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SummaryGeometryRelated PDB entries

P99

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C02N01sing1.35Å1.46Å
N01HN01sing0.97Å1.00Å
N01HN0Asing0.97Å1.00Å
O03C02doub1.21Å1.19Å
C02C04sing1.51Å1.54Å
O05C04sing1.43Å1.41Å
C04H04sing1.09Å1.10Å
C04H04Asing1.09Å1.10Å
O05C06sing1.36Å1.41Å
C07C06doub1.39Å1.54ÅAromatic
C06C25sing1.39Å1.55ÅAromatic
F08C07sing1.35Å1.36Å
C07C09sing1.38Å1.54ÅAromatic
C09C10doub1.39Å1.54ÅAromatic
C09H09sing1.08Å1.08Å
C10S11sing1.76Å1.80Å
C10C24sing1.39Å1.53ÅAromatic
S11C12sing1.81Å1.82Å
C12C13sing1.53Å1.54Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
N14C13sing1.47Å1.47Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
N14S15sing1.66Å1.72Å
N14HN14sing0.97Å1.00Å
O16S15doub1.42Å1.65Å
S15O17doub1.42Å1.65Å
S15C18sing1.76Å1.80Å
C23C18doub1.38Å1.53ÅAromatic
C18C19sing1.38Å1.52ÅAromatic
C19C20doub1.38Å1.52ÅAromatic
C19H19sing1.08Å1.08Å
C21C20sing1.38Å1.54ÅAromatic
C20H20sing1.08Å1.08Å
C22C21doub1.38Å1.53ÅAromatic
C21H21sing1.08Å1.08Å
C23C22sing1.38Å1.53ÅAromatic
C22H22sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C25C24doub1.38Å1.53ÅAromatic
C24H24sing1.08Å1.08Å
C25F26sing1.35Å1.35Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C02N01HN01120.0°120.0°
C02N01HN0A120.0°120.0°
N01C02O03119.1°120.0°
N01C02C04120.3°120.0°
HN01N01HN0A120.0°120.0°
O03C02C04120.6°120.0°
C02C04O05110.5°109.4°
C02C04H04109.1°109.5°
C02C04H04A109.1°109.5°
O05C04H04109.1°109.5°
O05C04H04A109.1°109.5°
C04O05C06122.7°117.0°
H04C04H04A109.8°109.5°
O05C06C07118.5°120.0°
O05C06C25121.7°120.0°
C07C06C25119.8°120.0°
C06C07F08119.6°120.0°
C06C07C09120.1°120.0°
C06C25C24120.3°120.0°
C06C25F26121.7°120.0°
F08C07C09120.3°120.0°
C07C09C10119.1°120.0°
C07C09H09120.5°120.0°
C10C09H09120.5°120.0°
C09C10S11120.5°120.0°
C09C10C24121.5°119.9°
S11C10C24118.0°120.0°
C10S11C12107.2°103.0°
C10C24C25119.2°120.0°
C10C24H24120.4°120.0°
S11C12C13109.7°109.5°
S11C12H12109.4°109.5°
S11C12H12A109.4°109.5°
C13C12H12109.4°109.4°
C13C12H12A109.4°109.5°
C12C13N14110.1°109.4°
C12C13H13109.3°109.4°
C12C13H13A109.2°109.5°
H12C12H12A109.5°109.5°
N14C13H13109.2°109.5°
N14C13H13A109.3°109.5°
C13N14S15109.1°120.0°
C13N14HN14109.6°120.0°
H13C13H13A109.7°109.5°
S15N14HN14109.6°120.0°
N14S15O16111.8°106.4°
N14S15O17108.1°106.4°
N14S15C18109.0°107.2°
O16S15O17111.1°123.2°
O16S15C18110.4°106.4°
O17S15C18106.4°106.4°
S15C18C23118.8°120.0°
S15C18C19119.0°119.9°
C23C18C19122.2°120.1°
C18C23C22119.5°120.0°
C18C23H23120.3°120.0°
C18C19C20118.3°119.9°
C18C19H19120.8°120.0°
C20C19H19120.8°120.0°
C19C20C21120.0°120.0°
C19C20H20120.0°120.0°
C21C20H20120.0°120.0°
C20C21C22121.1°120.0°
C20C21H21119.5°120.0°
C22C21H21119.4°120.0°
C21C22C23118.9°120.0°
C21C22H22120.5°120.0°
C23C22H22120.5°120.0°
C22C23H23120.3°120.0°
C25C24H24120.4°120.0°
C24C25F26118.1°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C02N01HN01HN0A180.0°179.8°
N01C02O03C04178.5°180.0°
N01C02C04O05137.3°180.0°
N01C02C04H04102.7°60.0°
N01C02C04H04A17.3°60.0°
HN01N01C02O030.0°180.0°
HN01N01C02C04178.5°0.0°
HN0AN01C02O03180.0°0.3°
HN0AN01C02C041.5°179.7°
O03C02C04O0544.2°0.0°
O03C02C04H0475.8°120.0°
O03C02C04H04A164.2°120.0°
C02C04O05H04120.0°120.0°
C02C04O05H04A120.0°120.0°
C02C04H04H04A119.6°120.0°
C02C04O05C06154.9°180.0°
O05C04H04H04A119.6°120.0°
C04O05C06C07117.6°89.7°
C04O05C06C2561.6°90.0°
H04C04O05C0634.9°60.0°
H04AC04O05C0685.1°60.0°
O05C06C07C25179.3°179.7°
O05C06C07F082.3°0.1°
O05C06C07C09177.8°180.0°
O05C06C25C24177.7°179.8°
O05C06C25F260.1°0.0°
C06C07F08C09179.9°179.9°
C06C07C09C100.8°0.1°
C06C07C09H09179.2°180.0°
C07C06C25C241.5°0.5°
C07C06C25F26179.3°179.7°
C25C06C07F08178.5°179.8°
C25C06C07C091.5°0.3°
C06C25C24C100.8°0.5°
C06C25C24F26177.9°179.8°
C06C25C24H24179.2°179.7°
F08C07C09C10179.2°180.0°
F08C07C09H090.8°0.1°
C07C09C10H09180.0°179.9°
C07C09C10S11179.2°179.9°
C07C09C10C240.0°0.0°
C09C10S11C24179.2°179.9°
C09C10S11C12170.9°180.0°
C09C10C24C250.1°0.2°
C09C10C24H24179.9°179.9°
H09C09C10S110.7°0.0°
H09C09C10C24179.9°180.0°
C10S11C12C1398.8°180.0°
C10S11C12H12141.2°60.1°
C10S11C12H12A21.2°60.0°
S11C10C24C25179.3°179.7°
S11C10C24H240.7°0.1°
C24C10S11C129.9°0.1°
C10C24C25H24180.0°179.8°
C10C24C25F26178.7°179.7°
S11C12C13H12120.0°120.0°
S11C12C13H12A120.0°120.1°
S11C12H12H12A119.9°120.1°
S11C12C13N1446.3°180.0°
S11C12C13H1373.7°60.1°
S11C12C13H13A166.4°60.0°
C13C12H12H12A119.9°120.0°
C12C13N14H13120.0°119.9°
C12C13N14H13A120.0°120.0°
C12C13H13H13A119.7°120.0°
C12C13N14S15116.6°165.0°
C12C13N14HN143.5°15.0°
H12C12C13N14166.3°60.0°
H12C12C13H1346.3°180.0°
H12C12C13H13A73.7°60.0°
H12AC12C13N1473.7°60.0°
H12AC12C13H13166.3°60.0°
H12AC12C13H13A46.4°180.0°
N14C13H13H13A119.7°120.1°
C13N14S15HN14120.0°180.0°
C13N14S15O16175.4°178.5°
C13N14S15O1762.0°48.6°
C13N14S15C1853.1°65.0°
H13C13N14S15123.4°45.0°
H13C13N14HN14116.6°135.0°
H13AC13N14S153.4°75.0°
H13AC13N14HN14123.5°105.0°
N14S15O16O17120.8°122.9°
N14S15O16C18121.4°114.1°
N14S15O17C18116.9°114.1°
N14S15C18C2358.9°90.3°
N14S15C18C19118.5°90.0°
HN14N14S15O1664.6°1.5°
HN14N14S15O1758.0°131.5°
HN14N14S15C18173.2°115.0°
O16S15O17C18120.2°123.0°
O16S15C18C2364.1°156.2°
O16S15C18C19118.4°23.5°
O17S15C18C23175.2°23.3°
O17S15C18C192.2°156.5°
S15C18C23C19177.4°179.7°
S15C18C19C20176.9°180.0°
S15C18C19H193.1°0.0°
S15C18C23C22177.4°179.7°
S15C18C23H232.6°0.0°
C23C18C19C200.4°0.3°
C23C18C19H19179.6°179.7°
C18C23C22C210.1°0.5°
C18C23C22H23180.0°179.7°
C18C23C22H22179.9°179.7°
C18C19C20H19180.0°180.0°
C18C19C20C210.9°0.0°
C18C19C20H20179.1°180.0°
C19C18C23C220.1°0.5°
C19C18C23H23179.9°179.8°
C19C20C21H20180.0°180.0°
C19C20C21C220.9°0.1°
C19C20C21H21179.1°180.0°
H19C19C20C21179.1°180.0°
H19C19C20H200.9°0.0°
C20C21C22H21180.0°179.9°
C20C21C22C230.4°0.2°
C20C21C22H22179.6°180.0°
H20C20C21C22179.1°180.0°
H20C20C21H210.9°0.0°
C21C22C23H22180.0°179.8°
C21C22C23H23179.9°179.8°
H21C21C22C23179.6°179.7°
H21C21C22H220.4°0.1°
H22C22C23H230.1°0.0°
H24C24C25F261.3°0.1°

246704

PDB entries from 2025-12-24

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