OJY
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C11 | C12 | sing | 1.51Å | 1.53Å | |
C11 | C10 | sing | 1.53Å | 1.53Å | |
C14 | C17 | sing | 1.51Å | 1.52Å | |
C14 | N13 | sing | 1.37Å | 1.36Å | Aromatic |
C14 | C15 | doub | 1.35Å | 1.40Å | Aromatic |
C10 | C09 | sing | 1.53Å | 1.53Å | |
C12 | N13 | sing | 1.35Å | 1.33Å | Aromatic |
C12 | N16 | doub | 1.31Å | 1.34Å | Aromatic |
C17 | O18 | sing | 1.43Å | 1.41Å | |
C15 | N16 | sing | 1.34Å | 1.34Å | Aromatic |
C06 | O07 | doub | 1.21Å | 1.21Å | |
C06 | C08 | sing | 1.51Å | 1.53Å | |
C08 | N19 | sing | 1.47Å | 1.46Å | |
C08 | C09 | sing | 1.53Å | 1.54Å | |
C11 | H1 | sing | 1.09Å | 1.10Å | |
C11 | H2 | sing | 1.09Å | 1.10Å | |
C10 | H3 | sing | 1.09Å | 1.10Å | |
C10 | H4 | sing | 1.09Å | 1.10Å | |
C17 | H5 | sing | 1.09Å | 1.10Å | |
C17 | H6 | sing | 1.09Å | 1.10Å | |
C15 | H7 | sing | 1.08Å | 1.08Å | |
C08 | H17 | sing | 1.09Å | 1.10Å | |
C09 | H18 | sing | 1.09Å | 1.10Å | |
C09 | H19 | sing | 1.09Å | 1.10Å | |
N13 | H20 | sing | 0.97Å | 1.00Å | |
O18 | H22 | sing | 0.97Å | 0.95Å | |
N19 | H23 | sing | 1.01Å | 1.00Å | |
C06 | OXT | sing | 1.34Å | 1.44Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
N19 | H8 | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C12 | C11 | C10 | 116.4° | 109.4° |
C11 | C12 | N13 | 124.9° | 125.6° |
C11 | C12 | N16 | 124.9° | 125.7° |
C12 | C11 | H1 | 107.7° | 109.5° |
C12 | C11 | H2 | 107.7° | 109.4° |
C11 | C10 | C09 | 110.2° | 109.4° |
C10 | C11 | H1 | 107.7° | 109.5° |
C10 | C11 | H2 | 107.7° | 109.5° |
C11 | C10 | H3 | 109.3° | 109.5° |
C11 | C10 | H4 | 109.3° | 109.5° |
C17 | C14 | N13 | 125.6° | 126.6° |
C17 | C14 | C15 | 128.3° | 126.6° |
C14 | C17 | O18 | 111.3° | 109.5° |
C14 | C17 | H5 | 109.0° | 109.5° |
C14 | C17 | H6 | 109.0° | 109.5° |
N13 | C14 | C15 | 106.1° | 106.8° |
C14 | N13 | C12 | 108.4° | 107.2° |
C14 | N13 | H20 | 125.8° | 126.4° |
C14 | C15 | N16 | 107.8° | 108.0° |
C14 | C15 | H7 | 126.1° | 126.0° |
C10 | C09 | C08 | 112.3° | 109.4° |
C09 | C10 | H3 | 109.3° | 109.5° |
C09 | C10 | H4 | 109.3° | 109.5° |
C10 | C09 | H18 | 108.8° | 109.5° |
C10 | C09 | H19 | 108.8° | 109.5° |
N13 | C12 | N16 | 110.1° | 108.7° |
C12 | N13 | H20 | 125.8° | 126.4° |
C12 | N16 | C15 | 107.5° | 109.2° |
O18 | C17 | H5 | 109.0° | 109.5° |
O18 | C17 | H6 | 109.0° | 109.4° |
C17 | O18 | H22 | 109.5° | 114.0° |
N16 | C15 | H7 | 126.1° | 126.0° |
O07 | C06 | C08 | 118.0° | 120.0° |
O07 | C06 | OXT | 121.9° | 120.0° |
C06 | C08 | N19 | 112.3° | 109.5° |
C06 | C08 | C09 | 109.8° | 109.4° |
C06 | C08 | H17 | 108.9° | 109.4° |
C08 | C06 | OXT | 120.1° | 120.0° |
N19 | C08 | C09 | 107.2° | 109.5° |
N19 | C08 | H17 | 109.8° | 109.5° |
C08 | N19 | H23 | 109.5° | 111.0° |
C08 | N19 | H8 | 109.5° | 111.0° |
C09 | C08 | H17 | 108.8° | 109.5° |
C08 | C09 | H18 | 108.7° | 109.4° |
C08 | C09 | H19 | 108.8° | 109.4° |
H1 | C11 | H2 | 109.5° | 109.5° |
H3 | C10 | H4 | 109.4° | 109.5° |
H5 | C17 | H6 | 109.5° | 109.5° |
H18 | C09 | H19 | 109.5° | 109.5° |
H23 | N19 | H8 | 109.5° | 111.0° |
C06 | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C12 | C11 | C10 | H1 | 121.0° | 120.0° |
C12 | C11 | C10 | H2 | 121.0° | 119.9° |
C11 | C12 | N13 | C14 | 177.5° | 180.0° |
C12 | C11 | C10 | C09 | 78.9° | 180.0° |
C11 | C12 | N13 | N16 | 177.3° | 179.8° |
C11 | C12 | N16 | C15 | 178.4° | 179.8° |
C12 | C11 | H1 | H2 | 116.8° | 120.0° |
C12 | C11 | C10 | H3 | 41.2° | 60.0° |
C12 | C11 | C10 | H4 | 161.0° | 60.0° |
C11 | C12 | N13 | H20 | 2.5° | 0.0° |
C11 | C10 | C09 | H3 | 120.1° | 120.0° |
C11 | C10 | C09 | H4 | 120.1° | 120.0° |
C10 | C11 | C12 | N13 | 78.9° | 125.0° |
C10 | C11 | C12 | N16 | 104.2° | 55.2° |
C11 | C10 | C09 | C08 | 177.7° | 180.0° |
C10 | C11 | H1 | H2 | 116.9° | 120.0° |
C11 | C10 | H3 | H4 | 119.7° | 120.0° |
C11 | C10 | C09 | H18 | 57.3° | 60.1° |
C11 | C10 | C09 | H19 | 61.9° | 60.0° |
C17 | C14 | N13 | C15 | 177.8° | 179.7° |
C17 | C14 | N13 | C12 | 177.0° | 180.0° |
C14 | C17 | O18 | H5 | 120.3° | 120.0° |
C14 | C17 | O18 | H6 | 120.3° | 120.0° |
C17 | C14 | C15 | N16 | 176.3° | 180.0° |
C14 | C17 | H5 | H6 | 119.2° | 120.1° |
C17 | C14 | C15 | H7 | 3.7° | 0.1° |
C17 | C14 | N13 | H20 | 3.0° | 0.0° |
C14 | C17 | O18 | H22 | 180.0° | 179.9° |
C14 | N13 | C12 | H20 | 180.0° | 180.0° |
C14 | N13 | C12 | N16 | 0.2° | 0.2° |
N13 | C14 | C17 | O18 | 175.6° | 179.9° |
N13 | C14 | C15 | N16 | 1.5° | 0.3° |
N13 | C14 | C17 | H5 | 64.2° | 60.1° |
N13 | C14 | C17 | H6 | 55.3° | 60.0° |
N13 | C14 | C15 | H7 | 178.6° | 179.8° |
C15 | C14 | N13 | C12 | 0.8° | 0.3° |
C14 | C15 | N16 | C12 | 1.6° | 0.1° |
C15 | C14 | C17 | O18 | 7.1° | 0.3° |
C14 | C15 | N16 | H7 | 180.0° | 180.0° |
C15 | C14 | C17 | H5 | 113.2° | 120.3° |
