Obsolete: P1P
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | sing | 1.57Å | 1.48Å | |
| P | OP2 | doub | 1.57Å | 1.49Å | |
| P | O5' | sing | 1.72Å | 1.59Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| C5' | C4' | sing | 1.53Å | 1.52Å | |
| C5' | H5' | sing | 1.09Å | 1.12Å | |
| C5' | H5'' | sing | 1.09Å | 1.12Å | |
| C4' | C3' | sing | 1.53Å | 1.53Å | |
| C4' | H4'1 | sing | 1.09Å | 1.12Å | |
| C4' | H4'2 | sing | 1.09Å | 1.12Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | H3'1 | sing | 1.09Å | 1.11Å | |
| C3' | H3'2 | sing | 1.09Å | 1.11Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 119.9° | 120.0° |
| OP1 | P | O5' | 107.2° | 120.0° |
| OP2 | P | O5' | 109.8° | 120.0° |
| P | O5' | C5' | 119.7° | 106.8° |
| O5' | C5' | C4' | 111.6° | 109.5° |
| O5' | C5' | H5' | 111.4° | 109.5° |
| O5' | C5' | H5'' | 111.5° | 109.5° |
| C4' | C5' | H5' | 111.4° | 109.5° |
| C4' | C5' | H5'' | 111.4° | 109.5° |
| C5' | C4' | C3' | 118.2° | 109.5° |
| C5' | C4' | H4'1 | 109.0° | 109.5° |
| C5' | C4' | H4'2 | 109.0° | 109.5° |
| H5' | C5' | H5'' | 98.9° | 109.4° |
| C3' | C4' | H4'1 | 109.1° | 109.5° |
| C3' | C4' | H4'2 | 109.1° | 109.5° |
| C4' | C3' | O3' | 110.6° | 109.5° |
| C4' | C3' | H3'1 | 111.8° | 109.5° |
| C4' | C3' | H3'2 | 111.7° | 109.5° |
| H4'1 | C4' | H4'2 | 101.0° | 109.4° |
| O3' | C3' | H3'1 | 111.8° | 109.5° |
| O3' | C3' | H3'2 | 111.8° | 109.4° |
| H3'1 | C3' | H3'2 | 98.6° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | O5' | 124.7° | 179.9° |
| OP1 | P | O5' | C5' | 76.8° | 164.9° |
| OP2 | P | O5' | C5' | 55.0° | 15.0° |
| P | O5' | C5' | C4' | 166.0° | 180.0° |
| P | O5' | C5' | H5' | 68.7° | 60.0° |
| P | O5' | C5' | H5'' | 40.7° | 60.0° |
| O5' | C5' | C4' | H5' | 125.3° | 120.1° |
| O5' | C5' | C4' | H5'' | 125.3° | 120.0° |
| O5' | C5' | H5' | H5'' | 117.3° | 120.0° |
| O5' | C5' | C4' | C3' | 44.8° | 180.0° |
| O5' | C5' | C4' | H4'1 | 80.5° | 59.9° |
| O5' | C5' | C4' | H4'2 | 170.1° | 60.0° |
| C4' | C5' | H5' | H5'' | 117.3° | 119.9° |
| C5' | C4' | C3' | H4'1 | 125.3° | 120.1° |
| C5' | C4' | C3' | H4'2 | 125.3° | 120.0° |
| C5' | C4' | H4'1 | H4'2 | 114.7° | 120.0° |
| C5' | C4' | C3' | O3' | 170.1° | 180.0° |
| C5' | C4' | C3' | H3'1 | 64.7° | 60.0° |
| C5' | C4' | C3' | H3'2 | 44.8° | 60.0° |
| H5' | C5' | C4' | C3' | 170.1° | 59.9° |
| H5' | C5' | C4' | H4'1 | 44.8° | 180.0° |
| H5' | C5' | C4' | H4'2 | 64.6° | 60.1° |
| H5'' | C5' | C4' | C3' | 80.5° | 60.0° |
| H5'' | C5' | C4' | H4'1 | 154.2° | 60.1° |
| H5'' | C5' | C4' | H4'2 | 44.8° | 180.0° |
| C3' | C4' | H4'1 | H4'2 | 114.9° | 120.0° |
| C4' | C3' | O3' | H3'1 | 125.2° | 120.0° |
| C4' | C3' | O3' | H3'2 | 125.2° | 120.0° |
| C4' | C3' | H3'1 | H3'2 | 117.6° | 120.0° |
| H4'1 | C4' | C3' | O3' | 44.8° | 59.9° |
| H4'1 | C4' | C3' | H3'1 | 170.1° | 60.1° |
| H4'1 | C4' | C3' | H3'2 | 80.5° | 179.9° |
| H4'2 | C4' | C3' | O3' | 64.7° | 60.0° |
| H4'2 | C4' | C3' | H3'1 | 60.6° | 180.0° |
| H4'2 | C4' | C3' | H3'2 | 170.0° | 60.0° |
| O3' | C3' | H3'1 | H3'2 | 117.8° | 120.0° |
