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SummaryGeometryRelated PDB entries

P4B

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O21C09sing1.43Å1.39Å
C09N08sing1.47Å1.46Å
C09C10sing1.53Å1.54Å
O07C05doub1.21Å1.25Å
N08C04sing1.47Å1.48Å
C05O06sing1.34Å1.29Å
C05C04sing1.51Å1.55Å
C04C03sing1.53Å1.57Å
C03C02sing1.53Å1.56Å
C02N01sing1.47Å1.45Å
C10H102sing1.09Å1.10Å
C10H101sing1.09Å1.10Å
C10H103sing1.09Å1.10Å
C02H021sing1.09Å1.10Å
C02H022sing1.09Å1.10Å
C03H032sing1.09Å1.10Å
C03H031sing1.09Å1.10Å
C04H041sing1.09Å1.10Å
C09H1sing1.09Å1.10Å
N01H2sing1.01Å1.00Å
N01H012sing1.01Å1.00Å
N08H3sing1.01Å1.00Å
O06H6sing0.97Å0.95Å
O21H211sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O21C09N08103.8°109.5°
O21C09C10103.1°109.4°
O21C09H1113.8°109.5°
C09O21H211109.5°114.0°
N08C09C10111.8°109.5°
C09N08C04113.9°111.0°
N08C09H1112.5°109.5°
C09N08H3108.3°111.0°
C09C10H102109.5°109.5°
C09C10H101109.5°109.5°
C09C10H103109.5°109.5°
C10C09H1111.3°109.4°
O07C05O06119.6°120.0°
O07C05C04116.2°120.0°
N08C04C05106.1°109.4°
N08C04C03112.1°109.5°
N08C04H041109.8°109.5°
C04N08H3108.4°111.0°
O06C05C04124.2°120.0°
C05O06H6109.5°117.0°
C05C04C03111.2°109.4°
C05C04H041108.9°109.4°
C04C03C02118.0°109.4°
C04C03H032107.3°109.5°
C04C03H031107.3°109.5°
C03C04H041108.7°109.5°
C03C02N01106.2°109.5°
C03C02H021110.3°109.4°
C03C02H022110.3°109.5°
C02C03H032107.3°109.5°
C02C03H031107.3°109.4°
N01C02H021110.3°109.5°
N01C02H022110.3°109.5°
C02N01H2109.5°111.0°
C02N01H012109.5°111.0°
H102C10H101109.5°109.4°
H102C10H103109.5°109.4°
H101C10H103109.5°109.4°
H021C02H022109.5°109.5°
H032C03H031109.5°109.5°
H2N01H012109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O21C09N08C10110.5°120.0°
O21C09N08H1123.4°120.0°
O21C09C10H1122.3°119.9°
O21C09N08C0450.3°100.0°
O21C09C10H102180.0°60.0°
O21C09C10H10160.0°180.0°
O21C09C10H10360.0°60.0°
O21C09N08H370.4°136.1°
N08C09C10H1126.8°120.1°
C09N08C04H3120.7°123.9°
C09N08C04C0591.5°85.0°
C09N08C04C03147.0°155.0°
N08C09C10H10269.1°60.0°
N08C09C10H101170.9°60.0°
N08C09C10H10350.9°180.0°
C09N08C04H04126.1°35.0°
N08C09O21H2110.1°179.9°
C10C09N08C0460.2°140.0°
C09C10H102H101120.0°120.0°
C09C10H102H103120.0°120.1°
C09C10H101H103120.0°120.1°
C10C09N08H3179.1°16.1°
C10C09O21H211116.6°59.9°
O07C05C04N0863.0°0.0°
O07C05O06C04178.0°180.0°
O07C05C04C03174.9°120.0°
O07C05C04H04155.2°120.0°
O07C05O06H60.0°0.0°
N08C04C05O06115.1°180.0°
N08C04C05C03122.1°120.0°
N08C04C05H041118.2°120.0°
N08C04C03H041121.6°120.1°
N08C04C03C0269.5°65.1°
N08C04C03H032169.3°54.9°
N08C04C03H03151.8°175.0°
C04N08C09H1173.7°20.0°
O06C05C04C037.0°60.0°
O06C05C04H041126.7°60.0°
C05C04C03H041119.8°120.0°
C05C04C03C02172.0°175.0°
C05C04C03H03250.7°65.0°
C05C04C03H03166.8°55.0°
C05C04N08H329.2°38.9°
C04C05O06H6178.0°180.0°
C04C03C02H032121.2°120.0°
C04C03C02H031121.2°120.0°
C04C03C02N01179.4°180.0°
C04C03C02H02161.1°60.0°
C04C03C02H02259.9°59.9°
C04C03H032H031116.1°120.1°
C03C04N08H392.4°81.0°
C03C02N01H021119.5°119.9°
C03C02N01H022119.5°120.0°
C03C02H021H022121.5°120.0°
C02C03H032H031116.2°120.0°
C02C03C04H04152.1°55.0°
C03C02N01H2180.0°56.0°
C03C02N01H01260.0°180.0°
N01C02H021H022121.5°120.1°
N01C02C03H03258.2°60.0°
N01C02C03H03159.4°60.0°
C02N01H2H012120.0°123.9°
H102C10H101H103120.0°119.9°
H102C10C09H157.7°180.0°
H101C10C09H162.4°60.0°
H103C10C09H1177.7°60.0°
H021C02C03H032177.7°60.0°
H021C02C03H03160.1°180.0°
H021C02N01H260.5°63.9°
H021C02N01H012179.5°60.0°
H022C02C03H03261.3°179.9°
H022C02C03H031178.9°60.1°
H022C02N01H260.5°176.0°
H022C02N01H01259.5°60.0°
H032C03C04H04169.1°175.0°
H031C03C04H041173.3°64.9°
H041C04N08H3146.7°158.9°
H1C09N08H353.0°103.9°
H1C09O21H211122.8°60.0°

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PDB entries from 2024-07-17

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