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SummaryGeometryRelated PDB entries

OZO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O24P21doub1.48Å1.65Å
O22P21sing1.61Å1.47Å
P21O23sing1.61Å1.46Å
P21O20sing1.61Å1.64Å
O20B18sing1.42Å1.34Å
C02C01sing1.53Å1.54Å
C02C03sing1.53Å1.54Å
B18C03sing1.57Å1.59Å
B18O19sing1.42Å1.35Å
C03N04sing1.47Å1.46Å
N04S05sing1.66Å1.73Å
O07S05doub1.42Å1.46Å
S05C08sing1.81Å1.80Å
S05O06doub1.42Å1.46Å
C08C09sing1.51Å1.53Å
C09C10doub1.38Å1.39ÅAromatic
C09C17sing1.38Å1.39ÅAromatic
C10C11sing1.38Å1.39ÅAromatic
C17C13doub1.40Å1.38ÅAromatic
C11C12doub1.38Å1.39ÅAromatic
C13C12sing1.40Å1.39ÅAromatic
C13C14sing1.48Å1.52Å
C14O15doub1.21Å1.27Å
C14O16sing1.35Å1.27Å
C11H1sing1.08Å1.08Å
C12H2sing1.08Å1.08Å
C10H3sing1.08Å1.08Å
C17H4sing1.08Å1.08Å
C01H5sing1.09Å1.10Å
C01H6sing1.09Å1.10Å
C01H7sing1.09Å1.10Å
C02H8sing1.09Å1.10Å
C02H9sing1.09Å1.10Å
C03H10sing1.09Å1.10Å
C08H11sing1.09Å1.10Å
C08H12sing1.09Å1.10Å
N04H13sing0.97Å1.00Å
O16H14sing0.97Å0.95Å
O19H15sing0.97Å0.95Å
O22H16sing0.97Å0.95Å
O23H17sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O24P21O22110.6°109.5°
O24P21O23113.5°109.5°
O24P21O20111.7°109.5°
O22P21O23102.1°109.5°
O22P21O20108.3°109.5°
P21O22H16109.5°114.0°
O23P21O20110.2°109.4°
P21O23H17109.5°114.0°
P21O20B18131.9°114.0°
O20B18C03103.9°120.0°
O20B18O19102.2°120.0°
C01C02C03114.1°109.5°
C02C01H5109.5°109.5°
C02C01H6109.5°109.4°
C02C01H7109.5°109.5°
C01C02H8108.3°109.4°
C01C02H9108.3°109.5°
C02C03B18111.3°109.5°
C02C03N04108.1°109.5°
C03C02H8108.3°109.5°
C03C02H9108.3°109.5°
C02C03H10108.9°109.5°
C03B18O19108.7°120.0°
B18C03N04110.3°109.5°
B18C03H10108.3°109.5°
B18O19H15109.5°114.0°
C03N04S05120.0°120.0°
N04C03H10109.9°109.4°
C03N04H13106.8°120.0°
N04S05O07110.2°104.3°
N04S05C08109.2°104.5°
N04S05O06112.4°104.3°
S05N04H13106.8°120.0°
O07S05C08111.4°110.5°
O07S05O06103.1°121.0°
C08S05O06110.4°110.5°
S05C08C09110.2°109.5°
S05C08H11109.3°109.5°
S05C08H12109.3°109.5°
C08C09C10121.6°119.9°
C08C09C17118.6°119.9°
C09C08H11109.3°109.5°
C09C08H12109.3°109.4°
C10C09C17119.7°120.2°
C09C10C11119.2°120.3°
C09C10H3120.4°119.8°
C09C17C13121.0°119.8°
C09C17H4119.5°120.1°
C10C11C12120.8°120.2°
C10C11H1119.6°119.9°
C11C10H3120.4°119.9°
C17C13C12119.8°119.7°
C17C13C14119.6°120.1°
C13C17H4119.5°120.1°
C11C12C13119.5°119.8°
C12C11H1119.6°119.9°
C11C12H2120.3°120.1°
C12C13C14120.6°120.2°
C13C12H2120.2°120.0°
C13C14O15119.3°120.0°
C13C14O16119.6°120.0°
O15C14O16121.1°120.1°
C14O16H14109.5°117.0°
H5C01H6109.5°109.5°
H5C01H7109.5°109.5°
H6C01H7109.4°109.6°
H8C02H9109.5°109.5°
H11C08H12109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O24P21O22O23121.0°120.0°
O24P21O22O20122.7°120.0°
O24P21O23O20126.1°120.0°
O24P21O20B1831.6°60.0°
O24P21O22H160.0°60.0°
O24P21O23H170.0°180.0°
O22P21O23O20114.9°120.0°
O22P21O20B18153.6°180.0°
O22P21O23H17119.0°60.0°
O23P21O20B1895.5°60.0°
O23P21O22H16121.0°60.0°
P21O20B18C03146.8°180.0°
P21O20B18O19100.2°0.1°
O20P21O22H16122.7°180.0°
O20P21O23H17126.1°60.0°
O20B18C03C0255.9°60.0°
O20B18C03O19108.3°179.9°
O20B18C03N0464.2°180.0°
O20B18C03H10175.6°60.1°
O20B18O19H15180.0°0.1°
C01C02C03H8120.7°119.9°
C01C02C03H9120.7°120.0°
C01C02C03B1895.8°60.0°
C01C02C03N0425.5°180.0°
C02C01H5H6120.0°119.9°
C02C01H5H7120.0°120.0°
C02C01H6H7120.0°120.0°
C01C02H8H9117.9°120.0°
C01C02C03H10144.8°60.1°
C02C03B18N04120.0°120.0°
C02C03B18H10119.7°120.0°
C02C03B18O19164.1°119.9°
C02C03N04H10118.7°120.0°
C02C03N04S0583.6°90.0°
C03C02C01H5180.0°60.0°
C03C02C01H660.0°60.0°
C03C02C01H760.0°180.0°
C03C02H8H9117.9°120.1°
C02C03N04H13154.9°90.0°
B18C03N04H10119.3°120.0°
B18C03N04S05154.5°150.0°
B18C03C02H8143.5°59.9°
B18C03C02H924.8°180.0°
B18C03N04H1333.0°30.1°
C03B18O19H1570.6°180.0°
O19B18C03N0444.1°0.1°
O19B18C03H1076.2°120.0°
C03N04S05H13121.5°180.0°
C03N04S05O0745.7°178.9°
C03N04S05C0877.0°65.0°
C03N04S05O06160.1°51.1°
N04C03C02H895.2°60.1°
N04C03C02H9146.2°60.0°
N04S05O07C08121.4°111.8°
N04S05O07O06120.2°116.7°
N04S05C08O06124.1°111.6°
N04S05C08C09171.8°180.0°
S05N04C03H1035.2°30.0°
N04S05C08H1168.1°60.0°
N04S05C08H1251.7°60.0°
O07S05C08O06113.9°136.7°
O07S05C08C0966.2°68.4°
O07S05C08H1153.9°51.6°
O07S05C08H12173.7°171.6°
O07S05N04H13167.2°1.1°
S05C08C09H11120.1°120.1°
S05C08C09H12120.1°120.0°
S05C08C09C1063.9°90.0°
S05C08C09C17117.6°90.0°
S05C08H11H12119.7°120.0°
C08S05N04H1344.5°115.0°
O06S05C08C0947.7°68.4°
O06S05C08H11167.8°171.6°
O06S05C08H1272.4°51.6°
O06S05N04H1378.4°128.9°
C08C09C10C17178.4°180.0°
C08C09C10C11178.7°180.0°
C08C09C17C13178.8°179.7°
C08C09C10H31.3°0.0°
C08C09C17H41.2°0.2°
C09C08H11H12119.7°119.9°
C09C10C11H3180.0°180.0°
C10C09C17C130.4°0.3°
C09C10C11C120.2°0.0°
C09C10C11H1179.8°179.7°
C10C09C17H4179.6°179.8°
C10C09C08H1156.2°150.0°
C10C09C08H12176.0°30.0°
C17C09C10C110.3°0.0°
C09C17C13H4180.0°179.5°
C09C17C13C120.4°0.6°
C09C17C13C14179.3°180.0°
C17C09C10H3179.7°180.0°
C17C09C08H11122.2°30.1°
C17C09C08H122.5°150.0°
C10C11C12H1180.0°179.7°
C10C11C12C130.2°0.3°
C10C11C12H2179.8°179.8°
C17C13C12C110.3°0.6°
C17C13C12C14179.7°179.4°
C17C13C14O1518.5°0.5°
C17C13C14O16162.6°179.5°
C17C13C12H2179.7°179.5°
C11C12C13H2180.0°179.9°
C11C12C13C14179.4°180.0°
C12C11C10H3179.8°180.0°
C12C13C14O15161.2°180.0°
C12C13C14O1617.8°0.1°
C13C12C11H1179.8°180.0°
C12C13C17H4179.6°180.0°
C13C14O15O16178.9°180.0°
C14C13C12H20.6°0.1°
C14C13C17H40.7°0.5°
C13C14O16H14178.9°180.0°
O15C14O16H140.0°0.0°
H1C11C12H20.2°0.1°
H1C11C10H30.2°0.3°
H5C01H6H7120.0°120.0°
H5C01C02H859.3°60.0°
H5C01C02H959.3°180.0°
H6C01C02H860.7°179.9°
H6C01C02H9179.4°60.1°
H7C01C02H8179.3°60.0°
H7C01C02H960.7°60.0°
H8C02C03H1024.2°180.0°
H9C02C03H1094.5°59.9°
H10C03N04H1386.3°150.1°

222415

PDB entries from 2024-07-10

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