C15 | C14 | C17 | H6 | 127.4° | 119.7° |
C15 | C14 | N13 | H20 | 179.2° | 179.7° |
C10 | C09 | C08 | C06 | 48.9° | 175.0° |
C10 | C09 | C08 | N19 | 171.2° | 65.0° |
C10 | C09 | C08 | H18 | 120.4° | 120.0° |
C10 | C09 | C08 | H19 | 120.4° | 120.0° |
C09 | C10 | C11 | H1 | 160.1° | 60.0° |
C09 | C10 | C11 | H2 | 42.1° | 60.1° |
C09 | C10 | H3 | H4 | 119.6° | 120.0° |
C10 | C09 | C08 | H17 | 70.2° | 55.0° |
C10 | C09 | H18 | H19 | 118.8° | 120.1° |
N13 | C12 | N16 | C15 | 1.1° | 0.0° |
N13 | C12 | C11 | H1 | 42.1° | 5.0° |
N13 | C12 | C11 | H2 | 160.1° | 115.0° |
N16 | C12 | C11 | H1 | 134.8° | 175.2° |
N16 | C12 | C11 | H2 | 16.8° | 64.7° |
C12 | N16 | C15 | H7 | 178.4° | 179.9° |
N16 | C12 | N13 | H20 | 179.8° | 179.8° |
O18 | C17 | H5 | H6 | 119.1° | 119.9° |
O07 | C06 | C08 | OXT | 179.7° | 179.9° |
O07 | C06 | C08 | N19 | 153.6° | 19.9° |
O07 | C06 | C08 | C09 | 87.2° | 100.1° |
O07 | C06 | C08 | H17 | 31.8° | 140.0° |
O07 | C06 | OXT | HXT | 0.0° | 0.1° |
C06 | C08 | N19 | C09 | 120.7° | 120.0° |
C06 | C08 | N19 | H17 | 121.3° | 120.0° |
C06 | C08 | C09 | H17 | 119.1° | 119.9° |
C06 | C08 | C09 | H18 | 71.5° | 55.0° |
C06 | C08 | C09 | H19 | 169.4° | 65.0° |
C06 | C08 | N19 | H23 | 180.0° | 60.0° |
C08 | C06 | OXT | HXT | 179.7° | 180.0° |
C06 | C08 | N19 | H8 | 60.0° | 176.0° |
N19 | C08 | C09 | H17 | 118.7° | 120.1° |
N19 | C08 | C09 | H18 | 50.7° | 175.0° |
N19 | C08 | C09 | H19 | 68.4° | 55.0° |
C08 | N19 | H23 | H8 | 120.0° | 124.0° |
N19 | C08 | C06 | OXT | 26.7° | 160.0° |
C08 | C09 | C10 | H3 | 62.2° | 60.0° |
C08 | C09 | C10 | H4 | 57.6° | 60.0° |
C08 | C09 | H18 | H19 | 118.7° | 120.0° |
C09 | C08 | N19 | H23 | 59.3° | 60.0° |
C09 | C08 | C06 | OXT | 92.5° | 80.0° |
C09 | C08 | N19 | H8 | 179.3° | 64.0° |
H1 | C11 | C10 | H3 | 79.8° | 60.0° |
H1 | C11 | C10 | H4 | 40.0° | 180.0° |
H2 | C11 | C10 | H3 | 162.3° | 179.9° |
H2 | C11 | C10 | H4 | 78.0° | 59.9° |
H3 | C10 | C09 | H18 | 177.4° | 179.9° |
H3 | C10 | C09 | H19 | 58.3° | 60.0° |
H4 | C10 | C09 | H18 | 62.8° | 59.9° |
H4 | C10 | C09 | H19 | 178.0° | 180.0° |
H5 | C17 | O18 | H22 | 59.7° | 59.9° |
H6 | C17 | O18 | H22 | 59.7° | 60.0° |
H17 | C08 | C09 | H18 | 169.4° | 64.9° |
H17 | C08 | C09 | H19 | 50.3° | 175.1° |
H17 | C08 | N19 | H23 | 58.7° | 180.0° |
H17 | C08 | C06 | OXT | 148.5° | 39.9° |
H17 | C08 | N19 | H8 | 61.3° | 56.1° |