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PGZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1BC1Bdoub1.22Å1.23Å
C1BC5Bsing1.48Å1.50Å
C1BN1Bsing1.35Å1.34Å
C5BC6Bsing1.40Å1.40ÅAromatic
C5BC4Bdoub1.40Å1.40ÅAromatic
C6BC7Bdoub1.38Å1.40ÅAromatic
C7BC2Bsing1.38Å1.40ÅAromatic
C2BC8Bsing1.51Å1.51Å
C2BC3Bdoub1.38Å1.39ÅAromatic
C3BC4Bsing1.38Å1.40ÅAromatic
N1BC3Asing1.46Å1.46Å
C3AC4Asing1.53Å1.53Å
C3AC2Asing1.53Å1.53Å
C4AO4Asing1.43Å1.44Å
C4AC2Dsing1.53Å1.53Å
C2DC6Asing1.53Å1.52Å
C2DO5Asing1.43Å1.43Å
C6AO6Asing1.43Å1.44Å
O5AC1Asing1.43Å1.44Å
C1AS1Dsing1.81Å1.77Å
C1AC2Asing1.53Å1.53Å
S1DC1Dsing1.81Å1.76Å
C2AO4Psing1.43Å1.42Å
O4PPsing1.61Å1.61Å
PO3Psing1.61Å1.51Å
PO2Pdoub1.48Å1.51Å
PO1Psing1.61Å1.61Å
O1PC1Csing1.43Å1.42Å
C1CC5Csing1.51Å1.51Å
C5CC6Csing1.38Å1.40ÅAromatic
C5CC4Cdoub1.38Å1.40ÅAromatic
C6CC7Cdoub1.38Å1.40ÅAromatic
C7CC2Csing1.38Å1.40ÅAromatic
C2CC3Cdoub1.38Å1.40ÅAromatic
N1BH1Bsing0.97Å1.00Å
C6BH6Bsing1.08Å1.08Å
C4BH4Bsing1.08Å1.08Å
C7BH7Bsing1.08Å1.08Å
C8BH8B1sing1.09Å1.10Å
C8BH8B2sing1.09Å1.10Å
C8BH8B3sing1.09Å1.10Å
C3BH3Bsing1.08Å1.08Å
C3AH3Asing1.09Å1.10Å
C4AH4Asing1.09Å1.10Å
C2AH2Asing1.09Å1.10Å
O4AHAsing0.97Å0.95Å
C2DH2Dsing1.09Å1.10Å
C6AH6A1sing1.09Å1.10Å
C6AH6A2sing1.09Å1.10Å
O6AH6Asing0.97Å0.95Å
C1AH1Asing1.09Å1.10Å
C1DH1D1sing1.09Å1.10Å
C1DH1D2sing1.09Å1.10Å
C1DH1D3sing1.09Å1.10Å
O3PH3Psing0.97Å0.95Å
C1CH1C1sing1.09Å1.10Å
C1CH1C2sing1.09Å1.10Å
C6CH6Csing1.08Å1.08Å
C4CH4Csing1.08Å1.08Å
C7CH7Csing1.08Å1.08Å
C2CH2Csing1.08Å1.08Å
C3CH3Csing1.08Å1.08Å
C4CC3Csing1.38Å1.39ÅAromatic
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1BC1BC5B118.4°120.0°
O1BC1BN1B121.7°120.0°
C5BC1BN1B119.8°120.0°
C1BC5BC6B120.8°120.1°
C1BC5BC4B119.8°120.1°
C1BN1BC3A120.8°120.0°
C1BN1BH1B119.6°120.0°
C6BC5BC4B119.4°119.7°
C5BC6BC7B120.4°119.8°
C5BC6BH6B119.8°120.1°
C5BC4BC3B120.4°119.9°
C5BC4BH4B119.8°120.1°
C6BC7BC2B119.8°120.1°
C7BC6BH6B119.8°120.1°
C6BC7BH7B120.1°119.9°
C7BC2BC8B119.5°119.8°
C7BC2BC3B120.2°120.3°
C2BC7BH7B120.1°119.9°
C8BC2BC3B120.3°119.9°
C2BC8BH8B1109.5°109.5°
C2BC8BH8B2109.5°109.5°
C2BC8BH8B3109.5°109.5°
C2BC3BC4B119.8°120.1°
C2BC3BH3B120.1°119.9°
C3BC4BH4B119.8°120.0°
C4BC3BH3B120.1°119.9°
N1BC3AC4A106.6°109.6°
N1BC3AC2A110.9°109.6°
C3AN1BH1B119.6°119.9°
N1BC3AH3A110.3°109.5°
C4AC3AC2A110.1°109.0°
C3AC4AO4A111.0°109.5°
C3AC4AC2D106.6°109.2°
C4AC3AH3A109.4°109.6°
C3AC4AH4A108.8°109.5°
C3AC2AC1A108.0°109.2°
C3AC2AO4P108.4°109.5°
C2AC3AH3A109.4°109.6°
C3AC2AH2A109.8°109.5°
O4AC4AC2D111.3°109.5°
O4AC4AH4A110.1°109.5°
C4AO4AHA109.5°114.0°
C4AC2DC6A112.6°109.5°
C4AC2DO5A109.7°109.4°
C2DC4AH4A108.9°109.6°
C4AC2DH2D107.9°109.5°
C6AC2DO5A109.6°109.5°
C2DC6AO6A109.2°109.5°
C6AC2DH2D107.9°109.5°
C2DC6AH6A1109.5°109.4°
C2DC6AH6A2109.6°109.5°
C2DO5AC1A113.7°114.1°
O5AC2DH2D109.1°109.5°
O6AC6AH6A1109.5°109.5°
O6AC6AH6A2109.6°109.5°
C6AO6AH6A109.5°114.0°
O5AC1AS1D108.8°109.5°
O5AC1AC2A110.3°109.4°
O5AC1AH1A110.2°109.5°
S1DC1AC2A112.0°109.5°
C1AS1DC1D107.3°103.0°
S1DC1AH1A106.4°109.4°
C1AC2AO4P109.3°109.5°
C1AC2AH2A109.8°109.5°
C2AC1AH1A109.0°109.5°
S1DC1DH1D1109.5°109.4°
S1DC1DH1D2109.5°109.4°
S1DC1DH1D3109.5°109.5°
C2AO4PP121.4°123.0°
O4PC2AH2A111.4°109.6°
O4PPO3P105.8°109.5°
O4PPO2P110.2°109.5°
O4PPO1P102.1°109.5°
O3PPO2P120.2°109.5°
O3PPO1P109.5°109.5°
PO3PH3P109.5°114.0°
O2PPO1P107.6°109.5°
PO1PC1C120.9°123.0°
O1PC1CC5C109.6°109.5°
O1PC1CH1C1109.5°109.4°
O1PC1CH1C2109.4°109.5°
C1CC5CC6C119.9°120.0°
C1CC5CC4C119.3°120.0°
C5CC1CH1C1109.4°109.5°
C5CC1CH1C2109.4°109.5°
C6CC5CC4C120.8°120.0°
C5CC6CC7C119.4°120.0°
C5CC6CH6C120.3°120.0°
C5CC4CH4C120.1°120.1°
C5CC4CC3C119.7°120.0°
C6CC7CC2C119.9°120.0°
C7CC6CH6C120.3°120.1°
C6CC7CH7C120.1°120.0°
C7CC2CC3C120.7°120.0°
C2CC7CH7C120.1°120.0°
C7CC2CH2C119.6°120.0°
C3CC2CH2C119.7°120.0°
C2CC3CH3C120.2°119.9°
C2CC3CC4C119.5°120.0°
H8B1C8BH8B2109.5°109.4°
H8B1C8BH8B3109.5°109.5°
H8B2C8BH8B3109.4°109.5°
H6A1C6AH6A2109.5°109.4°
H1D1C1DH1D2109.4°109.5°
H1D1C1DH1D3109.5°109.5°
H1D2C1DH1D3109.4°109.5°
H1C1C1CH1C2109.5°109.4°
H4CC4CC3C120.1°120.0°
H3CC3CC4C120.2°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1BC1BC5BN1B178.8°179.7°
O1BC1BC5BC6B178.8°0.0°
O1BC1BC5BC4B1.4°179.7°
O1BC1BN1BC3A0.7°0.0°
O1BC1BN1BH1B179.2°180.0°
C1BC5BC6BC4B177.5°179.7°
C1BC5BC6BC7B178.6°180.0°
C1BC5BC4BC3B179.0°179.7°
C5BC1BN1BC3A178.1°179.7°
C5BC1BN1BH1B1.9°0.3°
C1BC5BC6BH6B1.4°0.1°
C1BC5BC4BH4B1.0°0.1°
N1BC1BC5BC6B0.0°179.7°
N1BC1BC5BC4B177.5°0.0°
C1BN1BC3AH1B180.0°179.9°
C1BN1BC3AC4A120.0°85.0°
C1BN1BC3AC2A120.1°155.5°
C1BN1BC3AH3A1.3°35.2°
C5BC6BC7BH6B180.0°179.9°
C5BC6BC7BC2B0.1°0.0°
C6BC5BC4BC3B1.5°0.6°
C6BC5BC4BH4B178.5°179.8°
C5BC6BC7BH7B179.9°179.9°
C4BC5BC6BC7B1.2°0.3°
C5BC4BC3BC2B0.7°0.5°
C5BC4BC3BH4B180.0°179.6°
C4BC5BC6BH6B178.8°179.7°
C5BC4BC3BH3B179.3°179.6°
C6BC7BC2BH7B180.0°180.0°
C6BC7BC2BC8B179.9°180.0°
C6BC7BC2BC3B0.6°0.1°
C7BC2BC8BC3B179.4°180.0°
C7BC2BC3BC4B0.3°0.2°
C2BC7BC6BH6B179.9°180.0°
C7BC2BC8BH8B189.8°90.0°
C7BC2BC8BH8B2150.3°150.0°
C7BC2BC8BH8B330.3°30.0°
C7BC2BC3BH3B179.7°179.9°
C8BC2BC3BC4B179.8°179.7°
C8BC2BC7BH7B0.1°0.0°
C2BC8BH8B1H8B2120.0°120.0°
C2BC8BH8B1H8B3120.0°120.1°
C2BC8BH8B2H8B3120.0°120.1°
C8BC2BC3BH3B0.2°0.1°
C2BC3BC4BH3B180.0°179.8°
C2BC3BC4BH4B179.3°179.8°
C3BC2BC7BH7B179.4°179.9°
C3BC2BC8BH8B189.7°89.9°
C3BC2BC8BH8B230.3°30.0°
C3BC2BC8BH8B3150.2°150.0°
N1BC3AC4AC2A120.4°119.9°
N1BC3AC4AH3A119.3°120.2°
N1BC3AC2AH3A121.9°120.2°
N1BC3AC4AO4A59.2°56.9°
N1BC3AC4AC2D179.4°176.9°
N1BC3AC2AC1A176.1°176.8°
N1BC3AC2AO4P65.5°63.2°
N1BC3AC4AH4A62.1°63.2°
N1BC3AC2AH2A56.4°57.0°
C4AC3AC2AH3A120.3°119.9°
C3AC4AO4AC2D118.6°119.7°
C3AC4AO4AH4A120.5°120.1°
C3AC4AC2DH4A117.3°119.9°
C3AC4AC2DC6A177.6°177.6°
C3AC4AC2DO5A60.1°57.6°
C4AC3AC2AC1A58.3°56.9°
C4AC3AC2AO4P176.7°176.9°
C4AC3AN1BH1B60.1°94.9°
C4AC3AC2AH2A61.4°62.9°
C3AC4AO4AHA180.0°180.0°
C3AC4AC2DH2D58.7°62.4°
C2AC3AC4AO4A61.3°63.0°
C2AC3AC4AC2D60.1°57.0°
C3AC2AC1AO5A55.7°57.6°
C3AC2AC1AS1D177.1°177.6°
C3AC2AC1AO4P117.8°119.9°
C3AC2AC1AH2A119.7°119.9°
C3AC2AO4PH2A120.9°120.2°
C3AC2AO4PP117.7°120.0°
C2AC3AN1BH1B59.9°24.6°
C2AC3AC4AH4A177.5°176.9°
C3AC2AC1AH1A65.4°62.4°
O4AC4AC2DH4A121.5°120.2°
O4AC4AC2DC6A61.2°57.7°
O4AC4AC2DO5A61.1°62.3°
O4AC4AC3AH3A178.4°177.1°
O4AC4AC2DH2D179.9°177.7°
C4AC2DC6AO5A122.4°119.9°
C4AC2DC6AH2D118.9°120.1°
C4AC2DO5AH2D118.0°120.0°
C4AC2DC6AO6A178.3°175.0°
C4AC2DO5AC1A61.8°61.2°
C2DC4AC3AH3A60.1°62.9°
C2DC4AO4AHA61.4°60.3°
C4AC2DC6AH6A158.4°55.0°
C4AC2DC6AH6A261.7°64.9°
C6AC2DO5AH2D117.9°120.0°
C2DC6AO6AH6A1119.9°120.0°
C2DC6AO6AH6A2120.0°120.1°
C6AC2DO5AC1A174.1°178.9°
C6AC2DC4AH4A60.3°62.5°
C2DC6AH6A1H6A2120.1°120.0°
C2DC6AO6AH6A180.0°180.0°
O5AC2DC6AO6A59.3°65.1°
C2DO5AC1AS1D177.4°178.8°
C2DO5AC1AC2A59.4°61.2°
O5AC2DC4AH4A177.4°177.5°
O5AC2DC6AH6A1179.2°174.9°
O5AC2DC6AH6A260.7°55.0°
C2DO5AC1AH1A61.1°58.8°
O6AC6AC2DH2D59.5°54.9°
O6AC6AH6A1H6A2120.1°120.0°
O5AC1AS1DC2A122.2°120.0°
O5AC1AS1DH1A118.8°120.0°
O5AC1AC2AH1A121.2°120.0°
O5AC1AS1DC1D68.5°65.0°
O5AC1AC2AO4P173.5°177.5°
O5AC1AC2AH2A64.0°62.3°
C1AO5AC2DH2D56.2°58.8°
S1DC1AC2AH1A117.5°120.0°
S1DC1AC2AO4P65.1°62.4°
S1DC1AC2AH2A57.4°57.7°
C1AS1DC1DH1D1180.0°60.0°
C1AS1DC1DH1D260.0°179.9°
C1AS1DC1DH1D360.0°60.0°
C2AC1AS1DC1D169.3°175.0°
C1AC2AO4PH2A121.5°120.1°
C1AC2AO4PP124.7°120.3°
C1AC2AC3AH3A62.0°63.0°
C1DS1DC1AH1A50.3°55.1°
S1DC1DH1D1H1D2120.0°120.0°
S1DC1DH1D1H1D3120.0°120.0°
S1DC1DH1D2H1D3120.0°120.0°
C2AO4PPO3P147.8°65.0°
C2AO4PPO2P16.4°55.0°
C2AO4PPO1P97.7°175.0°
O4PC2AC3AH3A56.4°57.0°
O4PC2AC1AH1A52.4°57.5°
O4PPO3PO2P125.4°120.0°
O4PPO3PO1P109.4°120.0°
O4PPO2PO1P110.6°120.0°
O4PPO1PC1C66.5°175.0°
PO4PC2AH2A3.2°0.2°
O4PPO3PH3P125.4°60.1°
O3PPO2PO1P126.1°120.0°
O3PPO1PC1C45.3°65.0°
O2PPO1PC1C177.5°55.0°
O2PPO3PH3P0.0°180.0°
PO1PC1CC5C177.1°180.0°
O1PPO3PH3P125.2°60.0°
PO1PC1CH1C157.1°60.0°
PO1PC1CH1C262.9°59.9°
O1PC1CC5CH1C1120.0°120.0°
O1PC1CC5CH1C2120.0°120.0°
O1PC1CC5CC6C57.8°90.0°
O1PC1CC5CC4C122.4°90.3°
O1PC1CH1C1H1C2120.0°119.9°
C1CC5CC6CC4C179.8°179.8°
C1CC5CC6CC7C179.8°180.0°
C5CC1CH1C1H1C2119.9°120.0°
C1CC5CC6CH6C0.2°0.0°
C1CC5CC4CH4C0.1°0.1°
C1CC5CC4CC3C179.9°179.8°
C5CC6CC7CH6C180.0°180.0°
C5CC6CC7CC2C0.0°0.0°
C6CC5CC1CH1C162.2°30.0°
C6CC5CC1CH1C2177.8°150.0°
C6CC5CC4CH4C179.9°179.7°
C5CC6CC7CH7C180.0°180.0°
C6CC5CC4CC3C0.1°0.4°
C4CC5CC6CC7C0.0°0.2°
C5CC4CC3CC2C0.1°0.4°
C4CC5CC1CH1C1117.5°149.7°
C4CC5CC1CH1C22.4°29.7°
C4CC5CC6CH6C180.0°179.7°
C5CC4CH4CC3C180.0°179.9°
C5CC4CC3CH3C179.9°179.7°
C6CC7CC2CH7C180.0°179.9°
C6CC7CC2CC3C0.0°0.0°
C6CC7CC2CH2C180.0°179.9°
C7CC2CC3CH2C180.0°180.0°
C2CC7CC6CH6C179.9°180.0°
C7CC2CC3CH3C180.0°179.9°
C7CC2CC3CC4C0.0°0.2°
C2CC3CC4CH4C179.9°179.7°
C3CC2CC7CH7C180.0°180.0°
C2CC3CH3CC4C180.0°179.9°
H1BN1BC3AH3A178.7°144.8°
H6BC6BC7BH7B0.1°0.0°
H4BC4BC3BH3B0.7°0.0°
H8B1C8BH8B2H8B3120.0°119.9°
H3AC3AC4AH4A57.2°57.0°
H3AC3AC2AH2A178.3°177.2°
H4AC4AO4AHA59.5°59.9°
H4AC4AC2DH2D58.6°57.5°
H2AC2AC1AH1A174.9°177.7°
H2DC2DC6AH6A160.5°65.1°
H2DC2DC6AH6A2179.4°175.0°
H6A1C6AO6AH6A60.1°60.1°
H6A2C6AO6AH6A60.0°59.9°
H1D1C1DH1D2H1D3120.0°120.1°
H6CC6CC7CH7C0.0°0.1°
H4CC4CC3CH3C0.1°0.2°
H7CC7CC2CH2C0.0°0.0°
H2CC2CC3CH3C0.0°0.0°
H2CC2CC3CC4C179.9°179.8°

248636

PDB entries from 2026-02-04

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