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PJ3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.47Å1.29Å
CACBsing1.53Å1.54Å
COdoub1.21Å1.13Å
CBCGsing1.51Å1.52Å
CGND1sing1.34Å1.42ÅAromatic
CGCD2doub1.35Å1.39ÅAromatic
N2C2sing1.37Å1.39Å
C2N1sing1.36Å1.39Å
C2N3doub1.31Å1.37Å
N1C6sing1.35Å1.47Å
ND1CE1doub1.30Å1.40ÅAromatic
CD2NE2sing1.37Å1.41ÅAromatic
CE1NE2sing1.35Å1.37ÅAromatic
NE2PAsing1.64Å1.88Å
C1'C2'sing1.55Å1.56Å
C1'N9sing1.46Å1.54Å
C1'O4'sing1.44Å1.43Å
C2'C3'sing1.55Å1.57Å
C2'O2'sing1.43Å1.39Å
C3'C4'sing1.54Å1.55Å
C3'O3'sing1.43Å1.40Å
C4C5doub1.39Å1.43Å
C4N3sing1.34Å1.39Å
C4N9sing1.39Å1.42Å
C4'C5'sing1.53Å1.59Å
C4'O4'sing1.44Å1.44Å
C5C6sing1.40Å1.48Å
C5N7sing1.41Å1.46Å
C5'O5'sing1.43Å1.40Å
C6O6doub1.22Å1.21Å
C8N7sing1.47Å1.52Å
C8N9sing1.47Å1.48Å
CM7N7sing1.47Å1.50Å
O1APAdoub1.48Å1.48Å
O3APAsing1.61Å1.48Å
O5'PAsing1.61Å1.73Å
CACsing1.51Å1.86Å
NHsing1.01Å1.00Å
NH2sing1.01Å1.00Å
CAHAsing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
N2H8sing0.97Å1.00Å
N2H9sing0.97Å1.00Å
N1H10sing0.97Å1.00Å
CD2HD2sing1.08Å1.08Å
CE1HE1sing1.08Å1.08Å
C1'H13sing1.09Å1.10Å
C2'H14sing1.09Å1.10Å
C3'H15sing1.09Å1.10Å
C4'H16sing1.09Å1.10Å
C5'H17sing1.09Å1.10Å
C5'H18sing1.09Å1.10Å
C8H19sing1.09Å1.10Å
C8H20sing1.09Å1.10Å
CM7H21sing1.09Å1.10Å
CM7H22sing1.09Å1.10Å
CM7H23sing1.09Å1.10Å
O2'H24sing0.97Å0.95Å
O3'H25sing0.97Å0.95Å
O3AH26sing0.97Å0.95Å
COXTsing1.34Å274.65Å
OXTHXTsing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NCACB123.3°109.5°
NCAC94.5°109.4°
CANH109.5°111.0°
CANH2109.5°111.0°
NCAHA112.8°109.5°
CACBCG106.8°109.5°
CBCAC109.3°109.5°
CBCAHA109.0°109.5°
CACBHB2110.1°109.5°
CACBHB3110.2°109.5°
OCCA123.7°120.0°
OCOXT91.8°120.1°
CBCGND1128.8°126.0°
CBCGCD2126.4°126.0°
CGCBHB2110.1°109.5°
CGCBHB3110.1°109.5°
ND1CGCD2104.8°108.0°
CGND1CE1108.4°109.3°
CGCD2NE2111.0°106.9°
CGCD2HD2124.5°126.5°
N2C2N1117.5°119.2°
N2C2N3119.2°119.2°
C2N2H8120.0°120.0°
C2N2H9120.0°120.0°
N1C2N3123.4°121.5°
C2N1C6123.1°120.0°
C2N1H10118.4°120.0°
C2N3C4115.9°121.3°
N1C6C5113.3°118.8°
N1C6O6112.1°120.6°
C6N1H10118.4°119.9°
ND1CE1NE2109.8°108.7°
ND1CE1HE1125.1°125.7°
CD2NE2CE1105.9°107.2°
CD2NE2PA128.6°126.4°
NE2CD2HD2124.5°126.6°
