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OM4

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CL4C4'sing1.74Å1.74Å
CL2C3'sing1.74Å1.73Å
C4'C3'doub1.39Å1.38ÅAromatic
C4'C5'sing1.38Å1.38ÅAromatic
C3'C2'sing1.38Å1.38ÅAromatic
C5'C6'doub1.38Å1.38ÅAromatic
C2'C1'doub1.39Å1.38ÅAromatic
C6'C1'sing1.39Å1.39ÅAromatic
C1'C1sing1.48Å1.50Å
C1C6doub1.39Å1.39ÅAromatic
C1C2sing1.39Å1.38ÅAromatic
C6C5sing1.38Å1.38ÅAromatic
C2C3doub1.38Å1.38ÅAromatic
C5C4doub1.39Å1.38ÅAromatic
C3C4sing1.39Å1.38ÅAromatic
C3CL1sing1.74Å1.73Å
C4O1sing1.36Å1.40Å
O1C7sing1.43Å1.47Å
C2H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C7H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
C7H6sing1.09Å1.10Å
C2'H7sing1.08Å1.08Å
C5'H8sing1.08Å1.08Å
C6'H9sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CL4C4'C3'119.6°119.9°
CL4C4'C5'120.8°119.9°
CL2C3'C4'120.3°119.9°
CL2C3'C2'117.9°120.0°
C3'C4'C5'119.5°120.2°
C4'C3'C2'121.9°120.1°
C4'C5'C6'119.0°120.1°
C4'C5'H8120.5°120.0°
C3'C2'C1'118.3°119.9°
C3'C2'H7120.8°120.1°
C5'C6'C1'120.5°119.9°
C6'C5'H8120.5°119.9°
C5'C6'H9119.7°120.0°
C2'C1'C6'120.7°119.8°
C2'C1'C1120.1°120.1°
C1'C2'H7120.8°120.0°
C6'C1'C1119.2°120.0°
C1'C6'H9119.8°120.1°
C1'C1C6123.3°120.1°
C1'C1C2115.6°120.0°
C6C1C2121.1°119.9°
C1C6C5119.5°119.9°
C1C6H3120.3°120.0°
C1C2C3118.9°119.9°
C1C2H1120.6°120.1°
C6C5C4119.5°120.1°
C6C5H2120.3°119.9°
C5C6H3120.3°120.1°
C2C3C4120.5°120.0°
C2C3CL1118.5°120.0°
C3C2H1120.5°120.0°
C5C4C3120.5°120.1°
C5C4O1119.4°119.9°
C4C5H2120.2°120.0°
C4C3CL1121.0°120.0°
C3C4O1120.2°119.9°
C4O1C7119.6°117.0°
O1C7H4109.5°109.4°
O1C7H5109.4°109.5°
O1C7H6109.4°109.5°
H4C7H5109.5°109.5°
H4C7H6109.5°109.5°
H5C7H6109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CL4C4'C3'CL20.5°0.1°
CL4C4'C3'C5'179.6°180.0°
CL4C4'C3'C2'179.8°180.0°
CL4C4'C5'C6'179.9°179.7°
CL4C4'C5'H80.1°0.0°
CL2C3'C4'C2'179.7°179.9°
CL2C3'C4'C5'179.9°180.0°
CL2C3'C2'C1'179.6°180.0°
CL2C3'C2'H70.3°0.0°
C3'C4'C5'C6'0.4°0.2°
C4'C3'C2'C1'0.1°0.0°
C4'C3'C2'H7180.0°179.9°
C3'C4'C5'H8179.7°179.9°
C5'C4'C3'C2'0.2°0.0°
C4'C5'C6'H8180.0°179.7°
C4'C5'C6'C1'0.2°0.5°
C4'C5'C6'H9179.8°180.0°
C3'C2'C1'H7180.0°180.0°
C3'C2'C1'C6'0.2°0.2°
C3'C2'C1'C1179.4°180.0°
C5'C6'C1'C2'0.1°0.5°
C5'C6'C1'H9180.0°179.5°
C5'C6'C1'C1179.3°179.7°
C2'C1'C6'C1179.2°179.8°
C2'C1'C1C619.0°180.0°
C2'C1'C1C2159.9°0.2°
C2'C1'C6'H9179.9°180.0°
C6'C1'C1C6161.7°0.2°
C6'C1'C1C219.3°180.0°
C6'C1'C2'H7179.8°179.8°
C1'C6'C5'H8179.8°179.8°
C1'C1C6C2178.9°179.8°
C1'C1C6C5179.8°179.8°
C1'C1C2C3179.9°179.8°
C1'C1C2H10.1°0.2°
C1'C1C6H30.2°0.3°
C1C1'C2'H70.6°0.0°
C1C1'C6'H90.7°0.2°
C1C6C5H3180.0°179.9°
C6C1C2C30.9°0.0°
C1C6C5C40.4°0.1°
C6C1C2H1179.1°180.0°
C1C6C5H2179.7°180.0°
C2C1C6C50.9°0.0°
C1C2C3H1180.0°180.0°
C1C2C3C40.4°0.0°
C1C2C3CL1179.4°180.0°
C2C1C6H3179.1°179.9°
C6C5C4H2180.0°180.0°
C6C5C4C30.2°0.1°
C6C5C4O1179.8°180.0°
C2C3C4C50.2°0.0°
C2C3C4CL1179.7°180.0°
C2C3C4O1179.8°180.0°
C5C4C3O1180.0°179.9°
C5C4C3CL1179.9°180.0°
C5C4O1C77.2°0.1°
C4C5C6H3179.7°180.0°
C3C4O1C7172.8°180.0°
C4C3C2H1179.6°180.0°
C3C4C5H2179.8°180.0°
CL1C3C4O10.1°0.1°
CL1C3C2H10.6°0.0°
O1C4C5H20.2°0.0°
C4O1C7H4180.0°60.0°
C4O1C7H560.0°180.0°
C4O1C7H660.0°59.9°
O1C7H4H5120.0°120.0°
O1C7H4H6120.0°120.0°
O1C7H5H6120.0°120.0°
H2C5C6H30.3°0.1°
H4C7H5H6120.0°120.0°
H8C5'C6'H90.2°0.3°

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PDB entries from 2024-08-07

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