P1E
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C4 | N7 | sing | 1.40Å | 1.39Å | |
C4 | C5 | doub | 1.39Å | 1.41Å | Aromatic |
C4 | C3 | sing | 1.39Å | 1.41Å | Aromatic |
C6 | C5 | sing | 1.38Å | 1.38Å | Aromatic |
C6 | C1 | doub | 1.38Å | 1.41Å | Aromatic |
C9 | N14 | doub | 1.32Å | 1.32Å | Aromatic |
C9 | N10 | sing | 1.32Å | 1.33Å | Aromatic |
C9 | N7 | sing | 1.39Å | 1.37Å | |
C13 | C12 | doub | 1.38Å | 1.37Å | Aromatic |
C13 | N14 | sing | 1.33Å | 1.34Å | Aromatic |
F22 | C15 | sing | 1.40Å | 1.37Å | |
C15 | F16 | sing | 1.40Å | 1.38Å | |
C15 | F21 | sing | 1.40Å | 1.40Å | |
C15 | C12 | sing | 1.51Å | 1.51Å | |
C12 | C11 | sing | 1.40Å | 1.40Å | Aromatic |
C11 | N8 | sing | 1.38Å | 1.39Å | |
C11 | N10 | doub | 1.33Å | 1.33Å | Aromatic |
N8 | C25 | sing | 1.47Å | 1.45Å | |
C25 | C28 | sing | 1.54Å | 1.55Å | |
C25 | C24 | sing | 1.55Å | 1.57Å | |
C28 | C31 | sing | 1.54Å | 1.54Å | |
C31 | C27 | sing | 1.54Å | 1.55Å | |
C27 | C24 | sing | 1.55Å | 1.53Å | |
C24 | N26 | sing | 1.47Å | 1.48Å | |
N26 | C30 | sing | 1.47Å | 1.48Å | |
N26 | C29 | sing | 1.47Å | 1.47Å | |
C3 | C2 | doub | 1.38Å | 1.39Å | Aromatic |
C2 | C1 | sing | 1.38Å | 1.40Å | Aromatic |
C1 | S18 | sing | 1.76Å | 1.81Å | |
S18 | O19 | doub | 1.42Å | 1.44Å | |
S18 | O20 | doub | 1.42Å | 1.42Å | |
S18 | N17 | sing | 1.66Å | 1.67Å | |
N17 | C23 | sing | 1.47Å | 1.48Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C13 | H13 | sing | 1.08Å | 1.08Å | |
N8 | HN8 | sing | 0.97Å | 1.00Å | |
C25 | H25 | sing | 1.09Å | 1.10Å | |
C28 | H28 | sing | 1.09Å | 1.10Å | |
C28 | H28A | sing | 1.09Å | 1.10Å | |
C31 | H31 | sing | 1.09Å | 1.10Å | |
C31 | H31A | sing | 1.09Å | 1.10Å | |
C27 | H27 | sing | 1.09Å | 1.10Å | |
C27 | H27A | sing | 1.09Å | 1.10Å | |
C24 | H24 | sing | 1.09Å | 1.10Å | |
C30 | H30 | sing | 1.09Å | 1.10Å | |
C30 | H30A | sing | 1.09Å | 1.10Å | |
C30 | H30B | sing | 1.09Å | 1.10Å | |
C29 | H29 | sing | 1.09Å | 1.10Å | |
C29 | H29A | sing | 1.09Å | 1.10Å | |
C29 | H29B | sing | 1.09Å | 1.10Å | |
N7 | HN7 | sing | 0.97Å | 1.00Å | |
C5 | H5 | sing | 1.08Å | 1.08Å | |
C3 | H3 | sing | 1.08Å | 1.08Å | |
C2 | H2 | sing | 1.08Å | 1.08Å | |
N17 | HN17 | sing | 0.97Å | 1.00Å | |
C23 | H23 | sing | 1.09Å | 1.10Å | |
C23 | H23A | sing | 1.09Å | 1.10Å | |
C23 | H23B | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N7 | C4 | C5 | 121.9° | 120.1° |
N7 | C4 | C3 | 117.3° | 120.1° |
C4 | N7 | C9 | 129.1° | 120.0° |
C4 | N7 | HN7 | 115.4° | 120.0° |
C5 | C4 | C3 | 120.7° | 119.8° |
C4 | C5 | C6 | 119.9° | 119.9° |
C4 | C5 | H5 | 120.1° | 120.0° |
C4 | C3 | C2 | 118.3° | 120.0° |
C4 | C3 | H3 | 120.9° | 120.0° |
C5 | C6 | C1 | 120.4° | 120.1° |
C5 | C6 | H6 | 119.8° | 119.9° |
C6 | C5 | H5 | 120.0° | 120.1° |
C6 | C1 | C2 | 119.2° | 120.1° |
C6 | C1 | S18 | 118.2° | 119.9° |
C1 | C6 | H6 | 119.8° | 120.0° |
N14 | C9 | N10 | 121.2° | 121.7° |
N14 | C9 | N7 | 116.6° | 119.2° |
C9 | N14 | C13 | 123.2° | 120.9° |
N10 | C9 | N7 | 122.3° | 119.2° |
C9 | N10 | C11 | 119.6° | 120.6° |
C9 | N7 | HN7 | 115.5° | 120.0° |
C12 | C13 | N14 | 116.8° | 119.3° |
C13 | C12 | C15 | 119.7° | 120.8° |
C13 | C12 | C11 | 119.6° | 118.5° |
C12 | C13 | H13 | 121.6° | 120.4° |
N14 | C13 | H13 | 121.6° | 120.3° |
F22 | C15 | F16 | 103.1° | 109.5° |
F22 | C15 | F21 | 111.2° | 109.4° |
F22 | C15 | C12 | 111.7° | 109.5° |
F16 | C15 | F21 | 112.9° | 109.5° |
F16 | C15 | C12 | 108.4° | 109.5° |
F21 | C15 | C12 | 109.5° | 109.5° |
C15 | C12 | C11 | 120.7° | 120.7° |
C12 | C11 | N8 | 121.0° | 120.5° |
C12 | C11 | N10 | 119.6° | 119.0° |
N8 | C11 | N10 | 119.4° | 120.5° |
C11 | N8 | C25 | 118.3° | 120.0° |
C11 | N8 | HN8 | 106.6° | 120.0° |
N8 | C25 | C28 | 109.5° | 110.5° |
N8 | C25 | C24 | 110.5° | 110.5° |
C25 | N8 | HN8 | 106.6° | 120.0° |
N8 | C25 | H25 | 108.8° | 110.4° |
C28 | C25 | C24 | 109.5° | 104.2° |
C25 | C28 | C31 | 105.3° | 106.6° |
C28 | C25 | H25 | 109.8° | 110.5° |
C25 | C28 | H28 | 110.9° | 110.1° |
C25 | C28 | H28A | 111.8° | 110.0° |
C25 | C24 | C27 | 104.6° | 102.7° |
C25 | C24 | N26 | 111.5° | 110.8° |
C24 | C25 | H25 | 108.7° | 110.6° |
C25 | C24 | H24 | 111.0° | 110.8° |
C28 | C31 | C27 | 106.9° | 106.6° |
C31 | C28 | H28 | 110.9° | 110.0° |
C31 | C28 | H28A | 111.8° | 110.0° |
C28 | C31 | H31 | 110.4° | 110.0° |
C28 | C31 | H31A | 110.9° | 110.0° |
C31 | C27 | C24 | 107.4° | 104.2° |
C27 | C31 | H31 | 110.3° | 110.0° |
C27 | C31 | H31A | 110.9° | 110.0° |
C31 | C27 | H27 | 110.2° | 110.5° |
C31 | C27 | H27A | 110.6° | 110.5° |
C27 | C24 | N26 | 108.1° | 110.7° |
C24 | C27 | H27 | 110.2° | 110.5° |
C24 | C27 | H27A | 110.6° | 110.4° |
C27 | C24 | H24 | 114.1° | 110.7° |
C24 | N26 | C30 | 111.9° | 111.0° |
C24 | N26 | C29 | 109.8° | 111.0° |
N26 | C24 | H24 | 107.6° | 110.8° |
C30 | N26 | C29 | 104.0° | 111.0° |
N26 | C30 | H30 | 109.5° | 109.4° |
N26 | C30 | H30A | 109.5° | 109.5° |
N26 | C30 | H30B | 109.5° | 109.5° |
N26 | C29 | H29 | 109.5° | 109.5° |
N26 | C29 | H29A | 109.4° | 109.5° |
N26 | C29 | H29B | 109.4° | 109.5° |
C3 | C2 | C1 | 121.5° | 120.1° |
C2 | C3 | H3 | 120.8° | 120.0° |
C3 | C2 | H2 | 119.2° | 120.0° |
C2 | C1 | S18 | 122.7° | 119.9° |
C1 | C2 | H2 | 119.2° | 120.0° |
C1 | S18 | O19 | 108.1° | 106.4° |
C1 | S18 | O20 | 107.8° | 106.4° |
C1 | S18 | N17 | 100.4° | 107.2° |
O19 | S18 | O20 | 125.0° | 123.2° |
O19 | S18 | N17 | 106.5° | 106.4° |
O20 | S18 | N17 | 106.4° | 106.4° |
S18 | N17 | C23 | 125.2° | 120.0° |
S18 | N17 | HN17 | 104.5° | 120.0° |
C23 | N17 | HN17 | 104.6° | 120.0° |
N17 | C23 | H23 | 109.5° | 109.5° |
N17 | C23 | H23A | 109.5° | 109.4° |
N17 | C23 | H23B | 109.5° | 109.4° |
H28 | C28 | H28A | 106.3° | 110.1° |
H31 | C31 | H31A | 107.5° | 110.1° |
H27 | C27 | H27A | 107.9° | 110.6° |
H30 | C30 | H30A | 109.4° | 109.5° |
H30 | C30 | H30B | 109.5° | 109.5° |
H30A | C30 | H30B | 109.5° | 109.5° |
H29 | C29 | H29A | 109.5° | 109.4° |
H29 | C29 | H29B | 109.5° | 109.4° |
H29A | C29 | H29B | 109.5° | 109.5° |
H23 | C23 | H23A | 109.4° | 109.5° |
H23 | C23 | H23B | 109.5° | 109.5° |
H23A | C23 | H23B | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N7 | C4 | C5 | C3 | 177.1° | 179.7° |
N7 | C4 | C5 | C6 | 178.1° | 180.0° |
C4 | N7 | C9 | N14 | 174.5° | 5.3° |
C4 | N7 | C9 | N10 | 5.8° | 175.0° |
C4 | N7 | C9 | HN7 | 180.0° | 180.0° |
N7 | C4 | C3 | C2 | 178.9° | 180.0° |
N7 | C4 | C5 | H5 | 1.9° | 0.0° |
N7 | C4 | C3 | H3 | 1.2° | 0.0° |
C4 | C5 | C6 | H5 | 180.0° | 180.0° |
C4 | C5 | C6 | C1 | 0.1° | 0.0° |
C5 | C4 | N7 | C9 | 13.0° | 33.2° |
C5 | C4 | C3 | C2 | 1.7° | 0.3° |
C4 | C5 | C6 | H6 | 179.8° | 180.0° |
C5 | C4 | N7 | HN7 | 167.0° | 146.8° |
C5 | C4 | C3 | H3 | 178.3° | 179.7° |
C3 | C4 | C5 | C6 | 1.0° | 0.2° |
C3 | C4 | N7 | C9 | 169.9° | 147.1° |
C4 | C3 | C2 | H3 | 180.0° | 180.0° |
C4 | C3 | C2 | C1 | 1.4° | 0.0° |
C3 | C4 | N7 | HN7 | 10.2° | 32.9° |
C3 | C4 | C5 | H5 | 179.0° | 179.8° |
C4 | C3 | C2 | H2 | 178.6° | 180.0° |
C5 | C6 | C1 | H6 | 180.0° | 179.9° |
C5 | C6 | C1 | C2 | 0.1° | 0.3° |
C5 | C6 | C1 | S18 | 180.0° | 180.0° |
C6 | C1 | C2 | C3 | 0.6° | 0.3° |
C6 | C1 | C2 | S18 | 179.9° | 179.7° |
C6 | C1 | S18 | O19 | 72.0° | 156.5° |
C6 | C1 | S18 | O20 | 150.4° | 23.6° |
C6 | C1 | S18 | N17 | 39.3° | 90.0° |
C1 | C6 | C5 | H5 | 179.9° | 180.0° |
C6 | C1 | C2 | H2 | 179.4° | 179.7° |
N14 | C9 | N10 | N7 | 179.7° | 179.7° |
C9 | N14 | C13 | C12 | 1.0° | 0.0° |
N14 | C9 | N10 | C11 | 2.0° | 0.0° |
C9 | N14 | C13 | H13 | 179.0° | 180.0° |
N14 | C9 | N7 | HN7 | 5.4° | 174.7° |
N10 | C9 | N14 | C13 | 0.1° | 0.0° |
C9 | N10 | C11 | C12 | 3.0° | 0.0° |
C9 | N10 | C11 | N8 | 178.1° | 179.9° |
N10 | C9 | N7 | HN7 | 174.3° | 5.0° |
N7 | C9 | N14 | C13 | 179.7° | 179.7° |
N7 | C9 | N10 | C11 | 178.3° | 179.7° |
C12 | C13 | N14 | H13 | 180.0° | 180.0° |
C13 | C12 | C15 | F22 | 118.4° | 0.1° |
C13 | C12 | C15 | F16 | 5.5° | 120.0° |
C13 | C12 | C15 | F21 | 118.0° | 120.0° |
C13 | C12 | C15 | C11 | 179.0° | 180.0° |
C13 | C12 | C11 | N8 | 179.1° | 179.9° |
C13 | C12 | C11 | N10 | 2.0° | 0.0° |
N14 | C13 | C12 | C15 | 179.0° | 180.0° |
N14 | C13 | C12 | C11 | 0.0° | 0.0° |
F22 | C15 | F16 | F21 | 120.1° | 120.0° |
F22 | C15 | F16 | C12 | 118.5° | 120.0° |
F22 | C15 | F21 | C12 | 123.9° | 120.0° |
F22 | C15 | C12 | C11 | 60.7° | 180.0° |
F16 | C15 | F21 | C12 | 120.8° | 120.0° |
F16 | C15 | C12 | C11 | 173.5° | 60.0° |
F21 | C15 | C12 | C11 | 63.0° | 60.0° |
C15 | C12 | C11 | N8 | 0.1° | 0.0° |
C15 | C12 | C11 | N10 | 179.0° | 180.0° |
C15 | C12 | C13 | H13 | 1.0° | 0.1° |
C12 | C11 | N8 | N10 | 178.9° | 179.9° |
C12 | C11 | N8 | C25 | 177.9° | 180.0° |
C11 | C12 | C13 | H13 | 180.0° | 180.0° |
C12 | C11 | N8 | HN8 | 57.9° | 0.1° |
C11 | N8 | C25 | HN8 | 120.0° | 179.9° |
C11 | N8 | C25 | C28 | 85.7° | 86.4° |
C11 | N8 | C25 | C24 | 153.6° | 158.8° |
C11 | N8 | C25 | H25 | 34.3° | 36.1° |
N10 | C11 | N8 | C25 | 3.1° | 0.0° |
N10 | C11 | N8 | HN8 | 123.1° | 180.0° |
N8 | C25 | C28 | C24 | 121.3° | 118.7° |
N8 | C25 | C28 | H25 | 119.4° | 122.5° |
N8 | C25 | C24 | H25 | 119.4° | 122.6° |
N8 | C25 | C28 | C31 | 115.1° | 142.3° |
N8 | C25 | C24 | C27 | 130.3° | 156.6° |
N8 | C25 | C24 | N26 | 113.1° | 85.1° |
N8 | C25 | C28 | H28 | 4.9° | 23.1° |
N8 | C25 | C28 | H28A | 123.3° | 98.4° |
N8 | C25 | C24 | H24 | 6.8° | 38.3° |
C28 | C25 | C24 | H25 | 119.9° | 118.8° |
C25 | C28 | C31 | H28 | 120.0° | 119.3° |
C25 | C28 | C31 | H28A | 121.6° | 119.3° |
C25 | C28 | C31 | C27 | 19.6° | 0.0° |
C28 | C25 | C24 | C27 | 9.6° | 38.0° |
C28 | C25 | C24 | N26 | 126.2° | 156.3° |
C28 | C25 | N8 | HN8 | 154.3° | 93.5° |
C25 | C28 | H28 | H28A | 121.7° | 121.5° |
C25 | C28 | C31 | H31 | 100.4° | 119.3° |
C25 | C28 | C31 | H31A | 140.7° | 119.2° |
C28 | C25 | C24 | H24 | 113.9° | 80.3° |
C24 | C25 | C28 | C31 | 6.2° | 23.6° |
C25 | C24 | C27 | C31 | 21.8° | 38.0° |
C25 | C24 | C27 | N26 | 118.9° | 118.3° |
C25 | C24 | C27 | H24 | 121.4° | 118.3° |
C25 | C24 | N26 | H24 | 121.9° | 123.4° |
C25 | C24 | N26 | C30 | 179.5° | 64.1° |
C25 | C24 | N26 | C29 | 64.5° | 172.0° |
C24 | C25 | N8 | HN8 | 33.6° | 21.3° |
C24 | C25 | C28 | H28 | 126.2° | 95.6° |
C24 | C25 | C28 | H28A | 115.4° | 142.9° |
C25 | C24 | C27 | H27 | 141.8° | 156.6° |
C25 | C24 | C27 | H27A | 99.1° | 80.7° |
C28 | C31 | C27 | H31 | 120.0° | 119.3° |
C28 | C31 | C27 | H31A | 121.0° | 119.3° |
C28 | C31 | C27 | C24 | 26.4° | 23.6° |
C31 | C28 | C25 | H25 | 125.5° | 95.2° |
C31 | C28 | H28 | H28A | 121.7° | 121.4° |
C28 | C31 | H31 | H31A | 121.1° | 121.4° |
C28 | C31 | C27 | H27 | 146.4° | 142.2° |
C28 | C31 | C27 | H27A | 94.4° | 95.0° |
C31 | C27 | C24 | H27 | 120.0° | 118.7° |
C31 | C27 | C24 | H27A | 120.8° | 118.7° |
C31 | C27 | C24 | N26 | 140.7° | 156.3° |
C27 | C31 | C28 | H28 | 139.6° | 119.3° |
C27 | C31 | C28 | H28A | 102.0° | 119.3° |
C27 | C31 | H31 | H31A | 121.0° | 121.4° |
C31 | C27 | H27 | H27A | 120.8° | 122.7° |
C31 | C27 | C24 | H24 | 99.7° | 80.4° |
C27 | C24 | N26 | H24 | 123.7° | 123.3° |
C27 | C24 | N26 | C30 | 66.1° | 177.4° |
C27 | C24 | N26 | C29 | 178.9° | 58.7° |
C27 | C24 | C25 | H25 | 110.3° | 80.8° |
C24 | C27 | C31 | H31 | 93.6° | 95.7° |
C24 | C27 | C31 | H31A | 147.4° | 142.9° |
C24 | C27 | H27 | H27A | 120.9° | 122.6° |
C24 | N26 | C30 | C29 | 118.5° | 124.0° |
N26 | C24 | C25 | H25 | 6.3° | 37.5° |
N26 | C24 | C27 | H27 | 99.3° | 85.1° |
N26 | C24 | C27 | H27A | 19.8° | 37.6° |
C24 | N26 | C30 | H30 | 50.1° | 60.0° |
C24 | N26 | C30 | H30A | 170.1° | 180.0° |
C24 | N26 | C30 | H30B | 69.9° | 60.0° |
C24 | N26 | C29 | H29 | 108.8° | 65.6° |
C24 | N26 | C29 | H29A | 131.2° | 174.5° |
C24 | N26 | C29 | H29B | 11.1° | 54.4° |
C30 | N26 | C24 | H24 | 57.6° | 59.3° |
N26 | C30 | H30 | H30A | 120.0° | 120.0° |
N26 | C30 | H30 | H30B | 120.0° | 120.0° |
N26 | C30 | H30A | H30B | 120.0° | 120.0° |
C30 | N26 | C29 | H29 | 11.1° | 170.5° |
C30 | N26 | C29 | H29A | 108.9° | 50.5° |
C30 | N26 | C29 | H29B | 131.1° | 69.5° |
C29 | N26 | C24 | H24 | 57.4° | 64.6° |
C29 | N26 | C30 | H30 | 168.6° | 63.9° |
C29 | N26 | C30 | H30A | 71.4° | 56.0° |
C29 | N26 | C30 | H30B | 48.6° | 176.0° |
N26 | C29 | H29 | H29A | 120.0° | 120.0° |
N26 | C29 | H29 | H29B | 120.0° | 120.0° |
N26 | C29 | H29A | H29B | 120.0° | 120.1° |
C3 | C2 | C1 | H2 | 180.0° | 179.9° |
C3 | C2 | C1 | S18 | 179.3° | 180.0° |
C2 | C1 | S18 | O19 | 108.1° | 23.8° |
C2 | C1 | S18 | O20 | 29.5° | 156.7° |
C2 | C1 | S18 | N17 | 140.6° | 89.7° |
C2 | C1 | C6 | H6 | 179.9° | 179.8° |
C1 | C2 | C3 | H3 | 178.6° | 180.0° |
C1 | S18 | O19 | O20 | 128.4° | 122.9° |
C1 | S18 | O19 | N17 | 107.2° | 114.1° |
C1 | S18 | O20 | N17 | 107.0° | 114.1° |
C1 | S18 | N17 | C23 | 66.8° | 65.0° |
S18 | C1 | C6 | H6 | 0.1° | 0.1° |
S18 | C1 | C2 | H2 | 0.7° | 0.0° |
C1 | S18 | N17 | HN17 | 53.2° | 115.0° |
O19 | S18 | O20 | N17 | 124.5° | 123.0° |
O19 | S18 | N17 | C23 | 179.3° | 48.5° |
O19 | S18 | N17 | HN17 | 59.3° | 131.5° |
O20 | S18 | N17 | C23 | 45.5° | 178.5° |
O20 | S18 | N17 | HN17 | 165.5° | 1.4° |
S18 | N17 | C23 | HN17 | 120.0° | 180.0° |
S18 | N17 | C23 | H23 | 159.4° | 60.0° |
S18 | N17 | C23 | H23A | 80.6° | 60.0° |
S18 | N17 | C23 | H23B | 39.4° | 179.9° |
N17 | C23 | H23 | H23A | 120.0° | 120.0° |
N17 | C23 | H23 | H23B | 120.0° | 120.0° |
N17 | C23 | H23A | H23B | 120.0° | 119.9° |
H6 | C6 | C5 | H5 | 0.1° | 0.0° |
HN8 | N8 | C25 | H25 | 85.7° | 143.9° |
H25 | C25 | C28 | H28 | 114.5° | 145.6° |
H25 | C25 | C28 | H28A | 4.0° | 24.0° |
H25 | C25 | C24 | H24 | 126.1° | 160.9° |
H28 | C28 | C31 | H31 | 19.6° | 0.0° |
H28 | C28 | C31 | H31A | 99.4° | 121.5° |
H28A | C28 | C31 | H31 | 138.1° | 121.5° |
H28A | C28 | C31 | H31A | 19.1° | 0.0° |
H31 | C31 | C27 | H27 | 26.4° | 23.0° |
H31 | C31 | C27 | H27A | 145.6° | 145.7° |
H31A | C31 | C27 | H27 | 92.6° | 98.5° |
H31A | C31 | C27 | H27A | 26.6° | 24.3° |
H27 | C27 | C24 | H24 | 20.3° | 38.3° |
H27A | C27 | C24 | H24 | 139.5° | 160.9° |
H30 | C30 | H30A | H30B | 120.0° | 120.0° |
H29 | C29 | H29A | H29B | 120.0° | 119.9° |
H3 | C3 | C2 | H2 | 1.4° | 0.1° |
HN17 | N17 | C23 | H23 | 39.4° | 120.0° |
HN17 | N17 | C23 | H23A | 159.4° | 120.0° |
HN17 | N17 | C23 | H23B | 80.6° | 0.1° |
H23 | C23 | H23A | H23B | 120.0° | 120.1° |