Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

P3J

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C0C1doub1.36Å1.41ÅAromatic
C0N1sing1.39Å1.33Å
C0N2sing1.36Å1.38ÅAromatic
C1C5sing1.41Å1.38ÅAromatic
N2Nsing1.40Å1.36ÅAromatic
C3C4sing1.39Å1.39ÅAromatic
C3N6doub1.32Å1.34ÅAromatic
C4C5sing1.48Å1.48Å
C4C9doub1.40Å1.39ÅAromatic
C5Ndoub1.32Å1.35ÅAromatic
N6C7sing1.32Å1.34ÅAromatic
C7C8doub1.38Å1.38ÅAromatic
C8C9sing1.38Å1.38ÅAromatic
C1H1sing1.08Å1.08Å
N1H11Nsing0.97Å1.00Å
N1H12Nsing0.97Å1.00Å
N2H2sing0.97Å1.00Å
C3H3sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C0N1126.1°126.1°
C1C0N2108.9°107.7°
C0C1C5107.4°107.8°
C0C1H1126.3°126.1°
N1C0N2125.0°126.2°
C0N1H11N109.5°120.1°
C0N1H12N109.5°120.0°
C0N2N104.6°108.0°
C0N2H2127.7°126.0°
C1C5C4130.7°125.9°
C1C5N105.9°108.2°
C5C1H1126.3°126.2°
N2NC5113.1°108.4°
NN2H2127.7°126.0°
C4C3N6123.8°120.6°
C3C4C5121.6°120.6°
C3C4C9117.3°118.9°
C4C3H3118.1°119.7°
C3N6C7117.5°121.8°
N6C3H3118.1°119.7°
C5C4C9121.1°120.6°
C4C5N123.3°125.9°
C4C9C8119.9°118.4°
C4C9H9120.1°120.8°
N6C7C8123.3°121.0°
N6C7H7118.3°119.5°
C7C8C9118.2°119.3°
C8C7H7118.4°119.5°
C7C8H8120.9°120.4°
C8C9H9120.0°120.8°
C9C8H8120.9°120.4°
H11NN1H12N109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C0N1N2179.3°179.6°
C0C1C5H1180.0°180.0°
C1C0N2N0.3°0.0°
C0C1C5C4178.1°180.0°
C0C1C5N0.2°0.5°
C1C0N1H11N180.0°0.0°
C1C0N1H12N60.0°180.0°
C1C0N2H2179.8°180.0°
N1C0C1C5179.4°180.0°
N1C0N2N179.2°179.7°
N1C0C1H10.6°0.0°
C0N1H11NH12N120.0°179.9°
N1C0N2H20.8°0.3°
N2C0C1C50.0°0.3°
C0N2NH2180.0°179.9°
C0N2NC50.4°0.2°
N2C0C1H1180.0°179.7°
N2C0N1H11N0.6°179.7°
N2C0N1H12N119.4°0.4°
C1C5NN20.4°0.4°
C1C5C4C36.8°5.0°
C1C5C4N178.0°179.5°
C1C5C4C9172.8°174.9°
N2NC5C4178.0°180.0°
C4C3N6H3180.0°179.7°
C3C4C5C9179.6°179.9°
C3C4C5N171.2°175.5°
C4C3N6C70.0°0.0°
C3C4C9C80.4°0.0°
C3C4C9H9179.6°180.0°
N6C3C4C5179.4°180.0°
N6C3C4C90.2°0.0°
C3N6C7C80.1°0.0°
C3N6C7H7179.9°179.9°
C5C4C9C8179.3°180.0°
C4C5C1H12.0°0.1°
C5C4C3H30.6°0.3°
C5C4C9H90.7°0.1°
C9C4C5N9.2°4.6°
C4C9C8C70.3°0.0°
C4C9C8H9180.0°179.9°
C9C4C3H3179.8°179.7°
C4C9C8H8179.7°180.0°
NC5C1H1179.8°179.5°
C5NN2H2179.6°179.7°
N6C7C8H7180.0°180.0°
N6C7C8C90.1°0.0°
C7N6C3H3180.0°179.7°
N6C7C8H8179.9°180.0°
C7C8C9H8180.0°180.0°
C7C8C9H9179.7°179.9°
C9C8C7H7179.9°180.0°
H9C9C8H80.3°0.1°
H7C7C8H80.1°0.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon