Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PG0

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5O2sing1.43Å1.42Å
C5H51sing1.09Å1.10Å
C5H52sing1.09Å1.10Å
C5H53sing1.09Å1.10Å
O2C4sing1.43Å1.44Å
C4C3sing1.53Å1.53Å
C4H41sing1.09Å1.10Å
C4H42sing1.09Å1.10Å
C3O1sing1.43Å1.43Å
C3H31sing1.09Å1.10Å
C3H32sing1.09Å1.10Å
O1C2sing1.43Å1.45Å
C2C1sing1.53Å1.54Å
C2H21sing1.09Å1.10Å
C2H22sing1.09Å1.10Å
C1OTTsing1.43Å1.42Å
C1H11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
OTTHTTsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C5H51109.4°109.5°
O2C5H52109.5°109.5°
O2C5H53109.5°109.5°
C5O2C4115.9°106.8°
H51C5H52109.5°109.4°
H51C5H53109.5°109.4°
H52C5H53109.5°109.5°
O2C4C3108.0°109.5°
O2C4H41110.3°109.5°
O2C4H42110.0°109.5°
C3C4H41110.3°109.4°
C3C4H42109.9°109.5°
C4C3O1117.4°109.4°
C4C3H31105.1°109.5°
C4C3H32106.9°109.4°
H41C4H42108.4°109.5°
O1C3H31105.1°109.5°
O1C3H32106.9°109.5°
C3O1C2112.3°106.8°
H31C3H32115.9°109.5°
O1C2C1111.2°109.5°
O1C2H21108.5°109.5°
O1C2H22108.9°109.5°
C1C2H21108.5°109.5°
C1C2H22108.9°109.5°
C2C1OTT113.7°109.5°
C2C1H11107.1°109.5°
C2C1H12108.1°109.5°
H21C2H22110.8°109.5°
OTTC1H11107.1°109.5°
OTTC1H12108.1°109.5°
C1OTTHTT109.5°106.8°
H11C1H12112.8°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C5H51H52120.0°120.0°
O2C5H51H53120.0°120.1°
O2C5H52H53120.0°120.1°
C5O2C4C3113.3°180.0°
C5O2C4H417.3°60.0°
C5O2C4H42126.7°60.0°
H51C5H52H53120.1°119.9°
H51C5O2C475.5°60.0°
H52C5O2C444.5°60.0°
H53C5O2C4164.5°180.0°
O2C4C3H41120.6°120.0°
O2C4C3H42120.0°120.0°
O2C4H41H42120.4°120.0°
O2C4C3O1144.3°65.0°
O2C4C3H3128.0°175.0°
O2C4C3H3295.7°54.9°
C3C4H41H42120.4°120.0°
C4C3O1H31116.3°120.0°
C4C3O1H32120.0°119.9°
C4C3H31H32117.7°120.0°
C4C3O1C2170.3°180.0°
H41C4C3O195.1°55.0°
H41C4C3H31148.5°65.0°
H41C4C3H3224.9°174.9°
H42C4C3O124.3°175.0°
H42C4C3H3192.0°55.0°
H42C4C3H32144.3°65.1°
O1C3H31H32117.8°120.0°
C3O1C2C163.2°180.0°
C3O1C2H21177.6°60.0°
C3O1C2H2256.8°60.0°
H31C3O1C254.0°60.0°
H32C3O1C269.7°60.0°
O1C2C1H21119.2°120.0°
O1C2C1H22120.0°120.0°
O1C2H21H22119.5°120.0°
O1C2C1OTT170.4°65.0°
O1C2C1H1152.3°175.0°
O1C2C1H1269.5°55.0°
C1C2H21H22119.5°120.0°
C2C1OTTH11118.1°120.0°
C2C1OTTH12120.0°120.0°
C2C1H11H12118.8°120.0°
C2C1OTTHTT118.0°180.0°
H21C2C1OTT70.3°55.0°
H21C2C1H11171.6°65.0°
H21C2C1H1249.7°174.9°
H22C2C1OTT50.4°175.0°
H22C2C1H1167.7°55.0°
H22C2C1H12170.4°65.0°
OTTC1H11H12118.9°120.0°
H11C1OTTHTT123.9°60.0°
H12C1OTTHTT2.0°60.0°

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon