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SummaryGeometryRelated PDB entries

OYT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N11C10doub1.30Å1.34ÅAromatic
N11C04sing1.35Å1.37ÅAromatic
C10N06sing1.36Å1.33ÅAromatic
N02C01sing1.46Å1.46Å
N02C03sing1.39Å1.44Å
C04C03doub1.40Å1.42ÅAromatic
C04C05sing1.41Å1.36ÅAromatic
N06C07sing1.47Å1.46Å
N06C05sing1.37Å1.35ÅAromatic
C09C07sing1.53Å1.53Å
C09C08sing1.53Å1.53Å
C07C08sing1.53Å1.53Å
C03N14sing1.33Å1.33ÅAromatic
C05N12doub1.33Å1.36ÅAromatic
N14C13doub1.32Å1.34ÅAromatic
N12C13sing1.32Å1.33ÅAromatic
C10H1sing1.08Å1.08Å
C13H2sing1.08Å1.08Å
C01H3sing1.09Å1.10Å
C01H4sing1.09Å1.10Å
C01H5sing1.09Å1.10Å
C07H6sing1.09Å1.10Å
C08H7sing1.09Å1.10Å
C08H8sing1.09Å1.10Å
C09H9sing1.09Å1.10Å
C09H10sing1.09Å1.10Å
N02H11sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C10N11C04106.6°109.4°
N11C10N06108.8°110.0°
N11C10H1125.6°125.0°
N11C04C03134.2°134.7°
N11C04C05109.0°107.1°
C10N06C07124.2°126.3°
C10N06C05109.8°107.4°
N06C10H1125.6°125.0°
C01N02C03119.2°120.0°
N02C01H3109.5°109.6°
N02C01H4109.5°109.5°
N02C01H5109.4°109.5°
C01N02H11107.0°120.0°
N02C03C04117.6°120.7°
N02C03N14122.3°120.7°
C03N02H11107.0°120.0°
C03C04C05116.8°118.2°
C04C03N14120.1°118.5°
C04C05N06105.8°106.0°
C04C05N12121.4°119.1°
C07N06C05126.0°126.3°
N06C07C09126.3°117.5°
N06C07C08130.1°117.5°
N06C07H6111.1°115.5°
N06C05N12132.8°134.9°
C07C09C0860.1°60.0°
C09C07C0859.8°60.0°
C09C07H6110.1°117.5°
C07C09H9120.0°117.5°
C07C09H10120.0°117.5°
C09C08C0760.1°60.0°
C09C08H7120.0°117.5°
C09C08H8120.0°117.5°
C08C09H9120.0°117.5°
C08C09H10120.0°117.5°
C08C07H6110.1°117.5°
C07C08H7120.0°117.5°
C07C08H8119.9°117.5°
C03N14C13120.8°121.2°
C05N12C13119.5°120.6°
N14C13N12121.4°122.4°
N14C13H2119.3°118.8°
N12C13H2119.3°118.8°
H3C01H4109.5°109.4°
H3C01H5109.4°109.4°
H4C01H5109.5°109.4°
H7C08H8109.5°115.5°
H9C09H10109.5°115.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N11C10N06H1180.0°179.8°
C10N11C04C03179.9°179.8°
C10N11C04C051.2°0.3°
N11C10N06C07179.9°179.8°
N11C10N06C050.8°0.2°
C04N11C10N061.2°0.1°
N11C04C03N021.8°0.6°
N11C04C03C05178.8°179.4°
N11C04C05N060.7°0.5°
N11C04C03N14179.7°179.4°
N11C04C05N12179.4°179.6°
C04N11C10H1178.8°179.8°
C10N06C05C040.0°0.4°
C10N06C07C05179.3°180.0°
C10N06C07C0935.7°8.6°
C10N06C07C08114.3°60.0°
C10N06C05N12179.8°179.7°
C10N06C07H6102.1°154.3°
C01N02C03H11121.4°179.9°
C01N02C03C04179.9°179.9°
C01N02C03N141.6°0.0°
N02C01H3H4120.0°120.0°
N02C01H3H5120.0°120.1°
N02C01H4H5120.0°120.0°
N02C03C04N14178.6°180.0°
N02C03C04C05179.4°180.0°
N02C03N14C13179.8°180.0°
C03N02C01H3180.0°59.9°
C03N02C01H460.0°60.1°
C03N02C01H560.0°180.0°
C03C04C05N06179.8°180.0°
C03C04C05N120.3°0.0°
C04C03N14C131.3°0.1°
C04C03N02H1158.5°0.0°
C04C05N06C07179.4°179.6°
C04C05N06N12179.9°179.9°
C05C04C03N140.8°0.0°
C04C05N12C130.2°0.1°
N06C07C09C08119.7°107.5°
N06C07C09H6138.2°145.0°
N06C07C08H6143.9°145.1°
C07N06C05N120.5°0.3°
C07N06C10H10.1°0.1°
N06C07C08H7136.5°0.0°
N06C07C08H84.5°145.0°
N06C07C09H9130.7°145.0°
N06C07C09H1010.3°0.0°
C05N06C07C09143.5°171.3°
C05N06C07C0864.9°120.1°
N06C05N12C13179.9°180.0°
C05N06C10H1179.2°179.9°
C05N06C07H678.7°25.7°
C07C09C08H9109.5°107.4°
C07C09C08H10109.5°107.5°
C09C07C08H6102.1°107.5°
C07C09C08H7109.5°107.5°
C07C09C08H8109.5°107.4°
C07C09H9H10144.7°145.7°
C09C08H7H8144.7°145.7°
C08C09H9H10144.7°145.7°
C07C08H7H8144.6°145.6°
C03N14C13N121.2°0.1°
C03N14C13H2178.8°180.0°
N14C03N02H11123.0°180.0°
C05N12C13N140.7°0.0°
C05N12C13H2179.3°180.0°
N14C13N12H2180.0°180.0°
H3C01H4H5120.0°119.9°
H3C01N02H1158.7°120.0°
H4C01N02H1161.3°120.0°
H5C01N02H11178.6°0.1°
H6C07C08H77.4°145.1°
H6C07C08H8148.3°0.1°
H6C07C09H97.4°0.1°
H6C07C09H10148.4°144.9°
H7C08C09H90.0°145.0°
H7C08C09H10141.0°0.0°
H8C08C09H9141.0°0.0°
H8C08C09H100.0°145.1°

247536

PDB entries from 2026-01-14

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