CE1NE2PA125.4°126.4°
NE2CE1HE1125.1°125.6°
NE2PAO1A103.3°109.5°
NE2PAO3A104.3°109.4°
NE2PAO5'106.7°109.5°
C2'C1'N9112.9°110.7°
C2'C1'O4'104.6°103.5°
C1'C2'C3'105.8°102.1°
C1'C2'O2'107.8°110.9°
C2'C1'H13107.3°110.6°
C1'C2'H14110.2°110.8°
N9C1'O4'115.2°110.6°
C1'N9C4133.7°126.1°
C1'N9C8117.4°126.2°
N9C1'H13107.5°110.5°
C1'O4'C4'114.4°107.0°
O4'C1'H13109.0°110.8°
C3'C2'O2'110.1°110.9°
C2'C3'C4'104.8°104.2°
C2'C3'O3'110.3°110.5°
C3'C2'H14110.0°110.9°
C2'C3'H15109.7°110.5°
O2'C2'H14112.8°110.8°
C2'O2'H24109.5°114.0°
C4'C3'O3'109.6°110.5°
C3'C4'C5'112.0°109.9°
C3'C4'O4'103.7°107.3°
C4'C3'H15110.0°110.5°
C3'C4'H16109.3°109.9°
O3'C3'H15112.2°110.5°
C3'O3'H25109.5°114.0°
C5C4N3126.2°119.4°
C5C4N9112.0°110.1°
C4C5C6118.1°119.0°
C4C5N7108.1°109.8°
N3C4N9121.7°130.6°
C4N9C8105.0°107.8°
C5'C4'O4'112.2°109.9°
C4'C5'O5'115.3°109.5°
C5'C4'H16108.8°109.9°
C4'C5'H17108.0°109.4°
C4'C5'H18108.0°109.5°
O4'C4'H16110.8°110.0°
C6C5N7133.8°131.2°
C5C6O6134.6°120.6°
C5N7C8104.3°106.7°
C5N7CM7130.4°126.6°
C5'O5'PA119.3°123.0°
O5'C5'H17108.0°109.5°
O5'C5'H18108.0°109.5°
N7C8N9106.8°105.7°
C8N7CM7107.4°126.7°
N7C8H19110.1°110.2°
N7C8H20110.1°110.2°
N9C8H19110.1°110.0°
N9C8H20110.1°110.5°
N7CM7H21109.5°109.5°
N7CM7H22109.5°109.4°
N7CM7H23109.5°109.4°
O1APAO3A120.8°109.5°
O1APAO5'109.7°109.4°
O3APAO5'110.8°109.4°
PAO3AH26109.5°114.0°
CCAHA105.6°109.4°
CACOXT135.1°120.0°
HNH2109.4°111.0°
HB2CBHB3109.5°109.4°
H8N2H9120.0°120.0°
H17C5'H18109.5°109.5°
H19C8H20109.5°110.2°
H21CM7H22109.5°109.5°
H21CM7H23109.4°109.5°
H22CM7H23109.5°109.5°
COXTHXT90.0°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NCACBC109.3°120.0°
NCACBHA135.8°120.0°
NCACO76.3°20.0°
NCACBCG49.8°65.0°
NCACHA115.2°120.0°
CANHH2120.0°124.0°
NCACBHB2169.4°55.0°
NCACBHB369.8°175.0°
NCACOXT147.6°160.0°
CBCACO51.4°100.0°
CACBCGHB2119.6°120.0°
CACBCGHB3119.6°120.0°
CACBCGND163.4°55.0°
CACBCGCD2117.0°124.7°
CBCACHA117.1°120.0°
CBCANH180.0°176.0°
CBCANH260.0°60.0°
CACBHB2HB3121.3°120.0°
CBCACOXT84.7°80.0°
OCCAOXT136.0°180.0°
OCCAHA168.5°140.0°
OCOXTHXT90.0°0.1°
CBCGND1CD2179.6°179.7°
CBCGND1CE1179.8°180.0°
CBCGCD2NE2179.9°180.0°
CGCBCAC59.5°175.0°
CGCBCAHA174.4°55.0°
CGCBHB2HB3121.2°120.0°
