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SummaryGeometryRelated PDB entries

OKE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O09C08sing1.43Å1.35Å
C08C07sing1.51Å1.52Å
C06C07doub1.38Å1.41ÅAromatic
C06C05sing1.38Å1.37ÅAromatic
C07C10sing1.39Å1.36ÅAromatic
C05C04doub1.38Å1.41ÅAromatic
C10O11sing1.36Å1.41Å
C10C03doub1.39Å1.37ÅAromatic
C04C03sing1.39Å1.41ÅAromatic
C03O02sing1.36Å1.41Å
O02C01sing1.43Å1.43Å
C01H013sing1.09Å1.10Å
C01H011sing1.09Å1.10Å
C01H012sing1.09Å1.10Å
C04H041sing1.08Å1.08Å
C05H051sing1.08Å1.08Å
C06H061sing1.08Å1.08Å
C08H082sing1.09Å1.10Å
C08H081sing1.09Å1.10Å
O09H091sing0.97Å0.95Å
O11H111sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O09C08C07108.5°109.5°
O09C08H082109.7°109.5°
O09C08H081109.7°109.4°
C08O09H091109.5°114.0°
C08C07C06123.1°120.0°
C08C07C10117.3°120.0°
C07C08H082109.7°109.5°
C07C08H081109.7°109.4°
C07C06C05119.2°120.2°
C06C07C10119.7°120.0°
C07C06H061120.4°119.9°
C06C05C04120.9°120.2°
C06C05H051119.6°119.9°
C05C06H061120.4°120.0°
C07C10O11120.6°120.0°
C07C10C03122.3°119.9°
C05C04C03118.7°120.0°
C05C04H041120.6°120.0°
C04C05H051119.6°119.9°
O11C10C03116.9°120.1°
C10O11H111109.5°114.0°
C10C03C04119.1°119.9°
C10C03O02115.2°120.1°
C04C03O02125.7°120.1°
C03C04H041120.6°120.0°
C03O02C01117.8°117.0°
O02C01H013109.5°109.5°
O02C01H011109.5°109.5°
O02C01H012109.5°109.5°
H013C01H011109.5°109.4°
H013C01H012109.5°109.5°
H011C01H012109.4°109.4°
H082C08H081109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O09C08C07H082119.9°120.1°
O09C08C07H081119.8°120.0°
O09C08C07C062.0°0.1°
O09C08C07C10179.7°179.4°
O09C08H082H081120.5°120.0°
C08C07C06C10178.2°179.4°
C08C07C06C05179.3°180.0°
C08C07C10O112.2°0.2°
C08C07C10C03179.1°180.0°
C08C07C06H0610.7°0.5°
C07C08H082H081120.5°120.0°
C07C08O09H091180.0°180.0°
C07C06C05H061180.0°179.5°
C07C06C05C041.9°0.2°
C06C07C10O11179.5°179.7°
C06C07C10C032.6°0.5°
C07C06C05H051178.0°179.7°
C06C07C08H082121.9°120.0°
C06C07C08H081117.8°120.0°
C05C06C07C102.5°0.5°
C06C05C04H051180.0°180.0°
C06C05C04C031.5°0.1°
C06C05C04H041178.5°180.0°
C07C10O11C03177.0°179.8°
C07C10C03C042.2°0.2°
C07C10C03O02178.4°179.8°
C10C07C06H061177.6°180.0°
C10C07C08H08259.9°60.6°
C10C07C08H08160.5°59.4°
C07C10O11H111180.0°90.2°
C05C04C03C101.5°0.0°
C05C04C03H041180.0°179.9°
C05C04C03O02179.0°180.0°
C04C05C06H061178.1°179.7°
O11C10C03C04179.1°180.0°
O11C10C03O021.4°0.0°
C10C03C04O02179.4°180.0°
C10C03O02C01169.2°180.0°
C10C03C04H041178.5°180.0°
C03C10O11H1112.9°90.0°
C04C03O02C0111.3°0.0°
C03C04C05H051178.5°180.0°
C03O02C01H013180.0°180.0°
C03O02C01H01160.0°60.0°
C03O02C01H01260.0°60.0°
O02C03C04H0410.9°0.0°
O02C01H013H011120.0°120.0°
O02C01H013H012120.0°120.1°
O02C01H011H012120.0°120.0°
H013C01H011H012120.0°120.0°
H041C04C05H0511.5°0.1°
H051C05C06H0611.9°0.2°
H082C08O09H09160.2°60.0°
H081C08O09H09160.1°60.0°

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PDB entries from 2024-07-10

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