Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PGM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1sing1.43Å1.41Å
C1C2sing1.53Å1.47Å
C1HC11sing1.09Å1.12Å
C1HC12sing1.09Å1.12Å
O1HO1sing0.97Å0.95Å
C2O2sing1.43Å1.41Å
C2C3sing1.53Å1.46Å
C2HC2sing1.09Å1.11Å
O2HO2sing0.97Å0.95Å
C3O4sing1.43Å1.43Å
C3HC31sing1.09Å1.11Å
C3HC32sing1.09Å1.12Å
O4P5sing1.61Å1.60Å
P5O5Adoub1.55Å1.48Å
P5O5Bsing1.55Å1.48Å
P5O6sing1.61Å1.60Å
O6C7sing1.43Å1.49Å
C7C8sing1.53Å1.46Å
C7HC71sing1.09Å1.11Å
C7HC72sing1.09Å1.11Å
C8O8sing1.43Å1.41Å
C8C9sing1.53Å1.44Å
C8HC8sing1.09Å1.12Å
O8HO8sing0.97Å0.95Å
C9OQ2sing1.45Å1.49Å
C9HC91sing1.09Å1.12Å
C9HC92sing1.09Å1.11Å
OQ1CAdoub1.21Å1.28Å
OQ2CAsing1.34Å1.19Å
CACBsing1.51Å1.47Å
CBCCsing1.53Å1.51Å
CBHCB1sing1.09Å1.11Å
CBHCB2sing1.09Å1.12Å
CCCDsing1.53Å1.50Å
CCHCC1sing1.09Å1.11Å
CCHCC2sing1.09Å1.12Å
CDCEsing1.53Å1.50Å
CDHCD1sing1.09Å1.11Å
CDHCD2sing1.09Å1.11Å
CECFsing1.53Å1.50Å
CEHCE1sing1.09Å1.12Å
CEHCE2sing1.09Å1.11Å
CFCGsing1.53Å1.50Å
CFHCF1sing1.09Å1.11Å
CFHCF2sing1.09Å1.11Å
CGCHsing1.53Å1.49Å
CGHCG1sing1.09Å1.11Å
CGHCG2sing1.09Å1.11Å
CHCIsing1.53Å1.49Å
CHHCH1sing1.09Å1.11Å
CHHCH2sing1.09Å1.11Å
CICJsing1.53Å1.49Å
CIHCI1sing1.09Å1.11Å
CIHCI2sing1.09Å1.12Å
CJCKsing1.53Å1.49Å
CJHCJ1sing1.09Å1.11Å
CJHCJ2sing1.09Å1.11Å
CKCLsing1.53Å1.50Å
CKHCK1sing1.09Å1.11Å
CKHCK2sing1.09Å1.12Å
CLCMsing1.53Å1.50Å
CLHCL1sing1.09Å1.12Å
CLHCL2sing1.09Å1.11Å
CMCNsing1.53Å1.50Å
CMHCM1sing1.09Å1.12Å
CMHCM2sing1.09Å1.11Å
CNCOsing1.53Å1.50Å
CNHCN1sing1.09Å1.11Å
CNHCN2sing1.09Å1.12Å
COCPsing1.53Å1.50Å
COHCO1sing1.09Å1.11Å
COHCO2sing1.09Å1.12Å
CPHCP1sing1.09Å1.11Å
CPHCP2sing1.09Å1.11Å
CPHCP3sing1.09Å1.11Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2109.1°109.5°
O1C1HC11112.4°109.5°
O1C1HC12112.4°109.4°
C1O1HO1109.1°114.0°
C2C1HC11112.3°109.5°
C2C1HC12112.3°109.5°
C1C2O2109.1°109.5°
C1C2C3112.0°109.4°
C1C2HC2108.0°109.5°
HC11C1HC1298.0°109.5°
O2C2C3109.1°109.5°
O2C2HC2110.9°109.5°
C2O2HO2109.1°114.0°
C3C2HC2107.9°109.5°
C2C3O4108.4°109.5°
C2C3HC31112.6°109.5°
C2C3HC32112.6°109.5°
O4C3HC31112.6°109.5°
O4C3HC32112.6°109.5°
C3O4P5118.4°123.0°
HC31C3HC3297.9°109.5°
O4P5O5A109.2°109.5°
O4P5O5B108.5°109.4°
O4P5O6104.8°109.5°
O5AP5O5B117.9°109.4°
O5AP5O6107.9°109.5°
O5BP5O6107.8°109.4°
P5O6C7119.0°123.1°
O6C7C8114.5°109.5°
O6C7HC71110.4°109.5°
O6C7HC72110.4°109.5°
C8C7HC71110.3°109.5°
C8C7HC72110.3°109.5°
C7C8O8117.1°109.5°
C7C8C9112.0°109.5°
C7C8HC8101.9°109.5°
HC71C7HC7299.9°109.4°
O8C8C9109.1°109.5°
O8C8HC8105.2°109.4°
C8O8HO8117.1°114.0°
C9C8HC8111.1°109.5°
C8C9OQ2110.9°109.4°
C8C9HC91111.7°109.5°
C8C9HC92111.7°109.4°
OQ2C9HC91111.6°109.5°
OQ2C9HC92111.7°109.5°
C9OQ2CA119.1°116.9°
HC91C9HC9298.8°109.5°
OQ1CAOQ2121.4°120.0°
OQ1CACB115.6°120.0°
OQ2CACB122.7°119.9°
CACBCC116.1°109.4°
CACBHCB1109.8°109.5°
CACBHCB2109.8°109.5°
CCCBHCB1109.8°109.4°
CCCBHCB2109.8°109.4°
CBCCCD114.8°109.5°
CBCCHCC1110.3°109.4°
CBCCHCC2110.3°109.5°
HCB1CBHCB2100.3°109.5°
CDCCHCC1110.3°109.5°
CDCCHCC2110.3°109.5°
CCCDCE114.1°109.5°
CCCDHCD1110.5°109.5°
CCCDHCD2110.5°109.5°
HCC1CCHCC2100.0°109.5°
CECDHCD1110.5°109.4°
CECDHCD2110.5°109.4°
CDCECF114.3°109.5°
CDCEHCE1110.5°109.5°
CDCEHCE2110.5°109.5°
HCD1CDHCD299.8°109.5°
CFCEHCE1110.4°109.5°
CFCEHCE2110.5°109.4°
CECFCG114.6°109.5°
CECFHCF1110.4°109.5°
CECFHCF2110.4°109.5°
HCE1CEHCE299.8°109.5°
CGCFHCF1110.3°109.5°
CGCFHCF2110.3°109.4°
CFCGCH115.2°109.5°
CFCGHCG1110.2°109.5°
CFCGHCG2110.2°109.4°
HCF1CFHCF299.9°109.5°
CHCGHCG1110.2°109.5°
CHCGHCG2110.1°109.5°
CGCHCI115.1°109.4°
CGCHHCH1110.1°109.5°
CGCHHCH2110.1°109.5°
HCG1CGHCG2100.0°109.4°
CICHHCH1110.1°109.5°
CICHHCH2110.2°109.5°
CHCICJ114.7°109.4°
CHCIHCI1110.3°109.5°
CHCIHCI2110.3°109.5°
HCH1CHHCH2100.1°109.5°
CJCIHCI1110.3°109.5°
CJCIHCI2110.3°109.5°
CICJCK115.5°109.5°
CICJHCJ1110.0°109.5°
CICJHCJ2110.0°109.5°
HCI1CIHCI299.9°109.5°
CKCJHCJ1110.0°109.5°
CKCJHCJ2110.0°109.5°
CJCKCL115.2°109.5°
CJCKHCK1110.1°109.4°
CJCKHCK2110.1°109.4°
HCJ1CJHCJ2100.3°109.4°
CLCKHCK1110.2°109.5°
CLCKHCK2110.2°109.5°
CKCLCM115.3°109.5°
CKCLHCL1110.1°109.5°
CKCLHCL2110.1°109.5°
HCK1CKHCK2100.1°109.5°
CMCLHCL1110.1°109.5°
CMCLHCL2110.1°109.5°
CLCMCN115.2°109.5°
CLCMHCM1110.1°109.5°
CLCMHCM2110.1°109.5°
HCL1CLHCL2100.2°109.4°
CNCMHCM1110.1°109.4°
CNCMHCM2110.1°109.4°
CMCNCO115.2°109.5°
CMCNHCN1110.1°109.5°
CMCNHCN2110.1°109.4°
HCM1CMHCM2100.1°109.5°
COCNHCN1110.2°109.5°
COCNHCN2110.1°109.5°
CNCOCP114.4°109.5°
CNCOHCO1110.4°109.5°
CNCOHCO2110.4°109.5°
HCN1CNHCN2100.1°109.4°
CPCOHCO1110.4°109.4°
CPCOHCO2110.5°109.5°
COCPHCP1114.4°109.5°
COCPHCP2110.4°109.5°
COCPHCP3110.4°109.5°
HCO1COHCO299.9°109.5°
HCP1CPHCP2110.4°109.5°
HCP1CPHCP3110.5°109.4°
HCP2CPHCP399.8°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2HC11125.3°120.0°
O1C1C2HC12125.3°120.0°
O1C1HC11HC12118.3°119.9°
O1C1C2O2145.7°65.0°
O1C1C2C393.5°175.0°
O1C1C2HC225.1°55.0°
C2C1HC11HC12118.2°120.1°
C2C1O1HO1180.0°180.0°
C1C2O2C3122.6°120.0°
C1C2O2HC2118.8°120.0°
C1C2C3HC2118.7°120.0°
C1C2O2HO2180.0°60.0°
C1C2C3O4167.1°175.0°
C1C2C3HC3167.7°55.0°
C1C2C3HC3241.9°65.0°
HC11C1O1HO154.7°60.0°
HC11C1C2O289.0°175.0°
HC11C1C2C331.8°55.0°
HC11C1C2HC2150.4°65.0°
HC12C1O1HO154.8°60.0°
HC12C1C2O220.4°55.0°
HC12C1C2C3141.2°65.0°
HC12C1C2HC2100.2°175.0°
O2C2C3HC2120.5°120.0°
O2C2C3O446.3°65.0°
O2C2C3HC31171.5°175.0°
O2C2C3HC3279.0°55.0°
C3C2O2HO257.4°59.9°
C2C3O4HC31125.3°120.0°
C2C3O4HC32125.2°120.0°
C2C3HC31HC32118.5°120.0°
C2C3O4P5105.1°179.9°
HC2C2O2HO261.2°179.9°
HC2C2C3O474.2°55.0°
HC2C2C3HC3151.0°65.0°
HC2C2C3HC32160.5°175.0°
O4C3HC31HC32118.5°120.0°
C3O4P5O5A68.0°54.9°
C3O4P5O5B61.7°65.0°
C3O4P5O6176.6°175.0°
HC31C3O4P520.2°59.9°
HC32C3O4P5129.7°60.0°
O4P5O5AO5B124.3°119.9°
O4P5O5AO6113.4°120.1°
O4P5O5BO6112.9°120.0°
O4P5O6C7179.2°175.0°
O5AP5O5BO6122.4°120.0°
O5AP5O6C762.8°54.9°
O5BP5O6C765.5°65.0°
P5O6C7C8163.3°180.0°
P5O6C7HC7138.0°59.9°
P5O6C7HC7271.5°60.0°
O6C7C8HC71125.3°120.0°
O6C7C8HC72125.3°120.0°
O6C7HC71HC72116.3°120.0°
O6C7C8O895.1°65.0°
O6C7C8C9137.8°175.0°
O6C7C8HC819.0°54.9°
C8C7HC71HC72116.2°120.0°
C7C8O8C9128.5°120.0°
C7C8O8HC8112.2°120.0°
C7C8C9HC8113.2°120.0°
C7C8O8HO8180.0°60.0°
C7C8C9OQ2121.0°175.0°
C7C8C9HC91113.8°65.0°
C7C8C9HC924.2°55.0°
HC71C7C8O830.2°55.0°
HC71C7C8C996.9°65.0°
HC71C7C8HC8144.3°175.0°
HC72C7C8O8139.7°175.0°
HC72C7C8C912.6°55.0°
HC72C7C8HC8106.2°65.1°
O8C8C9HC8115.5°120.0°
O8C8C9OQ2107.6°65.0°
O8C8C9HC9117.6°55.0°
O8C8C9HC92127.1°175.0°
C9C8O8HO851.5°60.0°
C8C9OQ2HC91125.2°120.0°
C8C9OQ2HC92125.3°119.9°
C8C9HC91HC92117.6°120.0°
C8C9OQ2CA155.4°180.0°
HC8C8O8HO867.8°180.0°
HC8C8C9OQ27.9°54.9°
HC8C8C9HC91133.1°175.0°
HC8C8C9HC92117.4°65.0°
OQ2C9HC91HC92117.6°120.0°
C9OQ2CAOQ173.1°0.0°
C9OQ2CACB113.8°180.0°
HC91C9OQ2CA30.1°60.0°
HC92C9OQ2CA79.4°60.1°
OQ1CAOQ2CB173.1°180.0°
OQ1CACBCC73.3°0.0°
OQ1CACBHCB152.0°120.0°
OQ1CACBHCB2161.4°120.0°
OQ2CACBCC113.2°180.0°
OQ2CACBHCB1121.5°60.0°
OQ2CACBHCB212.0°60.0°
CACBCCHCB1125.3°120.0°
CACBCCHCB2125.3°120.0°
CACBHCB1HCB2115.6°120.1°
CACBCCCD154.2°180.0°
CACBCCHCC128.9°60.0°
CACBCCHCC280.6°60.0°
CCCBHCB1HCB2115.6°120.0°
CBCCCDHCC1125.3°120.0°
CBCCCDHCC2125.2°120.0°
CBCCHCC1HCC2116.1°120.0°
CBCCCDCE109.0°180.0°
CBCCCDHCD116.2°60.0°
CBCCCDHCD2125.7°60.0°
HCB1CBCCCD80.5°60.0°
HCB1CBCCHCC1154.2°180.0°
HCB1CBCCHCC244.7°60.0°
HCB2CBCCCD28.9°59.9°
HCB2CBCCHCC196.4°60.0°
HCB2CBCCHCC2154.1°180.0°
CDCCHCC1HCC2116.1°120.0°
CCCDCEHCD1125.3°120.0°
CCCDCEHCD2125.3°120.1°
CCCDHCD1HCD2116.4°120.1°
CCCDCECF116.2°180.0°
CCCDCEHCE1118.6°60.0°
CCCDCEHCE29.1°60.0°
HCC1CCCDCE125.7°60.0°
HCC1CCCDHCD1109.1°180.0°
HCC1CCCDHCD20.4°60.0°
HCC2CCCDCE16.2°60.0°
HCC2CCCDHCD1141.5°60.0°
HCC2CCCDHCD2109.0°180.0°
CECDHCD1HCD2116.3°120.0°
CDCECFHCE1125.3°120.0°
CDCECFHCE2125.3°120.0°
CDCEHCE1HCE2116.3°120.0°
CDCECFCG161.7°180.0°
CDCECFHCF173.0°60.0°
CDCECFHCF236.5°60.0°
HCD1CDCECF9.1°60.0°
HCD1CDCEHCE1116.2°180.0°
HCD1CDCEHCE2134.4°60.0°
HCD2CDCECF118.5°60.0°
HCD2CDCEHCE16.7°60.1°
HCD2CDCEHCE2116.2°179.9°
CFCEHCE1HCE2116.3°120.0°
CECFCGHCF1125.3°120.0°
CECFCGHCF2125.3°120.0°
CECFHCF1HCF2116.2°120.0°
CECFCGCH158.8°180.0°
CECFCGHCG175.9°59.9°
CECFCGHCG233.5°60.0°
HCE1CECFCG36.5°59.9°
HCE1CECFHCF1161.7°180.0°
HCE1CECFHCF288.8°60.0°
HCE2CECFCG73.0°60.0°
HCE2CECFHCF152.3°60.0°
HCE2CECFHCF2161.8°180.0°
CGCFHCF1HCF2116.2°119.9°
CFCGCHHCG1125.3°120.1°
CFCGCHHCG2125.3°119.9°
CFCGHCG1HCG2116.0°119.9°
CFCGCHCI161.4°180.0°
CFCGCHHCH173.3°60.0°
CFCGCHHCH236.1°60.1°
HCF1CFCGCH33.5°60.0°
HCF1CFCGHCG1158.8°180.0°
HCF1CFCGHCG291.8°60.0°
HCF2CFCGCH76.0°60.0°
HCF2CFCGHCG149.4°60.1°
HCF2CFCGHCG2158.7°NaN°
CHCGHCG1HCG2115.9°120.0°
CGCHCIHCH1125.3°120.0°
CGCHCIHCH2125.2°120.0°
CGCHHCH1HCH2115.9°120.1°
CGCHCICJ120.7°180.0°
CGCHCIHCI1114.0°60.0°
CGCHCIHCI24.6°60.0°
HCG1CGCHCI36.1°60.0°
HCG1CGCHHCH1161.3°179.9°
HCG1CGCHHCH289.2°60.0°
HCG2CGCHCI73.3°60.0°
HCG2CGCHHCH152.0°59.9°
HCG2CGCHHCH2161.5°180.0°
CICHHCH1HCH2116.0°120.0°
CHCICJHCI1125.3°120.0°
CHCICJHCI2125.2°120.0°
CHCIHCI1HCI2116.1°120.0°
CHCICJCK109.0°180.0°
CHCICJHCJ116.3°60.0°
CHCICJHCJ2125.8°59.9°
HCH1CHCICJ4.6°60.1°
