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Summary Geometry Related PDB entries

OOG

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C2	C3	sing	1.53Å	1.53Å
C2	C1	sing	1.51Å	1.54Å
C3	C4	sing	1.53Å	1.53Å
C4	C5	sing	1.51Å	1.53Å
C6	O4	sing	1.35Å	1.26Å
C6	O3	doub	1.21Å	1.26Å
C6	C5	sing	1.49Å	1.53Å
C5	O5	doub	1.21Å	1.32Å
C1	O1	doub	1.21Å	1.26Å
C1	O2	sing	1.34Å	1.27Å
C2	H21C	sing	1.09Å	1.10Å
C2	H22C	sing	1.09Å	1.10Å
C3	H31C	sing	1.09Å	1.10Å
C3	H32C	sing	1.09Å	1.10Å
C4	H41C	sing	1.09Å	1.10Å
C4	H42C	sing	1.09Å	1.10Å
O4	H4	sing	0.97Å	0.95Å
O2	H2	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C3	C2	C1	118.6°	109.5°
C2	C3	C4	110.0°	109.5°
C3	C2	H21C	107.2°	109.5°
C3	C2	H22C	107.1°	109.5°
C2	C3	H31C	109.3°	109.5°
C2	C3	H32C	109.3°	109.5°
C2	C1	O1	118.4°	120.0°
C2	C1	O2	124.2°	120.0°
C1	C2	H21C	107.1°	109.5°
C1	C2	H22C	107.1°	109.5°
C3	C4	C5	115.5°	109.4°
C4	C3	H31C	109.4°	109.5°
C4	C3	H32C	109.3°	109.5°
C3	C4	H41C	108.0°	109.5°
C3	C4	H42C	108.0°	109.5°
C4	C5	C6	118.5°	120.0°
C4	C5	O5	123.5°	120.0°
C5	C4	H41C	107.9°	109.5°
C5	C4	H42C	108.0°	109.5°
O4	C6	O3	117.9°	120.0°
O4	C6	C5	121.0°	120.0°
C6	O4	H4	109.5°	117.0°
O3	C6	C5	121.1°	120.0°
C6	C5	O5	105.4°	120.0°
O1	C1	O2	117.4°	120.0°
C1	O2	H2	109.5°	117.0°
H21C	C2	H22C	109.4°	109.4°
H31C	C3	H32C	109.5°	109.5°
H41C	C4	H42C	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C3	C2	C1	H21C	121.3°	120.0°
C3	C2	C1	H22C	121.3°	120.0°
C2	C3	C4	H31C	120.1°	120.0°
C2	C3	C4	H32C	120.1°	120.0°
C2	C3	C4	C5	159.8°	180.0°
C3	C2	C1	O1	150.2°	0.0°
C3	C2	C1	O2	31.5°	180.0°
C3	C2	H21C	H22C	115.8°	120.0°
C2	C3	H31C	H32C	119.8°	120.0°
C2	C3	C4	H41C	79.4°	60.0°
C2	C3	C4	H42C	38.9°	60.0°
C1	C2	C3	C4	165.0°	180.0°
C2	C1	O1	O2	178.4°	180.0°
C1	C2	H21C	H22C	115.8°	120.0°
C1	C2	C3	H31C	75.0°	60.0°
C1	C2	C3	H32C	44.9°	60.0°
C2	C1	O2	H2	178.3°	180.0°
C3	C4	C5	H41C	120.9°	120.0°
C3	C4	C5	H42C	120.9°	120.0°
C3	C4	C5	C6	102.7°	180.0°
C3	C4	C5	O5	121.2°	0.0°
C4	C3	C2	H21C	73.7°	60.0°
C4	C3	C2	H22C	43.7°	60.0°
C4	C3	H31C	H32C	119.8°	120.0°
C3	C4	H41C	H42C	117.3°	120.0°
C4	C5	C6	O4	37.4°	180.0°
C4	C5	C6	O3	142.9°	0.0°
C4	C5	C6	O5	143.1°	180.0°
C5	C4	C3	H31C	39.7°	60.0°
C5	C4	C3	H32C	80.2°	60.0°
C5	C4	H41C	H42C	117.3°	120.0°
O4	C6	O3	C5	179.7°	180.0°
O4	C6	C5	O5	179.5°	0.0°
O3	C6	C5	O5	0.2°	180.0°
O3	C6	O4	H4	0.0°	0.0°
C6	C5	C4	H41C	136.4°	60.0°
C6	C5	C4	H42C	18.2°	60.0°
C5	C6	O4	H4	179.7°	180.0°
O5	C5	C4	H41C	0.3°	120.0°
O5	C5	C4	H42C	117.9°	120.0°
O1	C1	C2	H21C	28.9°	120.0°
O1	C1	C2	H22C	88.5°	120.0°
O1	C1	O2	H2	0.0°	0.0°
O2	C1	C2	H21C	152.8°	60.0°
O2	C1	C2	H22C	89.8°	60.0°
H21C	C2	C3	H31C	46.4°	60.0°
H21C	C2	C3	H32C	166.2°	180.0°
H22C	C2	C3	H31C	163.7°	180.0°
H22C	C2	C3	H32C	76.4°	60.0°
H31C	C3	C4	H41C	160.5°	180.0°
H31C	C3	C4	H42C	81.2°	60.0°
H32C	C3	C4	H41C	40.7°	60.0°
H32C	C3	C4	H42C	158.9°	180.0°

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