Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

P6U

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.54Å
C2C3sing1.53Å1.55Å
C2N1sing1.45Å1.48Å
C2C6sing1.51Å1.51Å
C3C4sing1.54Å1.51Å
C4S1sing1.81Å1.82Å
S1C5sing1.76Å1.79Å
C5N1doub1.28Å1.30Å
C5N2sing1.38Å1.38Å
C6C7doub1.38Å1.40ÅAromatic
C6C11sing1.39Å1.40ÅAromatic
C7C8sing1.38Å1.39ÅAromatic
C8C9doub1.38Å1.40ÅAromatic
C8C12sing1.51Å1.50Å
C9C10sing1.39Å1.39ÅAromatic
C9F2sing1.35Å1.33Å
C10C11doub1.38Å1.40ÅAromatic
C11F1sing1.35Å1.33Å
C12N3sing1.47Å1.48Å
N3C13sing1.47Å1.43Å
C13C14sing1.53Å1.52Å
C13C15sing1.53Å1.52Å
C13C16sing1.53Å1.55Å
C14C15sing1.53Å1.51Å
C16F3sing1.40Å1.34Å
C16F4sing1.40Å1.34Å
C16F5sing1.40Å1.34Å
C1H1sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C4H7sing1.09Å1.10Å
C4H6sing1.09Å1.10Å
N2H9sing0.97Å1.00Å
N2H8sing0.97Å1.00Å
C7H10sing1.08Å1.08Å
C10H11sing1.08Å1.08Å
C12H13sing1.09Å1.10Å
C12H12sing1.09Å1.10Å
N3H14sing1.01Å1.00Å
C14H15sing1.09Å1.10Å
C14H16sing1.09Å1.10Å
C15H17sing1.09Å1.10Å
C15H18sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2C3109.8°108.8°
C1C2N1103.1°108.8°
C1C2C6110.8°108.9°
C2C1H1109.5°109.5°
C2C1H3109.4°109.5°
C2C1H2109.5°109.5°
C3C2N1112.5°112.7°
C3C2C6109.7°108.9°
C2C3C4111.2°109.0°
C2C3H5109.0°109.5°
C2C3H4109.0°109.5°
N1C2C6110.8°108.8°
C2N1C5122.2°128.6°
C2C6C7121.2°120.0°
C2C6C11121.7°119.9°
C3C4S1111.3°107.9°
C4C3H5109.0°109.6°
C4C3H4109.1°109.6°
C3C4H7109.0°109.8°
C3C4H6109.0°109.7°
C4S1C599.8°99.7°
S1C4H7109.0°109.8°
S1C4H6109.0°109.8°
S1C5N1129.1°124.0°
S1C5N2111.1°118.0°
N1C5N2119.8°118.0°
C5N2H9120.0°120.0°
C5N2H8120.0°120.0°
C7C6C11117.1°120.0°
C6C7C8122.1°120.0°
C6C7H10119.0°120.0°
C6C11C10122.6°119.9°
C6C11F1121.1°120.0°
C7C8C9119.0°120.1°
C7C8C12120.5°119.9°
C8C7H10119.0°120.0°
C9C8C12120.5°120.0°
C8C9C10121.3°119.9°
C8C9F2119.9°120.0°
C8C12N3106.9°109.5°
C8C12H13110.1°109.4°
C8C12H12110.1°109.5°
C10C9F2118.9°120.0°
C9C10C11118.0°120.0°
C9C10H11121.0°120.0°
C10C11F1116.3°120.1°
C11C10H11121.0°120.0°
C12N3C13114.9°111.0°
N3C12H13110.1°109.4°
N3C12H12110.1°109.5°
C12N3H14108.1°111.0°
N3C13C14118.3°117.5°
N3C13C15118.6°117.5°
N3C13C16115.6°115.5°
C13N3H14108.1°110.9°
C14C13C1559.5°60.0°
C14C13C16116.8°117.5°
C13C14C1560.3°60.0°
C13C14H15120.0°117.5°
C13C14H16120.0°117.5°
C15C13C16116.6°117.5°
C13C15C1460.3°60.0°
C13C15H17119.9°117.5°
C13C15H18120.0°117.5°
C13C16F3115.3°109.5°
C13C16F4112.9°109.5°
C13C16F5112.9°109.4°
C15C14H15120.0°117.5°
C15C14H16120.0°117.5°
C14C15H17120.0°117.5°
C14C15H18120.0°117.4°
F3C16F4104.7°109.5°
F3C16F5104.7°109.5°
F4C16F5105.3°109.5°
H1C1H3109.5°109.4°
H1C1H2109.4°109.4°
H3C1H2109.5°109.5°
H5C3H4109.5°109.6°
H7C4H6109.4°109.8°
H9N2H8120.0°120.0°
H13C12H12109.4°109.4°
H15C14H16109.4°115.6°
H17C15H18109.4°115.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2C3N1114.3°120.8°
C1C2C3C6122.0°118.5°
C1C2N1C6118.6°118.5°
C1C2C3C4177.1°64.9°
C1C2N1C5147.8°101.0°
C1C2C6C7124.3°120.0°
C1C2C6C1155.2°59.7°
C2C1H1H3120.0°120.0°
C2C1H1H2120.0°120.1°
C2C1H3H2120.0°120.1°
C1C2C3H562.6°175.2°
C1C2C3H456.8°54.9°
C3C2N1C6123.1°120.8°
C2C3C4H5120.3°119.8°
C2C3C4H4120.3°119.9°
C2C3C4S164.8°71.0°
C3C2N1C529.6°19.7°
C3C2C6C7114.3°121.5°
C3C2C6C1166.2°58.8°
C3C2C1H1180.0°60.0°
C3C2C1H360.0°180.0°
C3C2C1H260.0°60.0°
C2C3H5H4119.2°120.2°
C2C3C4H755.5°48.6°
C2C3C4H6174.9°169.4°
N1C2C3C462.8°55.8°
C2N1C5S12.1°1.4°
C2N1C5N2177.6°178.5°
N1C2C6C710.5°1.6°
N1C2C6C11169.0°178.1°
N1C2C1H159.9°176.9°
N1C2C1H360.1°56.9°
N1C2C1H2179.9°63.1°
N1C2C3H5176.9°64.0°
N1C2C3H457.4°175.7°
C6C2C3C460.9°176.6°
C6C2N1C593.6°140.5°
C2C6C7C11179.5°179.7°
C2C6C7C8178.7°180.0°
C2C6C11C10177.9°179.7°
C2C6C11F12.6°0.1°
C6C2C1H158.7°58.5°
C6C2C1H3178.7°61.5°
C6C2C1H261.3°178.5°
C6C2C3H559.3°56.7°
C6C2C3H4178.8°63.6°
C2C6C7H101.3°0.1°
C3C4S1H7120.3°119.6°
C3C4S1H6120.3°119.5°
C3C4S1C533.7°47.3°
C4C3H5H4119.2°120.3°
C3C4H7H6119.1°120.7°
C4S1C5N13.6°14.9°
C4S1C5N2176.1°165.0°
S1C4C3H5175.0°48.8°
S1C4C3H455.5°169.1°
S1C4H7H6119.2°120.9°
S1C5N1N2179.7°179.9°
C5S1C4H786.6°72.3°
C5S1C4H6154.0°166.8°
S1C5N2H90.0°0.0°
S1C5N2H8180.0°180.0°
N1C5N2H9179.7°180.0°
N1C5N2H80.3°0.0°
C5N2H9H8180.0°180.0°
C6C7C8H10180.0°179.9°
C6C7C8C90.8°0.1°
C6C7C8C12178.2°180.0°
C7C6C11C101.6°0.6°
C7C6C11F1177.9°179.7°
C11C6C7C80.8°0.3°
C6C11C10C90.8°0.5°
C6C11C10F1179.6°179.7°
C11C6C7H10179.2°179.8°
C6C11C10H11179.2°179.8°
C7C8C9C12179.0°180.0°
C7C8C9C101.7°0.0°
C7C8C9F2177.9°180.0°
C7C8C12N397.5°105.0°
C7C8C12H1322.1°135.1°
C7C8C12H12142.9°15.1°
C8C9C10F2179.6°180.0°
C8C9C10C110.9°0.3°
C9C8C12N381.5°74.9°
C9C8C7H10179.2°180.0°
C8C9C10H11179.1°180.0°
C9C8C12H13158.9°45.0°
C9C8C12H1238.1°164.9°
C12C8C9C10177.3°180.0°
C12C8C9F23.1°0.0°
C8C12N3H13119.6°119.9°
C8C12N3H12119.6°120.1°
C8C12N3C13157.5°174.8°
C12C8C7H101.8°0.1°
C8C12H13H12121.2°120.0°
C8C12N3H1436.7°61.3°
C9C10C11H11180.0°179.7°
C9C10C11F1178.8°179.8°
F2C9C10C11178.6°179.7°
F2C9C10H111.4°0.1°
F1C11C10H111.2°0.1°
C12N3C13H14120.8°123.9°
C12N3C13C1475.6°58.3°
C12N3C13C15144.3°127.0°
C12N3C13C1670.1°87.3°
N3C12H13H12121.2°120.0°
N3C13C14C15108.2°107.5°
N3C13C14C16145.3°144.9°
N3C13C15C16145.3°145.1°
N3C13C16F3178.9°65.1°
N3C13C16F460.8°174.8°
N3C13C16F558.6°54.9°
C13N3C12H1382.9°54.9°
C13N3C12H1237.8°65.1°
N3C13C14H15142.2°145.0°
N3C13C14H161.3°0.1°
N3C13C15H171.8°0.0°
N3C13C15H18142.7°145.1°
C14C13C15C16106.9°107.4°
C13C14C15H15109.6°107.5°
C13C14C15H16109.6°107.5°
C14C13C16F332.7°80.5°
C14C13C16F4153.0°39.6°
C14C13C16F587.6°159.5°
C14C13N3H1445.1°65.6°
C13C14H15H16144.6°145.7°
C14C13C15H17109.6°107.5°
C14C13C15H18109.5°107.4°
C15C13C16F334.8°149.1°
C15C13C16F485.5°29.1°
C15C13C16F5155.1°90.9°
C15C13N3H1423.5°3.0°
C13C15H17H18144.6°145.8°
C13C16F3F4124.7°120.0°
C13C16F3F5124.7°120.0°
C13C16F4F5123.7°119.9°
C16C13N3H14169.1°148.8°
C16C13C14H153.1°0.1°
C16C13C14H16144.0°145.0°
C16C13C15H17143.6°145.1°
C16C13C15H182.7°0.0°
C15C14H15H16144.6°145.6°
C14C15H17H18144.6°145.6°
F3C16F4F5110.1°120.0°
H1C1H3H2120.0°120.0°
H5C3C4H764.8°168.4°
H5C3C4H654.6°70.8°
H4C3C4H7175.8°71.2°
H4C3C4H664.8°49.5°
H13C12N3H14156.3°178.8°
H12C12N3H1483.0°58.8°
H15C14C15H17140.9°145.0°
H15C14C15H180.0°0.0°
H16C14C15H170.0°0.0°
H16C14C15H18140.9°145.0°

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon