Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | O1 | doub | 1.21Å | 1.27Å | |
C1 | O2' | sing | 1.34Å | 1.28Å | |
C1 | C2 | sing | 1.51Å | 1.58Å | |
O2' | HO2 | sing | 0.97Å | 0.95Å | |
C2 | C3 | sing | 1.53Å | 1.59Å | |
C2 | O2 | sing | 1.43Å | 1.45Å | |
C2 | H2 | sing | 1.09Å | 1.11Å | |
C3 | O3 | sing | 1.43Å | 1.47Å | |
C3 | H31 | sing | 1.09Å | 1.12Å | |
C3 | H32 | sing | 1.09Å | 1.11Å | |
O2 | P | sing | 1.61Å | 1.68Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
P | O1P | doub | 1.48Å | 1.57Å | |
P | O2P | sing | 1.61Å | 1.49Å | |
P | O3P | sing | 1.61Å | 1.56Å | |
O2P | HOP2 | sing | 0.97Å | 0.95Å | |
O3P | HOP3 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | C1 | O2' | 122.4° | 120.0° |
O1 | C1 | C2 | 118.1° | 120.0° |
O2' | C1 | C2 | 118.1° | 120.0° |
C1 | O2' | HO2 | 122.3° | 120.0° |
C1 | C2 | C3 | 110.6° | 109.4° |
C1 | C2 | O2 | 112.2° | 109.5° |
C1 | C2 | H2 | 107.5° | 109.4° |
C3 | C2 | O2 | 111.1° | 109.5° |
C3 | C2 | H2 | 108.5° | 109.5° |
C2 | C3 | O3 | 115.4° | 109.4° |
C2 | C3 | H31 | 110.0° | 109.5° |
C2 | C3 | H32 | 110.1° | 109.5° |
O2 | C2 | H2 | 106.8° | 109.5° |
C2 | O2 | P | 119.3° | 106.8° |
O3 | C3 | H31 | 110.0° | 109.5° |
O3 | C3 | H32 | 110.0° | 109.5° |
C3 | O3 | HO3 | 115.4° | 106.7° |
H31 | C3 | H32 | 100.2° | 109.4° |
O2 | P | O1P | 108.9° | 109.4° |
O2 | P | O2P | 102.2° | 109.5° |
O2 | P | O3P | 109.7° | 109.5° |
O1P | P | O2P | 111.0° | 109.4° |
O1P | P | O3P | 110.8° | 109.5° |
O2P | P | O3P | 114.0° | 109.4° |
P | O2P | HOP2 | 102.2° | 106.8° |
P | O3P | HOP3 | 109.6° | 106.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | C1 | O2' | C2 | 166.2° | 180.0° |
O1 | C1 | O2' | HO2 | 180.0° | 0.0° |
O1 | C1 | C2 | C3 | 162.0° | 120.0° |
O1 | C1 | C2 | O2 | 37.4° | 0.0° |
O1 | C1 | C2 | H2 | 79.7° | 120.0° |
O2' | C1 | C2 | C3 | 31.2° | 60.0° |
O2' | C1 | C2 | O2 | 155.8° | 179.9° |
O2' | C1 | C2 | H2 | 87.1° | 60.0° |
C2 | C1 | O2' | HO2 | 13.8° | 180.0° |
C1 | C2 | C3 | O2 | 125.2° | 120.0° |
C1 | C2 | C3 | H2 | 117.6° | 120.0° |
C1 | C2 | O2 | H2 | 117.5° | 120.0° |
C1 | C2 | C3 | O3 | 58.2° | 180.0° |
C1 | C2 | C3 | H31 | 176.5° | 60.0° |
C1 | C2 | C3 | H32 | 67.1° | 60.0° |
C1 | C2 | O2 | P | 118.2° | 120.0° |
C3 | C2 | O2 | H2 | 118.2° | 120.0° |
C2 | C3 | O3 | H31 | 125.2° | 120.0° |
C2 | C3 | O3 | H32 | 125.3° | 120.1° |
C2 | C3 | H31 | H32 | 115.9° | 120.1° |
C3 | C2 | O2 | P | 117.5° | 120.1° |
C2 | C3 | O3 | HO3 | 180.0° | 180.0° |
O2 | C2 | C3 | O3 | 67.0° | 60.0° |
O2 | C2 | C3 | H31 | 58.2° | 60.0° |
O2 | C2 | C3 | H32 | 167.7° | 180.0° |
C2 | O2 | P | O1P | 177.0° | 60.1° |
C2 | O2 | P | O2P | 59.6° | 180.0° |
C2 | O2 | P | O3P | 61.6° | 60.0° |
H2 | C2 | C3 | O3 | 175.9° | 60.0° |
H2 | C2 | C3 | H31 | 58.9° | 180.0° |
H2 | C2 | C3 | H32 | 50.6° | 60.0° |
H2 | C2 | O2 | P | 0.7° | 0.0° |
O3 | C3 | H31 | H32 | 115.9° | 120.0° |
H31 | C3 | O3 | HO3 | 54.7° | 60.0° |
H32 | C3 | O3 | HO3 | 54.7° | 59.9° |
O2 | P | O1P | O2P | 111.7° | 120.0° |
O2 | P | O1P | O3P | 120.7° | 120.0° |
O2 | P | O2P | O3P | 118.2° | 120.1° |
O2 | P | O2P | HOP2 | 180.0° | 179.9° |
O2 | P | O3P | HOP3 | 180.0° | 60.0° |
O1P | P | O2P | O3P | 125.9° | 120.0° |
O1P | P | O2P | HOP2 | 64.0° | 60.0° |
O1P | P | O3P | HOP3 | 59.8° | 179.9° |
O2P | P | O3P | HOP3 | 66.2° | 60.1° |
O3P | P | O2P | HOP2 | 61.9° | 60.0° |