PG9
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.50Å | |
| N | H | sing | 1.01Å | 1.02Å | |
| N | H2 | sing | 1.01Å | 1.02Å | |
| CA | CB | sing | 1.51Å | 1.48Å | |
| CA | C | sing | 1.51Å | 1.51Å | |
| CA | HA | sing | 1.09Å | 1.12Å | |
| CB | CG1 | sing | 1.38Å | 1.40Å | Aromatic |
| CB | CG2 | doub | 1.38Å | 1.39Å | Aromatic |
| CG1 | CD1 | doub | 1.38Å | 1.39Å | Aromatic |
| CG1 | HG1 | sing | 1.08Å | 1.10Å | |
| CD1 | CE | sing | 1.38Å | 1.40Å | Aromatic |
| CD1 | HD1 | sing | 1.08Å | 1.10Å | |
| CE | CD2 | doub | 1.38Å | 1.40Å | Aromatic |
| CE | HE | sing | 1.08Å | 1.10Å | |
| CD2 | CG2 | sing | 1.38Å | 1.39Å | Aromatic |
| CD2 | HD2 | sing | 1.08Å | 1.10Å | |
| CG2 | HG2 | sing | 1.08Å | 1.10Å | |
| C | O | doub | 1.21Å | 1.24Å | |
| C | OXT | sing | 1.34Å | 1.24Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 112.5° | 106.7° |
| CA | N | H2 | 108.6° | 106.7° |
| N | CA | CB | 108.6° | 109.4° |
| N | CA | C | 110.4° | 109.5° |
| N | CA | HA | 110.3° | 109.5° |
| H | N | H2 | 112.5° | 106.7° |
| CB | CA | C | 111.9° | 109.5° |
| CB | CA | HA | 108.7° | 109.5° |
| CA | CB | CG1 | 119.2° | 120.0° |
| CA | CB | CG2 | 120.3° | 120.0° |
| C | CA | HA | 106.9° | 109.5° |
| CA | C | O | 119.7° | 120.0° |
| CA | C | OXT | 121.0° | 120.0° |
| CG1 | CB | CG2 | 120.5° | 120.0° |
| CB | CG1 | CD1 | 119.9° | 120.0° |
| CB | CG1 | HG1 | 120.2° | 120.0° |
| CB | CG2 | CD2 | 119.6° | 120.0° |
| CB | CG2 | HG2 | 120.3° | 120.0° |
| CD1 | CG1 | HG1 | 119.8° | 120.0° |
| CG1 | CD1 | CE | 119.4° | 120.0° |
| CG1 | CD1 | HD1 | 120.2° | 120.0° |
| CE | CD1 | HD1 | 120.3° | 120.0° |
| CD1 | CE | CD2 | 120.5° | 120.0° |
| CD1 | CE | HE | 119.6° | 120.0° |
| CD2 | CE | HE | 119.9° | 120.0° |
| CE | CD2 | CG2 | 120.1° | 120.0° |
| CE | CD2 | HD2 | 120.3° | 120.0° |
| CG2 | CD2 | HD2 | 119.6° | 120.0° |
| CD2 | CG2 | HG2 | 120.1° | 120.0° |
| O | C | OXT | 119.3° | 120.0° |
| C | OXT | HXT | 121.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 123.1° | 113.8° |
| N | CA | CB | C | 122.1° | 120.0° |
| N | CA | CB | HA | 120.1° | 120.0° |
| N | CA | C | HA | 120.0° | 120.0° |
| N | CA | CB | CG1 | 109.3° | 40.3° |
| N | CA | CB | CG2 | 69.9° | 140.0° |
| N | CA | C | O | 138.8° | 20.0° |
| N | CA | C | OXT | 40.7° | 160.0° |
| H | N | CA | CB | 54.7° | 53.8° |
| H | N | CA | C | 68.3° | 173.8° |
| H | N | CA | HA | 173.8° | 66.2° |
| H2 | N | CA | CB | 180.0° | 60.0° |
| H2 | N | CA | C | 56.9° | 60.0° |
| H2 | N | CA | HA | 61.0° | 180.0° |
| CB | CA | C | HA | 118.9° | 120.0° |
| CA | CB | CG1 | CG2 | 179.3° | 179.7° |
| CA | CB | CG1 | CD1 | 179.4° | 179.8° |
| CA | CB | CG1 | HG1 | 0.6° | 0.2° |
| CA | CB | CG2 | CD2 | 179.3° | 180.0° |
| CA | CB | CG2 | HG2 | 0.7° | 0.0° |
| CB | CA | C | O | 100.1° | 100.0° |
| CB | CA | C | OXT | 80.4° | 80.0° |
| C | CA | CB | CG1 | 128.6° | 79.7° |
| C | CA | CB | CG2 | 52.1° | 100.0° |
| CA | C | O | OXT | 179.5° | 180.0° |
| CA | C | OXT | HXT | 180.0° | 180.0° |
| HA | CA | CB | CG1 | 10.8° | 160.3° |
| HA | CA | CB | CG2 | 170.0° | 20.0° |
| HA | CA | C | O | 18.8° | 140.0° |
| HA | CA | C | OXT | 160.7° | 40.0° |
| CB | CG1 | CD1 | HG1 | 180.0° | 179.6° |
| CB | CG1 | CD1 | CE | 0.3° | 0.4° |
| CB | CG1 | CD1 | HD1 | 179.7° | 179.7° |
| CG1 | CB | CG2 | CD2 | 0.1° | 0.3° |
| CG1 | CB | CG2 | HG2 | 179.9° | 179.7° |
| CG2 | CB | CG1 | CD1 | 0.2° | 0.5° |
| CG2 | CB | CG1 | HG1 | 179.8° | 179.9° |
| CB | CG2 | CD2 | CE | 0.1° | 0.0° |
| CB | CG2 | CD2 | HG2 | 180.0° | 180.0° |
| CB | CG2 | CD2 | HD2 | 179.9° | 180.0° |
| CG1 | CD1 | CE | HD1 | 180.0° | 179.9° |
| CG1 | CD1 | CE | CD2 | 0.3° | 0.1° |
| CG1 | CD1 | CE | HE | 179.7° | 179.8° |
| HG1 | CG1 | CD1 | CE | 179.7° | 180.0° |
| HG1 | CG1 | CD1 | HD1 | 0.3° | 0.1° |
| CD1 | CE | CD2 | HE | 180.0° | 180.0° |
| CD1 | CE | CD2 | CG2 | 0.2° | 0.1° |
| CD1 | CE | CD2 | HD2 | 179.8° | 180.0° |
| HD1 | CD1 | CE | CD2 | 179.7° | 180.0° |
| HD1 | CD1 | CE | HE | 0.3° | 0.0° |
| CE | CD2 | CG2 | HD2 | 180.0° | 180.0° |
| CE | CD2 | CG2 | HG2 | 180.0° | 180.0° |
| HE | CE | CD2 | CG2 | 179.8° | 180.0° |
| HE | CE | CD2 | HD2 | 0.2° | 0.0° |
| HD2 | CD2 | CG2 | HG2 | 0.1° | 0.0° |
| O | C | OXT | HXT | 0.5° | 0.0° |
