PH6
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C | O | doub | 1.21Å | 1.23Å | |
C | CA | sing | 1.51Å | 1.52Å | |
C | OXT | sing | 1.34Å | 1.34Å | |
CA | CB | sing | 1.54Å | 1.52Å | |
CA | N | sing | 1.49Å | 1.47Å | |
CB | CG | sing | 1.54Å | 1.52Å | |
CG | CD | sing | 1.54Å | 1.51Å | |
CG | C1 | sing | 1.53Å | 1.52Å | |
CD | N | sing | 1.49Å | 1.47Å | |
C1 | C6 | sing | 1.53Å | 1.53Å | |
C1 | C2 | sing | 1.53Å | 1.52Å | |
C6 | C5 | sing | 1.53Å | 1.53Å | |
C5 | C4 | sing | 1.53Å | 1.53Å | |
C4 | C3 | sing | 1.53Å | 1.53Å | |
C3 | C2 | sing | 1.53Å | 1.52Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
CD | HD3 | sing | 1.09Å | 1.10Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
C2 | H21 | sing | 1.09Å | 1.10Å | |
C2 | H22 | sing | 1.09Å | 1.10Å | |
C5 | H51 | sing | 1.09Å | 1.10Å | |
C5 | H52 | sing | 1.09Å | 1.10Å | |
C4 | H41 | sing | 1.09Å | 1.10Å | |
C4 | H42 | sing | 1.09Å | 1.10Å | |
C3 | H31 | sing | 1.09Å | 1.10Å | |
C3 | H32 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 119.3° | 120.0° |
O | C | OXT | 121.1° | 120.0° |
CA | C | OXT | 119.6° | 119.9° |
C | CA | CB | 105.9° | 110.4° |
C | CA | N | 111.4° | 110.4° |
C | CA | HA | 112.7° | 110.4° |
C | OXT | HXT | 109.5° | 117.0° |
CB | CA | N | 99.5° | 104.6° |
CA | CB | CG | 103.8° | 105.1° |
CB | CA | HA | 112.8° | 110.4° |
CA | CB | HB2 | 110.9° | 110.4° |
CA | CB | HB3 | 110.9° | 110.3° |
CA | N | CD | 113.3° | 104.2° |
N | CA | HA | 113.5° | 110.5° |
CA | N | H | 108.5° | 111.0° |
CB | CG | CD | 101.3° | 105.1° |
CB | CG | C1 | 111.6° | 110.3° |
CG | CB | HB2 | 110.9° | 110.3° |
CG | CB | HB3 | 110.9° | 110.3° |
CB | CG | HG2 | 109.9° | 110.4° |
CD | CG | C1 | 113.7° | 110.3° |
CG | CD | N | 102.7° | 104.6° |
CD | CG | HG2 | 110.1° | 110.3° |
CG | CD | HD2 | 111.1° | 110.4° |
CG | CD | HD3 | 111.1° | 110.4° |
CG | C1 | C6 | 113.3° | 109.5° |
CG | C1 | C2 | 109.1° | 109.5° |
C1 | CG | HG2 | 110.0° | 110.4° |
CG | C1 | H1 | 107.7° | 109.5° |
CD | N | H | 108.5° | 111.0° |
N | CD | HD2 | 111.1° | 110.4° |
N | CD | HD3 | 111.1° | 110.4° |
C6 | C1 | C2 | 111.2° | 109.5° |
C1 | C6 | C5 | 112.5° | 109.5° |
C6 | C1 | H1 | 107.6° | 109.5° |
C1 | C6 | H61 | 108.7° | 109.5° |
C1 | C6 | H62 | 108.7° | 109.5° |
C1 | C2 | C3 | 110.1° | 109.5° |