HCH1CHCIHCI1120.8°180.0°
HCH1CHCIHCI2129.8°60.0°
HCH2CHCICJ114.1°59.9°
HCH2CHCIHCI111.2°60.0°
HCH2CHCIHCI2120.7°180.0°
CJCIHCI1HCI2116.2°120.1°
CICJCKHCJ1125.2°120.0°
CICJCKHCJ2125.2°120.1°
CICJHCJ1HCJ2115.9°120.0°
CICJCKCL169.0°180.0°
CICJCKHCK143.7°60.0°
CICJCKHCK265.7°60.0°
HCI1CICJCK125.8°60.0°
HCI1CICJHCJ1109.0°180.0°
HCI1CICJHCJ20.6°60.0°
HCI2CICJCK16.3°60.0°
HCI2CICJHCJ1141.5°60.0°
HCI2CICJHCJ2108.9°179.9°
CKCJHCJ1HCJ2115.8°120.0°
CJCKCLHCK1125.3°120.0°
CJCKCLHCK2125.3°120.0°
CJCKHCK1HCK2115.9°120.0°
CJCKCLCM156.6°180.0°
CJCKCLHCL131.4°60.0°
CJCKCLHCL278.1°60.0°
HCJ1CJCKCL65.8°60.0°
HCJ1CJCKHCK1168.9°180.0°
HCJ1CJCKHCK259.5°60.0°
HCJ2CJCKCL43.8°60.0°
HCJ2CJCKHCK181.5°60.0°
HCJ2CJCKHCK2169.1°180.0°
CLCKHCK1HCK2116.0°120.0°
CKCLCMHCL1125.2°120.0°
CKCLCMHCL2125.2°120.0°
CKCLHCL1HCL2115.9°120.0°
CKCLCMCN107.7°180.0°
CKCLCMHCM117.5°60.0°
CKCLCMHCM2127.0°60.1°
HCK1CKCLCM78.1°60.0°
HCK1CKCLHCL1156.7°180.0°
HCK1CKCLHCL247.2°60.0°
HCK2CKCLCM31.4°60.1°
HCK2CKCLHCL193.8°60.0°
HCK2CKCLHCL2156.7°179.9°
CMCLHCL1HCL2116.0°120.0°
CLCMCNHCM1125.2°120.1°
CLCMCNHCM2125.3°120.0°
CLCMHCM1HCM2115.9°120.0°
CLCMCNCO131.6°180.0°
CLCMCNHCN16.3°59.9°
CLCMCNHCN2103.1°60.0°
HCL1CLCMCN127.1°60.0°
HCL1CLCMHCM1107.7°180.0°
HCL1CLCMHCM21.8°60.0°
HCL2CLCMCN17.5°60.0°
HCL2CLCMHCM1142.8°60.0°
HCL2CLCMHCM2107.8°180.0°
CNCMHCM1HCM2115.9°119.9°
CMCNCOHCN1125.3°120.0°
CMCNCOHCN2125.2°120.0°
CMCNHCN1HCN2115.9°120.0°
CMCNCOCP128.7°180.0°
CMCNCOHCO1106.0°60.0°
CMCNCOHCO23.4°60.0°
HCM1CMCNCO103.1°60.0°
HCM1CMCNHCN1131.5°180.0°
HCM1CMCNHCN222.1°60.1°
HCM2CMCNCO6.3°60.0°
HCM2CMCNHCN1119.0°60.0°
HCM2CMCNHCN2131.6°180.0°
COCNHCN1HCN2116.0°120.0°
CNCOCPHCO1125.2°120.0°
CNCOCPHCO2125.3°120.0°
CNCOHCO1HCO2116.2°120.0°
CNCOCPHCP1180.0°60.0°
CNCOCPHCP254.7°180.0°
CNCOCPHCP354.7°60.0°
HCN1CNCOCP3.5°60.0°
HCN1CNCOHCO1128.7°180.0°
HCN1CNCOHCO2121.8°60.0°
HCN2CNCOCP106.0°60.0°
HCN2CNCOHCO119.2°60.0°
HCN2CNCOHCO2128.7°180.0°
CPCOHCO1HCO2116.3°120.0°
COCPHCP1HCP2125.2°120.1°
COCPHCP1HCP3125.3°120.0°
COCPHCP2HCP3116.2°120.0°
HCO1COCPHCP154.8°60.0°
HCO1COCPHCP2179.9°60.0°
HCO1COCPHCP370.5°180.0°
HCO2COCPHCP154.7°180.0°
HCO2COCPHCP270.6°60.0°
HCO2COCPHCP3180.0°60.0°
HCP1CPHCP2HCP3116.3°120.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon