Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

P2H

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C7C8sing1.53Å1.50Å
C7N12sing1.47Å1.46Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8P9sing1.82Å1.83Å
C8O13sing1.43Å1.45Å
C8P14sing1.82Å1.81Å
P9O10sing1.61Å1.52Å
P9O11sing1.61Å1.53Å
P9O12doub1.48Å1.48Å
N12C13doub1.32Å1.40ÅAromatic
N12C17sing1.32Å1.34ÅAromatic
C13C14sing1.38Å1.40ÅAromatic
C13H13sing1.08Å1.08Å
O13HO13sing0.97Å0.95Å
C14C15doub1.38Å1.41ÅAromatic
C14H14sing1.08Å1.08Å
P14O15sing1.61Å1.53Å
P14O16sing1.61Å1.52Å
P14O17doub1.48Å1.52Å
C15C16sing1.40Å1.41ÅAromatic
C15H15sing1.08Å1.08Å
C16C17doub1.39Å1.38ÅAromatic
C16C18sing1.48Å1.51ÅAromatic
C17H17sing1.08Å1.08Å
C18C19doub1.39Å1.39ÅAromatic
C18C23sing1.39Å1.43ÅAromatic
C19C20sing1.38Å1.40ÅAromatic
C19H19sing1.08Å1.08Å
C20C21doub1.38Å1.41ÅAromatic
C20H20sing1.08Å1.08Å
C21C22sing1.38Å1.40ÅAromatic
C21H21sing1.08Å1.08Å
C22C23doub1.38Å1.39ÅAromatic
C22H22sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
O10H131sing0.97Å0.95Å
O11H141sing0.97Å0.95Å
O15H151sing0.97Å0.95Å
O16H16sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C8C7N12121.7°109.4°
C8C7H7105.6°109.5°
C8C7H7A105.6°109.5°
C7C8P9111.9°109.5°
C7C8O13117.4°109.5°
C7C8P1492.6°109.4°
N12C7H7105.6°109.5°
N12C7H7A105.6°109.4°
C7N12C13127.9°119.1°
C7N12C17106.2°119.1°
H7C7H7A113.1°109.5°
P9C8O13111.6°109.5°
P9C8P14112.8°109.5°
C8P9O10111.1°109.5°
C8P9O11110.5°109.5°
C8P9O1299.3°109.5°
O13C8P14109.1°109.4°
C8O13HO13109.5°113.9°
C8P14O15106.0°109.5°
C8P14O16105.7°109.5°
C8P14O17106.9°109.5°
O10P9O11113.6°109.5°
O10P9O12112.8°109.5°
P9O10H131109.5°114.0°
O11P9O12108.5°109.5°
P9O11H141109.5°114.0°
C13N12C17125.7°121.9°
N12C13C14114.4°121.0°
N12C13H13122.8°119.5°
N12C17C16121.1°120.6°
N12C17H17119.5°119.7°
C14C13H13122.8°119.5°
C13C14C15120.4°119.3°
C13C14H14119.8°120.3°
C15C14H14119.8°120.4°
C14C15C16121.9°118.3°
C14C15H15119.0°120.8°
O15P14O16115.5°109.4°
O15P14O17111.3°109.5°
P14O15H151109.5°114.0°
O16P14O17110.8°109.5°
P14O16H16109.5°114.0°
C16C15H15119.1°120.8°
C15C16C17115.8°118.9°
C15C16C18126.2°120.5°
C17C16C18116.6°120.6°
C16C17H17119.4°119.7°
C16C18C19122.7°120.1°
C16C18C23119.1°120.1°
C19C18C23118.2°119.8°
C18C19C20118.9°119.9°
C18C19H19120.6°120.1°
C18C23C22123.0°119.8°
C18C23H23118.5°120.1°
C20C19H19120.5°120.0°
C19C20C21122.3°120.1°
C19C20H20118.8°120.0°
C21C20H20118.9°119.9°
C20C21C22119.5°120.2°
C20C21H21120.3°119.9°
C22C21H21120.2°119.9°
C21C22C23118.2°120.1°
C21C22H22120.9°120.0°
C23C22H22120.9°119.9°
C22C23H23118.5°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C8C7N12H7120.0°120.0°
C8C7N12H7A120.0°119.9°
C8C7H7H7A114.9°120.1°
C7C8P9O13133.9°120.1°
C7C8P9P14102.8°120.0°
C7C8O13P14103.5°120.0°
C7C8P9O1073.3°60.0°
C7C8P9O1153.8°180.0°
C7C8P9O12167.7°59.9°
C8C7N12C1310.4°97.3°
C8C7N12C17165.7°83.0°
C7C8O13HO13160.6°60.0°
C7C8P14O1561.4°55.2°
C7C8P14O16175.5°64.8°
C7C8P14O1757.5°175.2°
N12C7H7H7A115.0°120.0°
N12C7C8P9151.2°65.7°
N12C7C8O1320.1°54.4°
N12C7C8P1493.0°174.4°
C7N12C13C17175.4°179.7°
C7N12C13C14172.6°180.0°
C7N12C13H137.4°0.0°
C7N12C17C16179.6°179.8°
C7N12C17H170.4°0.0°
H7C7C8P988.8°54.3°
H7C7C8O13140.1°174.4°
H7C7C8P1427.0°65.6°
H7C7N12C13130.4°22.7°
H7C7N12C1745.7°157.0°
H7AC7C8P931.1°174.4°
H7AC7C8O1399.9°65.5°
H7AC7C8P14147.0°54.4°
H7AC7N12C13109.6°142.8°
H7AC7N12C1774.3°36.9°
P9C8O13P14125.3°120.0°
C8P9O10O11125.4°120.0°
C8P9O10O12110.6°120.0°
C8P9O11O12107.9°120.0°
P9C8O13HO1329.4°60.0°
P9C8P14O1553.7°175.2°
P9C8P14O1669.4°55.2°
P9C8P14O17172.6°64.8°
C8P9O10H131110.6°180.0°
C8P9O11H141107.9°60.0°
O13C8P9O1060.7°60.0°
O13C8P9O11172.2°60.0°
O13C8P9O1258.3°180.0°
O13C8P14O15178.4°64.8°
O13C8P14O1655.3°175.2°
O13C8P14O1762.8°55.2°
P14C8P9O10176.1°180.0°
P14C8P9O1149.0°60.0°
P14C8P9O1264.9°60.0°
P14C8O13HO1395.9°180.0°
C8P14O15O16116.6°120.0°
C8P14O15O17115.9°120.0°
C8P14O16O17115.4°120.0°
C8P14O15H151116.0°55.0°
C8P14O16H16115.4°180.0°
O10P9O11O12126.4°120.0°
O10P9O11H141126.4°60.0°
O11P9O10H131124.0°60.0°
O12P9O10H1310.0°60.0°
O12P9O11H1410.0°179.9°
N12C13C14H13180.0°180.0°
N12C13C14C153.6°0.0°
N12C13C14H14176.4°180.0°
C13N12C17C164.2°0.5°
C13N12C17H17175.8°179.7°
C17N12C13C142.8°0.3°
C17N12C13H13177.2°179.7°
N12C17C16C159.7°0.5°
N12C17C16H17180.0°179.7°
N12C17C16C18177.0°179.7°
C13C14C15H14180.0°180.0°
C13C14C15C162.2°0.0°
C13C14C15H15177.8°179.9°
H13C13C14C15176.4°180.0°
H13C13C14H143.6°0.0°
C14C15C16H15180.0°179.9°
C14C15C16C178.8°0.2°
C14C15C16C18174.7°180.0°
H14C14C15C16177.8°180.0°
H14C14C15H152.2°0.0°
O15P14O16O17127.7°120.0°
O15P14O16H16127.7°60.0°
O16P14O15H151127.4°65.0°
O17P14O15H1510.0°175.0°
O17P14O16H160.0°60.0°
C15C16C17C18167.3°179.8°
C15C16C17H17170.3°179.8°
C15C16C18C199.4°0.0°
C15C16C18C23169.0°179.8°
H15C15C16C17171.2°179.8°
H15C15C16C185.3°0.0°
C17C16C18C19175.1°179.8°
C17C16C18C233.2°0.0°
C18C16C17H173.0°0.0°
C16C18C19C23178.3°179.7°
C16C18C19C20178.6°180.0°
C16C18C19H191.4°0.1°
C16C18C23C22179.7°179.7°
C16C18C23H230.3°0.1°
C18C19C20H19180.0°179.9°
C18C19C20C212.4°0.0°
C18C19C20H20177.6°180.0°
C19C18C23C221.9°0.5°
C19C18C23H23178.1°179.7°
C23C18C19C203.1°0.3°
C23C18C19H19176.9°179.8°
C18C23C22C210.1°0.5°
C18C23C22H23180.0°179.8°
C18C23C22H22179.9°179.7°
C19C20C21H20180.0°180.0°
C19C20C21C220.3°0.0°
C19C20C21H21179.7°180.0°
H19C19C20C21177.6°179.9°
H19C19C20H202.4°0.1°
C20C21C22H21180.0°180.0°
C20C21C22C230.9°0.2°
C20C21C22H22179.1°180.0°
H20C20C21C22179.7°179.9°
H20C20C21H210.3°0.0°
C21C22C23H22180.0°179.8°
C21C22C23H23179.8°179.7°
H21C21C22C23179.1°179.8°
H21C21C22H220.9°0.0°
H22C22C23H230.1°0.1°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon