Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

P5O

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CASOARsing1.43Å1.43Å
OARCADsing1.36Å1.37Å
OAQCAFsing1.36Å1.37Å
CADCAFdoub1.39Å1.39ÅAromatic
CADCABsing1.38Å1.39ÅAromatic
CAFCAEsing1.39Å1.39ÅAromatic
CABCAAdoub1.40Å1.39ÅAromatic
CAECACdoub1.38Å1.39ÅAromatic
CAACACsing1.40Å1.40ÅAromatic
CAACAGsing1.47Å1.39Å
CAHCAGdoub1.34Å1.54Å
CAHCAIsing1.47Å1.39Å
CAICAKdoub1.40Å1.39ÅAromatic
CAICAJsing1.40Å1.39ÅAromatic
CAKCAMsing1.38Å1.40ÅAromatic
CAJCALdoub1.38Å1.38ÅAromatic
CAMOAPsing1.36Å1.35Å
CAMCANdoub1.39Å1.38ÅAromatic
CALCANsing1.39Å1.38ÅAromatic
CALOAOsing1.36Å1.36Å
CABH1sing1.08Å1.08Å
CACH2sing1.08Å1.08Å
CAEH3sing1.08Å1.08Å
CAGH4sing1.08Å1.08Å
CAHH6sing1.08Å1.08Å
CAJH8sing1.08Å1.08Å
CAKH9sing1.08Å1.08Å
CANH10sing1.08Å1.08Å
CASH11sing1.09Å1.10Å
CASH12sing1.09Å1.10Å
CASH13sing1.09Å1.10Å
OAOH14sing0.97Å0.95Å
OAPH15sing0.97Å0.95Å
OAQH16sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CASOARCAD111.9°117.0°
OARCASH11109.5°109.5°
OARCASH12109.5°109.5°
OARCASH13109.5°109.5°
OARCADCAF117.0°120.0°
OARCADCAB122.6°120.0°
OAQCAFCAD117.0°119.9°
OAQCAFCAE122.5°119.9°
CAFOAQH16109.5°114.0°
CAFCADCAB120.4°120.0°
CADCAFCAE120.5°120.1°
CADCABCAA119.3°119.8°
CADCABH1120.3°120.1°
CAFCAECAC119.1°120.2°
CAFCAEH3120.5°119.9°
CABCAACAC120.2°119.8°
CABCAACAG119.7°120.1°
CAACABH1120.3°120.1°
CAECACCAA120.5°120.0°
CAECACH2119.8°120.0°
CACCAEH3120.5°119.9°
CACCAACAG120.1°120.1°
CAACACH2119.8°120.0°
CAACAGCAH116.2°119.9°
CAACAGH4121.9°120.0°
CAGCAHCAI113.4°119.9°
CAHCAGH4121.9°120.0°
CAGCAHH6123.3°120.0°
CAHCAICAK122.0°120.1°
CAHCAICAJ118.0°120.2°
CAICAHH6123.3°120.0°
CAKCAICAJ120.0°119.8°
CAICAKCAM118.9°119.9°
CAICAKH9120.6°120.1°
CAICAJCAL120.6°119.9°
CAICAJH8119.7°120.0°
CAKCAMOAP121.4°120.0°
CAKCAMCAN120.7°120.1°
CAMCAKH9120.6°120.0°
CAJCALCAN119.9°120.1°
CAJCALOAO120.4°120.0°
CALCAJH8119.7°120.1°
OAPCAMCAN117.9°119.9°
CAMOAPH15109.5°114.0°
CAMCANCAL119.9°120.2°
CAMCANH10120.1°119.9°
CANCALOAO119.7°119.9°
CALCANH10120.0°119.9°
CALOAOH14109.5°114.0°
H11CASH12109.4°109.4°
H11CASH13109.5°109.4°
H12CASH13109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CASOARCADCAF172.6°180.0°
CASOARCADCAB7.1°0.3°
OARCASH11H12120.0°120.1°
OARCASH11H13120.0°120.0°
OARCASH12H13120.0°120.0°
OARCADCAFOAQ0.2°0.4°
OARCADCAFCAB179.7°179.7°
OARCADCAFCAE179.6°180.0°
OARCADCABCAA179.8°179.7°
OARCADCABH10.2°0.2°
CADOARCASH11180.0°180.0°
CADOARCASH1260.0°60.0°
CADOARCASH1360.0°60.1°
OAQCAFCADCAE179.4°179.7°
OAQCAFCADCAB179.5°179.9°
OAQCAFCAECAC179.6°179.8°
OAQCAFCAEH30.4°0.3°
CAFCADCABCAA0.1°0.0°
CADCAFCAECAC0.2°0.5°
CAFCADCABH1179.9°179.9°
CADCAFCAEH3179.8°180.0°
CADCAFOAQH16180.0°90.0°
CABCADCAFCAE0.1°0.3°
CADCABCAAH1180.0°179.9°
CADCABCAACAC0.2°0.0°
CADCABCAACAG179.8°179.7°
CAFCAECACH3180.0°179.5°
CAFCAECACCAA0.2°0.5°
CAFCAECACH2179.8°179.4°
CAECAFOAQH160.6°90.3°
CABCAACACCAE0.0°0.2°
CABCAACACCAG179.9°179.8°
CABCAACAGCAH24.0°179.7°
CABCAACACH2180.0°179.7°
CABCAACAGH4156.0°0.2°
CAECACCAAH2180.0°179.9°
CAECACCAACAG179.9°180.0°
CACCAACAGCAH156.0°0.1°
CACCAACABH1179.8°180.0°
CAACACCAEH3179.8°180.0°
CACCAACAGH424.0°180.0°
CAACAGCAHH4180.0°179.9°
CAACAGCAHCAI179.9°180.0°
CAGCAACABH10.2°0.2°
CAGCAACACH20.0°0.0°
CAACAGCAHH60.1°0.1°
CAGCAHCAIH6180.0°179.9°
CAGCAHCAICAK173.7°180.0°
CAGCAHCAICAJ6.3°0.2°
CAHCAICAKCAJ179.9°179.7°
CAHCAICAKCAM179.7°180.0°
CAHCAICAJCAL179.9°180.0°
CAICAHCAGH40.1°0.1°
CAHCAICAJH80.1°0.0°
CAHCAICAKH90.2°0.0°
CAICAKCAMH9180.0°180.0°
CAKCAICAJCAL0.1°0.3°
CAICAKCAMOAP180.0°180.0°
CAICAKCAMCAN0.4°0.0°
CAKCAICAHH66.3°0.0°
CAKCAICAJH8179.9°179.7°
CAJCAICAKCAM0.2°0.3°
CAICAJCALH8180.0°180.0°
CAICAJCALCAN0.1°0.0°
CAICAJCALOAO179.9°180.0°
CAJCAICAHH6173.8°179.7°
CAJCAICAKH9179.8°179.7°
CAKCAMOAPCAN179.6°180.0°
CAKCAMCANCAL0.4°0.3°
CAKCAMCANH10179.5°180.0°
CAKCAMOAPH15180.0°90.0°
CAJCALCANCAM0.3°0.3°
CAJCALCANOAO179.8°180.0°
CAJCALCANH10179.7°180.0°
CAJCALOAOH14180.0°90.0°
OAPCAMCANCAL179.9°179.7°
OAPCAMCAKH90.0°0.0°
OAPCAMCANH100.1°0.0°
CAMCANCALH10180.0°179.7°
CAMCANCALOAO179.9°179.7°
CANCAMCAKH9179.6°180.0°
CANCAMOAPH150.4°90.0°
CANCALCAJH8179.9°180.0°
CANCALOAOH140.2°90.1°
OAOCALCAJH80.1°0.0°
OAOCALCANH100.1°0.0°
H2CACCAEH30.2°0.0°
H4CAGCAHH6179.9°180.0°
H11CASH12H13120.0°119.9°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon