OMX
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.44Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | CB | sing | 1.53Å | 1.56Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
CB | OC | sing | 1.43Å | 1.41Å | |
CB | CG | sing | 1.51Å | 1.51Å | |
CG | CD1 | sing | 1.38Å | 1.39Å | Aromatic |
CG | CD2 | doub | 1.38Å | 1.38Å | Aromatic |
CD1 | CE1 | doub | 1.38Å | 1.38Å | Aromatic |
CD2 | CE2 | sing | 1.38Å | 1.36Å | Aromatic |
CE1 | CZ | sing | 1.39Å | 1.38Å | Aromatic |
CE2 | CZ | doub | 1.39Å | 1.39Å | Aromatic |
CZ | OH | sing | 1.36Å | 1.41Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
OC | HC | sing | 0.97Å | 0.95Å | |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
OH | HH | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 110.3° | 109.5° |
N | CA | CB | 110.4° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.4° | 111.0° |
N | CA | HA | 107.5° | 109.4° |
C | CA | CB | 115.6° | 109.5° |
CA | C | O | 122.2° | 120.0° |
CA | C | OXT | 115.9° | 120.0° |
C | CA | HA | 106.5° | 109.4° |
CA | CB | OC | 105.5° | 109.4° |
CA | CB | CG | 107.9° | 109.5° |
CB | CA | HA | 106.1° | 109.5° |
CA | CB | HB | 108.7° | 109.5° |
O | C | OXT | 121.6° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
OC | CB | CG | 114.6° | 109.5° |
OC | CB | HB | 110.7° | 109.5° |
CB | OC | HC | 109.5° | 114.0° |
CB | CG | CD1 | 120.2° | 119.9° |
CB | CG | CD2 | 120.1° | 120.0° |
CG | CB | HB | 109.3° | 109.5° |
CD1 | CG | CD2 | 118.9° | 120.1° |
CG | CD1 | CE1 | 120.7° | 120.0° |
CG | CD1 | HD1 | 119.7° | 120.0° |
CG | CD2 | CE2 | 121.0° | 120.1° |
CG | CD2 | HD2 | 119.5° | 120.0° |
CD1 | CE1 | CZ | 118.6° | 119.9° |
CE1 | CD1 | HD1 | 119.7° | 120.0° |
CD1 | CE1 | HE1 | 120.7° | 120.0° |
CD2 | CE2 | CZ | 119.6° | 119.9° |
CE2 | CD2 | HD2 | 119.5° | 120.0° |
CD2 | CE2 | HE2 | 120.2° | 120.1° |
CE1 | CZ | CE2 | 120.7° | 119.9° |
CE1 | CZ | OH | 118.6° | 120.0° |
CZ | CE1 | HE1 | 120.7° | 120.1° |
CE2 | CZ | OH | 120.5° | 120.1° |
CZ | CE2 | HE2 | 120.2° | 120.0° |
CZ | OH | HH | 109.5° | 114.0° |
H | N | H2 | 109.5° | 111.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | CB | 126.1° | 120.1° |
N | CA | C | HA | 116.3° | 119.9° |
N | CA | CB | HA | 116.1° | 120.0° |
N | CA | C | O | 25.4° | 20.0° |
N | CA | C | OXT | 149.0° | 160.0° |
N | CA | CB | OC | 66.8° | 65.0° |
N | CA | CB | CG | 56.2° | 55.0° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | HB | 174.5° | 175.0° |
C | CA | CB | HA | 117.8° | 120.0° |
CA | C | O | OXT | 174.1° | 180.0° |
C | CA | CB | OC | 59.3° | 55.0° |
C | CA | CB | CG | 177.8° | 175.0° |
C | CA | N | H | 180.0° | 63.9° |
C | CA | N | H2 | 60.0° | 60.1° |
C | CA | CB | HB | 59.4° | 65.0° |
CA | C | OXT | HXT | 174.5° | 180.0° |
CB | CA | C | O | 100.7° | 100.0° |
CB | CA | C | OXT | 84.9° | 80.0° |
CA | CB | OC | CG | 118.5° | 120.0° |
CA | CB | OC | HB | 117.4° | 120.0° |
CA | CB | CG | HB | 118.0° | 120.0° |
CA | CB | CG | CD1 | 88.2° | 95.0° |
CA | CB | CG | CD2 | 82.0° | 84.7° |
CB | CA | N | H | 50.9° | 176.0° |
CB | CA | N | H2 | 171.0° | 60.0° |
CA | CB | OC | HC | 180.0° | 60.0° |
O | C | CA | HA | 141.7° | 139.9° |
O | C | OXT | HXT | 0.0° | 0.0° |
OXT | C | CA | HA | 32.7° | 40.0° |
OC | CB | CG | HB | 124.9° | 120.0° |
OC | CB | CG | CD1 | 28.9° | 145.0° |
OC | CB | CG | CD2 | 160.9° | 35.2° |
OC | CB | CA | HA | 177.1° | 175.0° |
CB | CG | CD1 | CD2 | 170.3° | 179.8° |
CB | CG | CD1 | CE1 | 168.9° | 180.0° |
CB | CG | CD2 | CE2 | 168.9° | 180.0° |
CG | CB | CA | HA | 60.0° | 65.0° |
CG | CB | OC | HC | 61.5° | 60.0° |
CB | CG | CD1 | HD1 | 11.1° | 0.0° |
CB | CG | CD2 | HD2 | 11.1° | 0.0° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 1.3° | 0.2° |
CG | CD1 | CE1 | CZ | 2.8° | 0.0° |
CD1 | CG | CB | HB | 153.8° | 25.0° |
CD1 | CG | CD2 | HD2 | 178.7° | 179.8° |
CG | CD1 | CE1 | HE1 | 177.2° | 180.0° |
CD2 | CG | CD1 | CE1 | 1.4° | 0.2° |
CG | CD2 | CE2 | HD2 | 180.0° | 180.0° |
CG | CD2 | CE2 | CZ | 3.0° | 0.1° |
CD2 | CG | CB | HB | 36.0° | 155.2° |
CD2 | CG | CD1 | HD1 | 178.6° | 179.7° |
CG | CD2 | CE2 | HE2 | 177.0° | 180.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 7.2° | 0.2° |
CD1 | CE1 | CZ | OH | 176.8° | 180.0° |
CD2 | CE2 | CZ | CE1 | 7.4° | 0.3° |
CD2 | CE2 | CZ | HE2 | 180.0° | 180.0° |
CD2 | CE2 | CZ | OH | 176.7° | 179.9° |
CE1 | CZ | CE2 | OH | 175.9° | 179.8° |
CZ | CE1 | CD1 | HD1 | 177.2° | 180.0° |
CE1 | CZ | CE2 | HE2 | 172.6° | 179.8° |
CE1 | CZ | OH | HH | 180.0° | 90.0° |
CZ | CE2 | CD2 | HD2 | 177.0° | 180.0° |
CE2 | CZ | CE1 | HE1 | 172.8° | 179.8° |
CE2 | CZ | OH | HH | 4.0° | 89.8° |
OH | CZ | CE1 | HE1 | 3.2° | 0.0° |
OH | CZ | CE2 | HE2 | 3.3° | 0.0° |
H | N | CA | HA | 64.3° | 56.0° |
H2 | N | CA | HA | 55.7° | 180.0° |
HA | CA | CB | HB | 58.4° | 55.0° |
HB | CB | OC | HC | 62.6° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 2.9° | 0.1° |
HD2 | CD2 | CE2 | HE2 | 3.0° | 0.0° |