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P6B

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.55Å1.53Å
C1C13sing1.55Å1.52Å
N1C2sing1.49Å1.47Å
N1C3sing1.47Å1.47Å
N1C12sing1.48Å1.47Å
O1N3sing1.21Å1.42ÅAromatic
O1C4sing1.34Å1.34ÅAromatic
N2C4doub1.31Å1.29ÅAromatic
N2C5sing1.35Å1.37ÅAromatic
O2C13sing1.43Å1.42Å
C3C4sing1.51Å1.49Å
N3C5doub1.31Å1.30ÅAromatic
C5C6sing1.48Å1.47Å
C6C7doub1.39Å1.39ÅAromatic
C6C11sing1.39Å1.39ÅAromatic
C7C8sing1.38Å1.38ÅAromatic
C8C9doub1.38Å1.38ÅAromatic
C9C10sing1.38Å1.38ÅAromatic
C10C11doub1.38Å1.38ÅAromatic
C12C13sing1.54Å1.53Å
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2H2Asing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C11H11sing1.08Å1.08Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C13H13sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C13103.6°102.9°
C1C2N1104.1°103.2°
C2C1H1110.9°110.7°
C2C1H1A110.9°110.7°
C1C2H2110.8°110.7°
C1C2H2A110.8°110.6°
C1C13O2110.6°110.3°
C1C13C1293.6°105.2°
C13C1H1110.9°110.7°
C13C1H1A110.9°110.7°
C1C13H13112.6°110.3°
C2N1C3114.2°111.0°
C2N1C12104.1°105.8°
N1C2H2110.8°110.7°
N1C2H2A110.8°110.6°
C3N1C12115.5°111.0°
N1C3C4110.7°109.5°
N1C3H3109.2°109.5°
N1C3H3A109.1°109.5°
N1C12C13101.9°107.0°
N1C12H12111.3°109.9°
N1C12H12A111.3°109.9°
N3O1C4106.7°110.0°
O1N3C5102.8°110.1°
O1C4N2112.2°107.1°
O1C4C3120.3°126.4°
C4N2C5103.9°105.6°
N2C4C3127.5°126.5°
N2C5N3114.3°107.1°
N2C5C6123.7°126.4°
O2C13C12111.5°110.3°
C13O2HO2109.5°114.0°
O2C13H13114.3°110.2°
C4C3H3109.1°109.4°
C4C3H3A109.2°109.5°
N3C5C6122.0°126.4°
C5C6C7120.4°120.1°
C5C6C11120.4°120.1°
C7C6C11119.3°119.7°
C6C7C8120.3°119.9°
C6C7H7119.9°120.1°
C6C11C10120.2°119.9°
C6C11H11119.9°120.1°
C7C8C9120.1°120.1°
C8C7H7119.8°120.1°
C7C8H8120.0°119.9°
C8C9C10120.0°120.2°
C9C8H8120.0°120.0°
C8C9H9120.0°119.8°
C9C10C11120.2°120.1°
C10C9H9120.0°119.9°
C9C10H10119.9°119.9°
C11C10H10119.9°120.0°
C10C11H11119.9°120.0°
C13C12H12111.3°109.9°
C13C12H12A111.3°109.9°
C12C13H13112.5°110.4°
H1C1H1A109.5°110.8°
H2C2H2A109.5°110.8°
H3C3H3A109.5°109.4°
H12C12H12A109.5°110.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C13H1119.0°118.4°
C2C1C13H1A119.0°118.3°
C1C2N1H2119.1°118.5°
C1C2N1H2A119.1°118.4°
C1C2N1C3137.5°159.7°
C1C2N1C1210.7°39.3°
C2C1C13O266.6°140.9°
C2C1C13C1248.0°22.0°
C2C1H1H1A122.7°123.2°
C1C2H2H2A122.5°123.1°
C2C1C13H13164.1°97.1°
C13C1C2N125.0°37.5°
C1C13C12N155.3°1.2°
C1C13O2C12102.7°115.7°
C1C13O2H13128.4°122.1°
C1C13C12H13116.3°119.0°
C13C1H1H1A122.7°123.3°
C13C1C2H2144.1°81.0°
C13C1C2H2A94.2°155.8°
C1C13O2HO2180.0°61.4°
C1C13C12H1263.4°118.1°
C1C13C12H12A174.1°120.6°
C2N1C3C12120.7°117.4°
C2N1C3C453.6°69.9°
C2N1C12C1342.5°25.4°
N1C2C1H1144.0°80.9°
N1C2C1H1A94.1°155.8°
N1C2H2H2A122.5°123.1°
C2N1C3H3173.8°170.1°
C2N1C3H3A66.6°50.1°
C2N1C12H1276.3°94.0°
C2N1C12H12A161.3°144.7°
N1C3C4O128.5°90.0°
N1C3C4N2150.8°90.0°
N1C3C4H3120.2°120.0°
N1C3C4H3A120.2°120.1°
C3N1C12C13168.6°145.8°
C3N1C2H218.4°41.3°
C3N1C2H2A103.3°81.9°
N1C3H3H3A119.4°120.1°
C3N1C12H1249.8°26.5°
C3N1C12H12A72.7°94.8°
N1C12C13O258.5°117.7°
C12N1C3C4174.3°172.7°
N1C12C13H12118.7°119.3°
N1C12C13H12A118.8°119.4°
C12N1C2H2108.5°79.2°
C12N1C2H2A129.8°157.6°
C12N1C3H365.5°52.8°
C12N1C3H3A54.1°67.2°
N1C12H12H12A123.6°121.2°
N1C12C13H13171.6°120.2°
N3O1C4N20.4°0.0°
O1N3C5N20.9°0.0°
N3O1C4C3179.0°180.0°
O1N3C5C6179.3°180.0°
O1C4N2C3179.3°180.0°
O1C4N2C50.1°0.0°
C4O1N3C50.7°0.0°
O1C4C3H391.7°150.0°
O1C4C3H3A148.7°30.0°
C4N2C5N30.7°0.0°
C4N2C5C6179.1°180.0°
N2C4C3H389.0°30.0°
N2C4C3H3A30.6°149.9°
C5N2C4C3179.5°180.0°
N2C5N3C6178.4°180.0°
N2C5C6C7170.4°180.0°
N2C5C6C118.4°0.3°
O2C13C12H13129.9°122.1°
O2C13C1H152.5°22.5°
O2C13C1H1A174.4°100.8°
O2C13C12H12177.2°122.9°
O2C13C12H12A60.3°1.6°
C4C3H3H3A119.4°120.0°
N3C5C6C77.9°0.0°
N3C5C6C11173.4°179.7°
C5C6C7C11178.8°179.7°
C5C6C7C8178.9°180.0°
C5C6C11C10179.2°179.7°
C5C6C7H71.1°0.1°
C5C6C11H110.8°0.0°
C6C7C8H7180.0°179.9°
C6C7C8C90.1°0.0°
C7C6C11C100.4°0.6°
C6C7C8H8179.9°180.0°
C7C6C11H11179.6°179.7°
C11C6C7C80.1°0.3°
C6C11C10C90.4°0.6°
C6C11C10H11180.0°179.7°
C11C6C7H7179.9°179.7°
C6C11C10H10179.6°179.7°
C7C8C9H8180.0°180.0°
C7C8C9C100.1°0.0°
C7C8C9H9179.8°180.0°
C8C9C10H9180.0°179.9°
C8C9C10C110.1°0.4°
C9C8C7H7179.8°180.0°
C8C9C10H10179.9°179.9°
C9C10C11H10180.0°179.7°
C10C9C8H8179.9°180.0°
C9C10C11H11179.6°179.7°
C11C10C9H9179.9°179.7°
C12C13C1H1167.0°96.4°
C12C13C1H1A71.1°140.3°
C12C13O2HO277.3°177.2°
C13C12H12H12A123.5°121.2°
H1C1C2H296.8°160.6°
H1C1C2H2A24.9°37.4°
H1C1C13H1376.8°144.6°
H1AC1C2H225.0°37.3°
H1AC1C2H2A146.8°85.8°
H1AC1C13H1345.1°21.3°
HO2O2C13H1351.6°60.6°
H7C7C8H80.2°0.1°
H8C8C9H90.2°0.1°
H9C9C10H100.1°0.0°
H10C10C11H110.4°0.0°
H12C12C13H1352.9°0.8°
H12AC12C13H1369.6°120.5°

248636

PDB entries from 2026-02-04

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