CBCGCD2HD20.1°0.0°
ND1CGCD2NE20.2°0.2°
CGND1CE1NE20.1°0.1°
ND1CGCBHB2177.0°175.0°
ND1CGCBHB356.2°65.0°
ND1CGCD2HD2179.8°179.8°
CGND1CE1HE1179.9°179.9°
CD2CGND1CE10.2°0.2°
CGCD2NE2HD2180.0°180.0°
CGCD2NE2CE10.2°0.2°
CGCD2NE2PA179.9°180.0°
CD2CGCBHB22.6°4.7°
CD2CGCBHB3123.4°115.2°
N2C2N1N3179.9°179.8°
N2C2N1C6180.0°180.0°
N2C2N3C4179.8°180.0°
C2N2H8H9180.0°180.0°
N2C2N1H100.0°0.1°
C2N1C6H10180.0°180.0°
N1C2N3C40.3°0.2°
C2N1C6C50.1°0.0°
C2N1C6O6180.0°180.0°
N1C2N2H8179.9°0.1°
N1C2N2H90.1°180.0°
N3C2N1C60.1°0.2°
C2N3C4C50.4°0.0°
C2N3C4N9179.6°179.7°
N3C2N2H80.0°179.7°
N3C2N2H9180.0°0.2°
N3C2N1H10179.9°179.7°
N1C6C5C40.0°0.3°
N1C6C5O6179.9°180.0°
N1C6C5N7179.9°179.9°
ND1CE1NE2CD20.0°0.0°
ND1CE1NE2HE1180.0°180.0°
ND1CE1NE2PA179.8°179.9°
CD2NE2CE1PA179.8°179.8°
CD2NE2PAO1A82.9°65.0°
CD2NE2PAO3A150.0°55.1°
CD2NE2PAO5'32.6°175.0°
CD2NE2CE1HE1180.0°179.9°
CE1NE2PAO1A97.3°115.2°
CE1NE2PAO3A29.8°124.8°
CE1NE2PAO5'147.1°4.8°
CE1NE2CD2HD2179.9°179.8°
NE2PAO5'C5'63.2°175.0°
NE2PAO1AO3A115.9°120.0°
NE2PAO1AO5'113.4°120.0°
NE2PAO3AO5'114.5°120.0°
PANE2CD2HD20.1°0.0°
PANE2CE1HE10.2°0.1°
NE2PAO3AH26115.3°60.0°
C2'C1'N9O4'120.1°114.1°
C2'C1'N9H13118.2°122.9°
C2'C1'O4'H13114.5°118.5°
C1'C2'C3'O2'116.2°118.2°
C1'C2'C3'H14118.9°118.2°
C1'C2'O2'H14121.8°123.6°
C1'C2'C3'C4'12.0°20.9°
C1'C2'C3'O3'129.9°97.8°
C2'C1'N9C4108.5°65.0°
C2'C1'O4'C4'19.6°40.0°
C2'C1'N9C845.5°114.5°
C1'C2'C3'H15106.0°139.6°
C1'C2'O2'H24180.0°179.9°
N9C1'O4'H13120.9°122.9°
N9C1'C2'C3'129.2°155.5°
N9C1'C2'O2'113.0°86.2°
C1'N9C4C5168.5°180.0°
C1'N9C4N312.3°0.3°
C1'N9C4C8156.2°179.6°
N9C1'O4'C4'144.1°158.6°
C1'N9C8N7179.6°180.0°
N9C1'C2'H1410.4°37.3°
C1'N9C8H1960.0°61.1°
C1'N9C8H2060.8°60.9°
O4'C1'C2'C3'3.2°37.0°
O4'C1'C2'O2'121.0°155.3°
C1'O4'C4'C3'27.4°26.5°
O4'C1'N9C4131.4°49.1°
C1'O4'C4'C5'148.4°145.9°
O4'C1'N9C874.6°131.4°
O4'C1'C2'H14115.6°81.2°
C1'O4'C4'H1689.8°93.0°
C3'C2'O2'H14123.2°123.7°
C2'C3'C4'O3'118.4°118.7°
C2'C3'C4'H15117.8°118.7°
C2'C3'O3'H15122.7°122.6°
C2'C3'C4'C5'143.9°121.5°
C2'C3'C4'O4'22.6°2.0°
C3'C2'C1'H13112.5°81.7°
C2'C3'C4'H1695.6°117.5°
C3'C2'O2'H2465.0°67.3°
C2'C3'O3'H25180.0°61.5°
O2'C2'C3'C4'104.2°139.1°
O2'C2'C3'O3'13.6°20.4°
O2'C2'C1'H135.3°36.6°
