OUD
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OD2 | CG | doub | 1.21Å | 1.21Å | |
| CM | N2 | sing | 1.47Å | 1.47Å | |
| CM | CA | sing | 1.53Å | 1.55Å | |
| N2 | C | sing | 1.35Å | 1.41Å | |
| CG | CB | sing | 1.51Å | 1.52Å | |
| CG | OD1 | sing | 1.34Å | 1.22Å | |
| CB | CA | sing | 1.53Å | 1.55Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| CA | N | sing | 1.47Å | 1.47Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | HB3 | sing | 1.09Å | 1.10Å | |
| CB | HB2 | sing | 1.09Å | 1.10Å | |
| OD1 | H4 | sing | 0.97Å | 0.95Å | |
| CM | HM3 | sing | 1.09Å | 1.10Å | |
| CM | HM2 | sing | 1.09Å | 1.10Å | |
| N2 | HN2 | sing | 0.97Å | 1.00Å | |
| C | OXT | sing | 1.35Å | 1.40Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OD2 | CG | CB | 117.5° | 120.1° |
| OD2 | CG | OD1 | 123.8° | 120.0° |
| N2 | CM | CA | 113.5° | 109.5° |
| CM | N2 | C | 120.8° | 120.0° |
| N2 | CM | HM3 | 108.5° | 109.5° |
| N2 | CM | HM2 | 108.4° | 109.5° |
| CM | N2 | HN2 | 119.6° | 120.0° |
| CM | CA | CB | 110.9° | 109.5° |
| CM | CA | N | 110.7° | 109.5° |
| CM | CA | HA | 107.8° | 109.5° |
| CA | CM | HM3 | 108.4° | 109.4° |
| CA | CM | HM2 | 108.5° | 109.5° |
| N2 | C | O | 120.4° | 120.0° |
| C | N2 | HN2 | 119.6° | 120.0° |
| N2 | C | OXT | 114.8° | 120.0° |
| CB | CG | OD1 | 118.7° | 120.0° |
| CG | CB | CA | 112.0° | 109.5° |
| CG | CB | HB3 | 108.9° | 109.5° |
| CG | CB | HB2 | 108.8° | 109.5° |
| CG | OD1 | H4 | 109.5° | 117.0° |
| CB | CA | N | 110.9° | 109.4° |
| CB | CA | HA | 107.8° | 109.5° |
| CA | CB | HB3 | 108.9° | 109.4° |
| CA | CB | HB2 | 108.8° | 109.4° |
| O | C | OXT | 120.5° | 120.0° |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.5° | 111.0° |
| N | CA | HA | 108.7° | 109.5° |
| H | N | H2 | 109.5° | 111.0° |
| HB3 | CB | HB2 | 109.5° | 109.5° |
| HM3 | CM | HM2 | 109.5° | 109.5° |
| C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OD2 | CG | CB | OD1 | 178.6° | 180.0° |
| OD2 | CG | CB | CA | 87.4° | 0.0° |
| OD2 | CG | CB | HB3 | 33.0° | 119.9° |
| OD2 | CG | CB | HB2 | 152.3° | 120.0° |
| OD2 | CG | OD1 | H4 | 0.0° | 0.0° |
| N2 | CM | CA | HM3 | 120.6° | 120.0° |
| N2 | CM | CA | HM2 | 120.6° | 120.0° |
| CM | N2 | C | HN2 | 180.0° | 179.9° |
| N2 | CM | CA | CB | 178.9° | 175.0° |
| CM | N2 | C | O | 44.9° | 0.0° |
| N2 | CM | CA | N | 57.5° | 55.0° |
| N2 | CM | CA | HA | 61.2° | 65.0° |
| N2 | CM | HM3 | HM2 | 118.2° | 120.0° |
| CM | N2 | C | OXT | 158.6° | 180.0° |
| CA | CM | N2 | C | 62.6° | 180.0° |
| CM | CA | CB | CG | 60.9° | 175.0° |
| CM | CA | CB | N | 123.4° | 120.0° |
| CM | CA | CB | HA | 117.8° | 120.0° |
| CM | CA | N | HA | 118.2° | 120.0° |
| CM | CA | N | H | 180.0° | 64.0° |
| CM | CA | N | H2 | 60.0° | 60.0° |
| CM | CA | CB | HB3 | 59.5° | 65.0° |
| CM | CA | CB | HB2 | 178.8° | 55.0° |
| CA | CM | HM3 | HM2 | 118.1° | 120.0° |
| CA | CM | N2 | HN2 | 117.4° | 0.1° |
| N2 | C | O | OXT | 155.2° | 180.0° |
| C | N2 | CM | HM3 | 176.9° | 60.0° |
| C | N2 | CM | HM2 | 58.1° | 60.0° |
| N2 | C | OXT | HXT | 156.5° | 179.9° |
| CG | CB | CA | HB3 | 120.4° | 120.0° |
| CG | CB | CA | HB2 | 120.3° | 120.0° |
| CG | CB | CA | N | 175.7° | 65.0° |
| CG | CB | CA | HA | 56.9° | 55.0° |
| CG | CB | HB3 | HB2 | 118.9° | 120.1° |
| CB | CG | OD1 | H4 | 178.5° | 180.0° |
| OD1 | CG | CB | CA | 91.2° | 180.0° |
| OD1 | CG | CB | HB3 | 148.4° | 60.0° |
| OD1 | CG | CB | HB2 | 29.1° | 60.1° |
| CB | CA | N | HA | 118.3° | 120.0° |
| CB | CA | N | H | 56.4° | 176.0° |
| CB | CA | N | H2 | 176.5° | 60.0° |
| CA | CB | HB3 | HB2 | 118.9° | 119.9° |
| CB | CA | CM | HM3 | 60.4° | 65.0° |
| CB | CA | CM | HM2 | 58.3° | 55.0° |
| O | C | N2 | HN2 | 135.1° | 179.9° |
| O | C | OXT | HXT | 0.0° | 0.1° |
| CA | N | H | H2 | 120.0° | 124.0° |
| N | CA | CB | HB3 | 63.9° | 55.0° |
| N | CA | CB | HB2 | 55.4° | 175.0° |
| N | CA | CM | HM3 | 63.1° | 175.0° |
| N | CA | CM | HM2 | 178.1° | 65.0° |
| H | N | CA | HA | 61.8° | 56.0° |
| H2 | N | CA | HA | 58.2° | 180.0° |
| HA | CA | CB | HB3 | 177.3° | 175.0° |
| HA | CA | CB | HB2 | 63.5° | 65.0° |
| HA | CA | CM | HM3 | 178.2° | 55.0° |
| HA | CA | CM | HM2 | 59.4° | 175.0° |
| HM3 | CM | N2 | HN2 | 3.2° | 119.9° |
| HM2 | CM | N2 | HN2 | 122.0° | 120.1° |
| HN2 | N2 | C | OXT | 21.4° | 0.1° |