C2 | C1 | H1 | 107.6° | 109.5° |
C1 | C2 | H21 | 109.3° | 109.5° |
C1 | C2 | H22 | 109.3° | 109.4° |
C6 | C5 | C4 | 110.9° | 109.5° |
C5 | C6 | H61 | 108.7° | 109.5° |
C5 | C6 | H62 | 108.7° | 109.4° |
C6 | C5 | H51 | 109.1° | 109.4° |
C6 | C5 | H52 | 109.1° | 109.5° |
C5 | C4 | C3 | 112.1° | 109.5° |
C4 | C5 | H51 | 109.1° | 109.5° |
C4 | C5 | H52 | 109.1° | 109.5° |
C5 | C4 | H41 | 108.8° | 109.5° |
C5 | C4 | H42 | 108.8° | 109.5° |
C4 | C3 | C2 | 110.9° | 109.5° |
C3 | C4 | H41 | 108.8° | 109.4° |
C3 | C4 | H42 | 108.8° | 109.5° |
C4 | C3 | H31 | 109.1° | 109.5° |
C4 | C3 | H32 | 109.1° | 109.5° |
C3 | C2 | H21 | 109.3° | 109.5° |
C3 | C2 | H22 | 109.3° | 109.5° |
C2 | C3 | H31 | 109.1° | 109.5° |
C2 | C3 | H32 | 109.1° | 109.5° |
HB2 | CB | HB3 | 109.5° | 110.3° |
HD2 | CD | HD3 | 109.4° | 110.5° |
H61 | C6 | H62 | 109.5° | 109.4° |
H21 | C2 | H22 | 109.4° | 109.5° |
H51 | C5 | H52 | 109.5° | 109.5° |
H41 | C4 | H42 | 109.5° | 109.5° |
H31 | C3 | H32 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 179.1° | 179.7° |
O | C | CA | CB | 103.1° | 100.0° |
O | C | CA | N | 4.2° | 15.2° |
O | C | CA | HA | 133.1° | 137.6° |
O | C | OXT | HXT | 0.0° | 0.0° |
C | CA | CB | N | 115.6° | 118.8° |
C | CA | CB | HA | 123.7° | 122.4° |
C | CA | N | HA | 128.6° | 122.4° |
C | CA | CB | CG | 78.2° | 142.6° |
C | CA | N | CD | 93.9° | 158.3° |
CA | C | OXT | HXT | 179.1° | 179.7° |
C | CA | CB | HB2 | 40.9° | 23.7° |
C | CA | CB | HB3 | 162.7° | 98.5° |
C | CA | N | H | 145.5° | 82.2° |
OXT | C | CA | CB | 76.0° | 79.7° |
OXT | C | CA | N | 176.7° | 165.1° |
OXT | C | CA | HA | 47.8° | 42.7° |
CB | CA | N | HA | 120.1° | 118.8° |
CA | CB | CG | HB2 | 119.1° | 118.9° |
CA | CB | CG | HB3 | 119.1° | 118.9° |
CA | CB | CG | CD | 44.6° | 0.0° |
CA | CB | CG | C1 | 165.8° | 118.9° |
CB | CA | N | CD | 17.4° | 39.5° |
CA | CB | HB2 | HB3 | 122.6° | 122.2° |
CB | CA | N | H | 103.1° | 159.0° |
CA | CB | CG | HG2 | 71.9° | 118.9° |
N | CA | CB | CG | 37.4° | 23.8° |
CA | N | CD | CG | 9.6° | 39.4° |
CA | N | CD | H | 120.6° | 119.6° |
N | CA | CB | HB2 | 156.6° | 95.0° |
N | CA | CB | HB3 | 81.7° | 142.8° |
CA | N | CD | HD2 | 128.5° | 158.2° |
CA | N | CD | HD3 | 109.3° | 79.3° |
CB | CG | CD | C1 | 119.8° | 118.9° |
CB | CG | CD | HG2 | 116.3° | 118.9° |
CB | CG | C1 | HG2 | 122.2° | 122.2° |
CB | CG | CD | N | 32.3° | 23.8° |
CB | CG | C1 | C6 | 154.5° | 180.0° |
CB | CG | C1 | C2 | 81.0° | 60.0° |
CG | CB | CA | HA | 158.1° | 95.1° |
CG | CB | HB2 | HB3 | 122.6° | 122.1° |
CB | CG | CD | HD2 | 151.2° | 142.6° |
CB | CG | CD | HD3 | 86.6° | 94.9° |
CB | CG | C1 | H1 | 35.6° | 60.0° |
CD | CG | C1 | HG2 | 124.0° | 122.1° |
CG | CD | N | HD2 | 118.9° | 118.8° |
CG | CD | N | HD3 | 118.9° | 118.8° |
CD | CG | C1 | C6 | 40.7° | 64.3° |
CD | CG | C1 | C2 | 165.3° | 175.7° |
CD | CG | CB | HB2 | 163.7° | 118.9° |
CD | CG | CB | HB3 | 74.5° | 118.9° |
CG | CD | N | H | 130.2° | 159.0° |
CG | CD | HD2 | HD3 | 123.1° | 122.5° |
CD | CG | C1 | H1 | 78.2° | 55.7° |
C1 | CG | CD | N | 152.1° | 142.7° |
CG | C1 | C6 | C2 | 123.4° | 120.0° |
CG | C1 | C6 | H1 | 119.0° | 120.0° |
CG | C1 | C2 | H1 | 116.6° | 120.0° |
CG | C1 | C6 | C5 | 111.2° | 180.0° |
CG | C1 | C2 | C3 | 173.5° | 180.0° |
C1 | CG | CB | HB2 | 75.1° | 122.2° |
C1 | CG | CB | HB3 | 46.7° | 0.0° |
C1 | CG | CD | HD2 | 89.0° | 98.5° |
C1 | CG | CD | HD3 | 33.1° | 24.0° |
CG | C1 | C6 | H61 | 128.3° | 60.0° |
CG | C1 | C6 | H62 | 9.3° | 60.0° |
CG | C1 | C2 | H21 | 53.4° | 60.0° |
CG | C1 | C2 | H22 | 66.4° | 60.0° |
CD | N | CA | HA | 137.5° | 79.4° |
N | CD | CG | HG2 | 84.0° | 95.1° |
N | CD | HD2 | HD3 | 123.1° | 122.4° |
C6 | C1 | C2 | H1 | 117.6° | 120.0° |
C1 | C6 | C5 | H61 | 120.4° | 120.0° |
C1 | C6 | C5 | H62 | 120.5° | 120.0° |
C1 | C6 | C5 | C4 | 59.2° | 60.0° |
C6 | C1 | C2 | C3 | 47.7° | 60.0° |
C6 | C1 | CG | HG2 | 83.3° | 57.8° |
C1 | C6 | H61 | H62 | 118.6° | 120.0° |
C6 | C1 | C2 | H21 | 72.4° | 60.0° |
C6 | C1 | C2 | H22 | 167.8° | 180.0° |
C1 | C6 | C5 | H51 | 179.4° | 60.0° |
C1 | C6 | C5 | H52 | 61.0° | 180.0° |
C2 | C1 | C6 | C5 | 12.2° | 60.0° |
C1 | C2 | C3 | C4 | 63.9° | 60.0° |
C1 | C2 | C3 | H21 | 120.1° | 120.0° |
C1 | C2 | C3 | H22 | 120.1° | 120.0° |
C2 | C1 | CG | HG2 | 41.3° | 62.2° |
C2 | C1 | C6 | H61 | 108.3° | 180.0° |
C2 | C1 | C6 | H62 | 132.7° | 60.0° |
C1 | C2 | H21 | H22 | 119.7° | 119.9° |
C1 | C2 | C3 | H31 | 56.3° | 60.0° |
C1 | C2 | C3 | H32 | 175.9° | 180.0° |
C6 | C5 | C4 | H51 | 120.2° | 120.0° |
C6 | C5 | C4 | H52 | 120.2° | 120.0° |
C6 | C5 | C4 | C3 | 42.8° | 60.0° |
C5 | C6 | C1 | H1 | 129.8° | 60.0° |
C5 | C6 | H61 | H62 | 118.6° | 120.0° |
C6 | C5 | H51 | H52 | 119.3° | 120.0° |
C6 | C5 | C4 | H41 | 77.6° | 180.0° |
C6 | C5 | C4 | H42 | 163.2° | 60.0° |
C5 | C4 | C3 | H41 | 120.4° | 120.0° |
C5 | C4 | C3 | H42 | 120.4° | 120.0° |
C5 | C4 | C3 | C2 | 16.4° | 60.0° |
C4 | C5 | C6 | H61 | 61.3° | 180.0° |
C4 | C5 | C6 | H62 | 179.7° | 60.0° |
C4 | C5 | H51 | H52 | 119.4° | 120.0° |
C5 | C4 | H41 | H42 | 118.8° | 120.0° |
C5 | C4 | C3 | H31 | 103.8° | 60.0° |
C5 | C4 | C3 | H32 | 136.6° | 180.0° |
C4 | C3 | C2 | H31 | 120.2° | 120.0° |
C4 | C3 | C2 | H32 | 120.2° | 120.0° |
C4 | C3 | C2 | H21 | 56.2° | 60.0° |
C4 | C3 | C2 | H22 | 175.9° | 180.0° |
C3 | C4 | C5 | H51 | 163.0° | 60.0° |
C3 | C4 | C5 | H52 | 77.4° | 180.0° |
C3 | C4 | H41 | H42 | 118.8° | 120.0° |
C4 | C3 | H31 | H32 | 119.3° | 120.0° |
C3 | C2 | C1 | H1 | 69.9° | 60.0° |
C3 | C2 | H21 | H22 | 119.7° | 120.0° |
C2 | C3 | C4 | H41 | 136.8° | 180.0° |
C2 | C3 | C4 | H42 | 104.0° | 60.0° |
C2 | C3 | H31 | H32 | 119.4° | 120.0° |
HA | CA | CB | HB2 | 82.8° | 146.1° |
HA | CA | CB | HB3 | 39.0° | 23.9° |
HA | CA | N | H | 16.9° | 40.2° |
HB2 | CB | CG | HG2 | 47.2° | 0.0° |
HB3 | CB | CG | HG2 | 169.0° | 122.2° |
H | N | CD | HD2 | 110.9° | 82.2° |
H | N | CD | HD3 | 11.3° | 40.3° |
HG2 | CG | CD | HD2 | 34.9° | 23.7° |
HG2 | CG | CD | HD3 | 157.1° | 146.2° |
HG2 | CG | C1 | H1 | 157.8° | 177.8° |
H1 | C1 | C6 | H61 | 9.4° | 60.0° |
H1 | C1 | C6 | H62 | 109.7° | NaN° |
H1 | C1 | C2 | H21 | 170.0° | NaN° |
H1 | C1 | C2 | H22 | 50.2° | 60.0° |
H61 | C6 | C5 | H51 | 58.9° | 60.0° |
H61 | C6 | C5 | H52 | 178.5° | 60.0° |
H62 | C6 | C5 | H51 | 60.1° | NaN° |
H62 | C6 | C5 | H52 | 59.4° | 60.0° |
H21 | C2 | C3 | H31 | 176.4° | 180.0° |
H21 | C2 | C3 | H32 | 64.0° | 60.0° |
H22 | C2 | C3 | H31 | 63.9° | 60.0° |
H22 | C2 | C3 | H32 | 55.8° | 60.0° |
H51 | C5 | C4 | H41 | 42.7° | 60.0° |
H51 | C5 | C4 | H42 | 76.6° | 180.0° |
H52 | C5 | C4 | H41 | 162.2° | 60.0° |
H52 | C5 | C4 | H42 | 43.0° | 60.0° |
H41 | C4 | C3 | H31 | 16.6° | 60.0° |
H41 | C4 | C3 | H32 | 103.0° | 59.9° |
H42 | C4 | C3 | H31 | 135.8° | 180.0° |
H42 | C4 | C3 | H32 | 16.3° | 60.0° |