O2'C2'C3'H15137.8°102.2°
C4'C3'O3'H15122.5°122.6°
C3'C4'C5'O4'116.2°117.8°
C3'C4'C5'H16120.9°121.0°
C3'C4'O4'H16117.1°119.5°
C3'C4'C5'O5'114.3°175.0°
C4'C3'C2'H14131.0°97.3°
C3'C4'C5'H17124.8°55.0°
C3'C4'C5'H186.5°65.0°
C4'C3'O3'H2565.1°176.3°
O3'C3'C4'C5'97.8°119.9°
O3'C3'C4'O4'141.0°120.7°
O3'C3'C2'H14111.2°144.0°
O3'C3'C4'H1622.8°1.2°
C5C4N3N9179.2°179.7°
C4C5C6N7179.9°179.6°
C4C5C6O6179.8°179.7°
C4C5N7C811.2°0.0°
C5C4N9C812.2°0.4°
C4C5N7CM7117.3°180.0°
N3C4C5C60.3°0.3°
N3C4C5N7179.7°180.0°
N3C4N9C8168.5°179.9°
N9C4C5C6179.5°180.0°
N9C4C5N70.4°0.3°
C4N9C8N718.8°0.4°
C4N9C1'H139.7°172.2°
C4N9C8H19100.8°119.3°
C4N9C8H20138.4°118.7°
C5'C4'O4'H16121.8°121.1°
C4'C5'O5'H17120.8°120.0°
C4'C5'O5'H18120.8°120.0°
C4'C5'O5'PA152.2°180.0°
C5'C4'C3'H1526.0°2.8°
C4'C5'H17H18117.3°120.0°
O4'C4'C5'O5'1.8°67.2°
C4'O4'C1'H1395.0°78.5°
O4'C4'C3'H1595.2°116.7°
O4'C4'C5'H17119.0°172.9°
O4'C4'C5'H18122.7°52.8°
C6C5N7C8168.9°179.6°
C6C5N7CM762.6°0.3°
C5C6N1H10180.0°180.0°
N7C5C6O60.2°0.1°
C5N7C8CM7141.4°180.0°
C5N7C8N918.5°0.3°
C5N7C8H19101.0°119.1°
C5N7C8H20138.1°119.1°
C5N7CM7H21180.0°0.0°
C5N7CM7H2260.0°120.0°
C5N7CM7H2360.0°120.0°
C5'O5'PAO1A48.0°55.0°
C5'O5'PAO3A176.2°65.0°
O5'C5'C4'H16124.8°54.0°
O5'C5'H17H18117.4°120.0°
O6C6N1H100.1°0.0°
N7C8N9H19119.6°118.9°
N7C8N9H20119.6°119.1°
N7C8H19H20121.2°121.8°
C8N7CM7H2152.6°180.0°
C8N7CM7H22172.6°60.0°
C8N7CM7H2367.4°60.0°
N9C8N7CM7122.8°179.8°
C8N9C1'H13163.7°8.4°
N9C8H19H20121.2°122.1°
CM7N7C8H19117.6°60.9°
CM7N7C8H203.2°60.9°
N7CM7H21H22120.0°120.0°
N7CM7H21H23120.0°120.0°
N7CM7H22H23120.0°119.9°
O1APAO3AO5'130.2°120.0°
O1APAO3AH260.0°180.0°
PAO5'C5'H1731.3°60.0°
PAO5'C5'H1887.0°60.0°
O5'PAO3AH26130.2°60.0°
CCANH63.4°63.9°
CCANH256.6°60.0°
CCACBHB260.1°65.0°
CCACBHB3179.0°55.0°
CACOXTHXT90.0°180.0°
HNCAHA45.7°56.0°
H2NCAHA165.6°180.0°
HACACBHB254.8°175.0°
HACACBHB366.0°65.0°
HACACOXT32.4°40.0°
H13C1'C2'H14128.7°160.1°
H14C2'C3'H1513.0°21.4°
H14C2'O2'H2458.2°56.4°
H15C3'C4'H16146.6°123.8°
H15C3'O3'H2557.3°61.1°
H16C4'C5'H173.9°66.0°
H16C4'C5'H18114.4°174.0°
H21CM7H22H23120.0°120.0°

223532

PDB entries from 2024-08-07

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