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SummaryGeometryRelated PDB entries

OO1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C55C54sing1.51Å1.51Å
C54C53doub1.38Å1.39ÅAromatic
C54C56sing1.38Å1.38ÅAromatic
C53C52sing1.38Å1.39ÅAromatic
C56C57doub1.38Å1.41ÅAromatic
C52C51doub1.39Å1.38ÅAromatic
C57C51sing1.39Å1.40ÅAromatic
C51N50sing1.40Å1.44Å
N50C48sing1.35Å1.41Å
O49C48doub1.22Å1.22Å
N50H2sing0.97Å1.00Å
C52H3sing1.08Å1.08Å
C53H4sing1.08Å1.08Å
C55H5sing1.09Å1.10Å
C55H6sing1.09Å1.10Å
C55H7sing1.09Å1.10Å
C56H8sing1.08Å1.08Å
C57H9sing1.08Å1.08Å
C48O1sing1.35Å1.43Å
O1H1sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C55C54C53119.2°120.0°
C55C54C56120.0°119.9°
C54C55H5109.5°109.4°
C54C55H6109.5°109.5°
C54C55H7109.5°109.5°
C53C54C56120.8°120.1°
C54C53C52120.6°120.1°
C54C53H4119.7°120.0°
C54C56C57119.2°120.1°
C54C56H8120.4°120.0°
C53C52C51118.6°119.9°
C53C52H3120.7°120.1°
C52C53H4119.7°120.0°
C56C57C51119.1°119.9°
C57C56H8120.4°119.9°
C56C57H9120.4°120.0°
C52C51C57121.6°119.9°
C52C51N50119.8°120.0°
C51C52H3120.7°120.0°
C57C51N50118.3°120.1°
C51C57H9120.5°120.1°
C51N50C48124.5°120.0°
C51N50H2117.8°120.0°
N50C48O49122.6°120.0°
C48N50H2117.7°120.0°
N50C48O1112.7°120.0°
O49C48O1124.6°120.0°
H5C55H6109.5°109.5°
H5C55H7109.5°109.5°
H6C55H7109.5°109.5°
C48O1H1109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C55C54C53C56179.3°180.0°
C55C54C53C52180.0°180.0°
C55C54C56C57179.7°179.8°
C55C54C53H40.0°0.0°
C54C55H5H6120.0°120.0°
C54C55H5H7120.0°120.0°
C54C55H6H7120.0°120.0°
C55C54C56H80.3°0.0°
C54C53C52H4180.0°179.9°
C53C54C56C571.0°0.3°
C54C53C52C511.6°0.0°
C54C53C52H3178.4°180.0°
C53C54C55H589.7°90.0°
C53C54C55H6150.3°150.0°
C53C54C55H730.4°30.0°
C53C54C56H8179.0°180.0°
C56C54C53C520.7°0.0°
C54C56C57H8180.0°179.7°
C54C56C57C512.2°0.5°
C56C54C53H4179.3°179.9°
C56C54C55H589.6°90.0°
C56C54C55H630.4°30.0°
C56C54C55H7150.3°150.0°
C54C56C57H9177.8°180.0°
C53C52C51H3180.0°180.0°
C53C52C51C572.8°0.2°
C53C52C51N50176.5°180.0°
C56C57C51C523.1°0.5°
C56C57C51H9180.0°179.5°
C56C57C51N50176.9°179.7°
C52C51C57N50173.7°179.8°
C52C51N50C48132.6°35.1°
C52C51N50H247.4°144.9°
C51C52C53H4178.4°180.0°
C52C51C57H9176.8°180.0°
C57C51N50C4853.6°145.1°
C57C51N50H2126.4°34.8°
C57C51C52H3177.2°179.8°
C51C57C56H8177.8°179.8°
C51N50C48H2180.0°179.9°
C51N50C48O494.7°5.0°
N50C51C52H33.5°0.0°
N50C51C57H93.1°0.2°
C51N50C48O1177.3°175.4°
N50C48O49O1177.8°179.6°
N50C48O1H1178.0°179.7°
O49C48N50H2175.4°175.1°
O49C48O1H10.0°0.0°
H2N50C48O12.7°4.5°
H3C52C53H41.6°0.0°
H5C55H6H7120.0°120.0°
H8C56C57H92.2°0.2°

222415

PDB entries from 2024-07-10

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