Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

OKJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C3sing1.53Å1.64Å
C1H43sing1.09Å1.10Å
O1C1sing1.43Å1.49Å
O1H41sing0.97Å0.95Å
O2C2doub1.21Å1.43Å
C2C1sing1.51Å1.52Å
C3N1sing1.47Å1.53Å
C3H3sing1.09Å1.10Å
C4C3sing1.53Å1.60Å
C4C5sing1.51Å1.58Å
C4H4sing1.09Å1.10Å
C4H5sing1.09Å1.10Å
C5C10sing1.38Å1.47ÅAromatic
C6C5doub1.38Å1.45ÅAromatic
C6C7sing1.38Å1.47ÅAromatic
C6H6sing1.08Å1.08Å
C7C8doub1.39Å1.49ÅAromatic
C7H7sing1.08Å1.08Å
C8C9sing1.39Å1.43ÅAromatic
C8O3sing1.36Å1.45Å
O3H8sing0.97Å0.95Å
C9H9sing1.08Å1.08Å
C10C9doub1.38Å1.42ÅAromatic
C10H10sing1.08Å1.08Å
N1H11sing1.01Å1.00Å
N1H12sing1.01Å1.00Å
C2H42sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C1H43106.8°109.5°
C3C1O1105.2°109.5°
C3C1C2118.2°109.5°
C1C3N1113.3°109.5°
C1C3H3105.1°109.5°
C1C3C4109.4°109.5°
H43C1O1115.3°109.5°
H43C1C2101.5°109.4°
C1O1H41109.5°114.0°
O1C1C2110.2°109.5°
O2C2C1125.3°120.0°
O2C2H42117.3°120.0°
C1C2H42117.3°120.0°
N1C3H3111.2°109.4°
N1C3C4103.1°109.5°
C3N1H11109.5°111.0°
C3N1H12109.5°111.0°
H3C3C4115.0°109.5°
C3C4C5112.1°109.5°
C3C4H4108.6°109.5°
C3C4H5108.6°109.5°
C5C4H4108.6°109.5°
C5C4H5108.6°109.4°
C4C5C10121.1°119.9°
C4C5C6120.2°120.0°
H4C4H5110.3°109.5°
C10C5C6118.4°120.1°
C5C10C9122.6°120.1°
C5C10H10118.7°120.0°
C5C6C7119.9°120.1°
C5C6H6120.1°119.9°
C7C6H6120.0°120.0°
C6C7C8119.3°119.9°
C6C7H7120.4°120.0°
C8C7H7120.3°120.1°
C7C8C9120.0°119.9°
C7C8O3121.0°120.0°
C9C8O3119.0°120.0°
C8C9H9120.2°120.1°
C8C9C10119.6°119.9°
C8O3H8109.5°114.0°
H9C9C10120.2°120.0°
C9C10H10118.7°120.0°
H11N1H12109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C1H43O1116.5°120.0°
C3C1H43C2124.4°120.0°
C3C1O1C2128.5°120.0°
C3C1O1H41134.7°60.0°
C3C1C2O2135.0°120.0°
C1C3N1H3118.2°120.0°
C1C3N1C4118.1°120.0°
C1C3H3C4120.3°120.1°
C1C3C4C5170.2°175.0°
C1C3C4H469.8°65.0°
C1C3C4H550.2°55.0°
C1C3N1H11180.0°64.0°
C1C3N1H1260.0°60.0°
C3C1C2H4245.0°60.0°
H43C1O1C2114.1°120.0°
H43C1O1H41107.9°180.0°
H43C1C2O2108.6°120.0°
H43C1C3N127.6°60.0°
H43C1C3H3149.2°179.9°
H43C1C3C486.8°60.0°
H43C1C2H4271.3°60.0°
O1C1C2O214.0°0.0°
O1C1C3N1150.6°180.0°
O1C1C3H387.7°60.1°
O1C1C3C436.3°60.0°
O1C1C2H42166.0°180.0°
H41O1C1C26.2°60.0°
O2C2C1H42180.0°180.0°
C2C1C3N185.9°60.0°
C2C1C3H335.8°59.9°
C2C1C3C4159.8°180.0°
N1C3H3C4116.7°120.0°
N1C3C4C569.0°65.0°
N1C3C4H451.0°55.0°
N1C3C4H5171.0°175.0°
C3N1H11H12120.0°123.9°
H3C3C4C552.2°54.9°
H3C3C4H4172.2°175.0°
H3C3C4H567.8°65.0°
H3C3N1H1161.8°56.0°
H3C3N1H1258.2°180.0°
C3C4C5H4120.0°120.1°
C3C4C5H5120.0°120.0°
C3C4H4H5118.9°120.0°
C3C4C5C100.8°90.1°
C3C4C5C6176.1°89.7°
C4C3N1H1161.9°176.0°
C4C3N1H12178.1°60.0°
C5C4H4H5118.9°120.0°
C4C5C10C6175.3°179.8°
C4C5C6C7177.6°180.0°
C4C5C6H62.4°0.0°
C4C5C10C9178.9°179.8°
C4C5C10H101.1°0.1°
H4C4C5C10120.8°30.0°
H4C4C5C664.0°150.2°
H5C4C5C10119.2°150.0°
H5C4C5C656.1°30.3°
C10C5C6C72.3°0.2°
C10C5C6H6177.7°179.8°
C5C10C9C84.7°0.4°
C5C10C9H9175.3°179.8°
C5C10C9H10180.0°179.8°
C5C6C7H6180.0°180.0°
C5C6C7C82.0°0.0°
C5C6C7H7178.0°180.0°
C6C5C10C95.8°0.5°
C6C5C10H10174.2°179.7°
C6C7C8H7180.0°180.0°
C6C7C8C93.1°0.0°
C6C7C8O3173.7°180.0°
H6C6C7C8178.0°180.0°
H6C6C7H72.0°0.0°
C7C8C9O3176.8°180.0°
C7C8O3H8180.0°90.0°
C7C8C9H9179.8°180.0°
C7C8C9C100.2°0.2°
H7C7C8C9176.9°180.0°
H7C7C8O36.3°0.1°
C9C8O3H83.2°90.0°
C8C9H9C10180.0°179.8°
C8C9C10H10175.3°179.7°
O3C8C9H93.0°0.0°
O3C8C9C10177.0°179.8°
H9C9C10H104.7°0.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon