9 | C10 | H10 | H10A | 120.5° | 120.0° |
C9 | C10 | O2 | HO2 | 113.4° | 180.0° |
C3 | N2 | C4 | N3 | 179.7° | 180.0° |
C3 | N2 | C4 | N1 | 5.7° | 0.0° |
N2 | C3 | C2 | C1 | 1.0° | 0.0° |
N2 | C3 | C2 | C5 | 174.4° | 180.0° |
C2 | C3 | N2 | C4 | 2.3° | 0.0° |
C3 | C2 | C1 | N1 | 3.2° | 0.1° |
C3 | C2 | C1 | O1 | 179.9° | 180.0° |
C3 | C2 | C1 | C5 | 173.7° | 179.9° |
C3 | C2 | C5 | H5 | 174.6° | 180.0° |
N2 | C4 | N3 | N1 | 174.0° | 180.0° |
N2 | C4 | N1 | C1 | 7.9° | 0.0° |
N2 | C4 | N3 | HN3 | 180.0° | 0.0° |
N2 | C4 | N3 | HN3A | 0.0° | 180.0° |
N2 | C4 | N1 | HN1 | 172.1° | 180.0° |
N3 | C4 | N1 | C1 | 178.2° | 180.0° |
C4 | N3 | HN3 | HN3A | 180.0° | 180.0° |
N3 | C4 | N1 | HN1 | 1.8° | 0.0° |
C4 | N1 | C1 | HN1 | 180.0° | 180.0° |
C4 | N1 | C1 | O1 | 176.6° | 180.0° |
C4 | N1 | C1 | C2 | 6.6° | 0.0° |
N1 | C4 | N3 | HN3 | 6.0° | 180.0° |
N1 | C4 | N3 | HN3A | 173.9° | 0.0° |
N1 | C1 | O1 | C2 | 176.7° | 179.9° |
N1 | C1 | C2 | C5 | 176.8° | 180.0° |
O1 | C1 | C2 | C5 | 6.3° | 0.1° |
O1 | C1 | N1 | HN1 | 3.4° | 0.0° |
C2 | C1 | N1 | HN1 | 173.3° | 179.9° |
C1 | C2 | C5 | H5 | 1.3° | 0.1° |
O2 | C10 | C9 | H9 | 152.0° | 60.0° |
O2 | C10 | C9 | H9A | 81.4° | 60.0° |
O2 | C10 | H10 | H10A | 120.5° | 120.1° |
HN5 | N5 | C12 | H12 | 106.1° | 0.1° |
HN5 | N5 | C12 | H12A | 13.9° | 120.1° |
HN5 | N5 | C12 | H12B | 133.9° | 119.9° |
H12 | C12 | H12A | H12B | 120.0° | 120.0° |
H9 | C9 | C10 | H10 | 32.0° | 180.0° |
H9 | C9 | C10 | H10A | 87.5° | 60.1° |
H9A | C9 | C10 | H10 | 158.6° | 60.0° |
H9A | C9 | C10 | H10A | 39.1° | 179.9° |
H10 | C10 | O2 | HO2 | 126.7° | 60.1° |
H10A | C10 | O2 | HO2 | 7.2° | 60.0° |