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OKG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2O1sing1.26Å1.44Å
O1C2sing1.34Å1.35Å
O5C2doub1.21Å1.53Å
C2C3sing1.51Å1.51Å
C3C4sing1.53Å1.53Å
C4C5sing1.51Å1.52Å
C5O3doub1.21Å1.25Å
C5O4sing1.34Å1.24Å
O4H1sing0.97Å0.95Å
C4H2sing1.09Å1.10Å
C4H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2O1C2118.1°117.0°
O1C2O5117.3°120.0°
O1C2C3122.7°120.0°
O5C2C3120.0°120.0°
C2C3C4111.5°109.5°
C2C3H4109.0°109.5°
C2C3H5109.0°109.5°
C3C4C5111.2°109.5°
C3C4H2109.0°109.4°
C3C4H3109.0°109.4°
C4C3H4109.0°109.5°
C4C3H5109.0°109.5°
C4C5O3119.6°120.0°
C4C5O4118.8°120.0°
C5C4H2109.1°109.5°
C5C4H3109.0°109.5°
O3C5O4121.7°120.0°
C5O4H1109.5°117.0°
H2C4H3109.5°109.5°
H4C3H5109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2O1C2O56.1°0.0°
O2O1C2C3172.8°180.0°
O1C2O5C3178.9°180.0°
O1C2C3C4166.6°180.0°
O1C2C3H446.3°60.0°
O1C2C3H573.1°60.0°
O5C2C3C414.5°0.0°
O5C2C3H4134.8°120.0°
O5C2C3H5105.8°120.0°
C2C3C4H4120.3°120.0°
C2C3C4H5120.3°120.0°
C2C3C4C5174.8°180.0°
C2C3C4H254.5°60.0°
C2C3C4H365.0°60.0°
C2C3H4H5119.1°120.0°
C3C4C5H2120.2°120.0°
C3C4C5H3120.3°120.0°
C3C4C5O3160.3°0.0°
C3C4C5O420.2°180.0°
C3C4H2H3119.2°120.0°
C4C3H4H5119.1°120.0°
C4C5O3O4179.4°180.0°
C4C5O4H1179.4°180.0°
C5C4H2H3119.2°120.1°
C5C4C3H464.9°60.0°
C5C4C3H554.5°60.0°
O3C5O4H10.0°0.0°
O3C5C4H279.5°120.0°
O3C5C4H340.0°120.0°
O4C5C4H2100.0°60.0°
O4C5C4H3140.5°60.0°
H2C4C3H4174.8°180.0°
H2C4C3H565.8°60.0°
H3C4C3H455.3°60.0°
H3C4C3H5174.7°180.0°

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PDB entries from 2026-02-04

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