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OJP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N9CBsing1.37Å1.38ÅAromatic
N9C1sing1.35Å1.34ÅAromatic
CBCAdoub1.35Å1.39ÅAromatic
C6C7sing1.53Å1.52Å
C6C5sing1.53Å1.52Å
C7C8sing1.53Å1.51Å
C1C5sing1.51Å1.49Å
C1Ndoub1.31Å1.34ÅAromatic
CANsing1.34Å1.39ÅAromatic
CACsing1.51Å1.47Å
OCsing1.43Å1.43Å
N10C8sing1.46Å1.44Å
N10C4sing1.35Å1.38Å
C3C4sing1.47Å1.47Å
C3C2doub1.33Å1.33Å
C4O11doub1.22Å1.21Å
CBH1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C2H3sing1.08Å1.08Å
C3H4sing1.08Å1.08Å
CH5sing1.09Å1.10Å
CH6sing1.09Å1.10Å
C5H7sing1.09Å1.10Å
C5H8sing1.09Å1.10Å
C6H9sing1.09Å1.10Å
C6H10sing1.09Å1.10Å
C7H11sing1.09Å1.10Å
C7H12sing1.09Å1.10Å
C8H13sing1.09Å1.10Å
C8H14sing1.09Å1.10Å
N9H15sing0.97Å1.00Å
N10H17sing0.97Å1.00Å
OH18sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CBN9C1108.7°107.2°
N9CBCA108.9°106.8°
N9CBH1125.6°126.6°
CBN9H15125.7°126.4°
N9C1C5127.8°125.6°
N9C1N107.1°108.7°
C1N9H15125.6°126.4°
CBCAN103.2°108.0°
CBCAC131.7°126.0°
CACBH1125.6°126.6°
C7C6C5112.8°109.5°
C6C7C8115.1°109.5°
C7C6H9108.6°109.5°
C7C6H10108.7°109.4°
C6C7H11108.1°109.5°
C6C7H12108.0°109.4°
C6C5C1114.9°109.5°
C6C5H7108.1°109.5°
C6C5H8108.1°109.5°
C5C6H9108.7°109.5°
C5C6H10108.6°109.4°
C7C8N10113.7°109.5°
C8C7H11108.1°109.5°
C8C7H12108.0°109.5°
C7C8H13108.4°109.5°
C7C8H14108.4°109.5°
C5C1N125.1°125.7°
C1C5H7108.1°109.5°
C1C5H8108.1°109.5°
C1NCA112.1°109.3°
NCAC125.2°126.0°
CACO111.0°109.5°
CACH5109.1°109.4°
CACH6109.1°109.5°
OCH5109.1°109.5°
OCH6109.1°109.5°
COH18109.5°114.0°
C8N10C4120.9°120.0°
N10C8H13108.4°109.4°
N10C8H14108.4°109.5°
C8N10H17119.6°120.0°
N10C4C3114.1°120.0°
N10C4O11123.8°120.0°
C4N10H17119.6°120.0°
C4C3C2115.2°120.0°
C3C4O11122.1°120.0°
C4C3H4122.4°120.1°
C3C2H2120.0°120.0°
C3C2H3120.0°120.0°
C2C3H4122.4°119.9°
H2C2H3120.0°120.0°
H5CH6109.5°109.5°
H7C5H8109.4°109.4°
H9C6H10109.5°109.5°
H11C7H12109.5°109.5°
H13C8H14109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CBN9C1H15180.0°180.0°
N9CBCAH1180.0°179.7°
CBN9C1C5179.7°179.9°
CBN9C1N0.4°0.2°
N9CBCAN1.0°0.3°
N9CBCAC178.8°179.8°
C1N9CBCA0.9°0.0°
N9C1C5C638.6°124.6°
N9C1C5N179.3°179.6°
N9C1NCA0.3°0.4°
C1N9CBH1179.1°179.7°
N9C1C5H782.2°115.4°
N9C1C5H8159.4°4.6°
CBCANC10.8°0.4°
CBCANC179.9°179.9°
CBCACO7.9°0.1°
CBCACH5112.3°120.0°
CBCACH6128.1°120.0°
CACBN9H15179.1°180.0°
C7C6C5H9120.5°120.0°
C7C6C5H10120.5°120.0°
C6C7C8H11120.8°120.0°
C6C7C8H12120.8°119.9°
C7C6C5C1179.4°180.0°
C6C7C8N1064.7°180.0°
C7C6C5H759.8°60.0°
C7C6C5H858.6°60.0°
C7C6H9H10118.5°120.0°
C6C7H11H12117.5°119.9°
C6C7C8H1356.0°60.0°
C6C7C8H14174.7°60.0°
C5C6C7C869.0°180.0°
C6C5C1H7120.8°120.0°
C6C5C1H8120.8°120.0°
C6C5C1N142.1°55.0°
C6C5H7H8117.5°120.0°
C5C6H9H10118.5°120.0°
C5C6C7H1151.8°60.0°
C5C6C7H12170.2°60.0°
C7C8N10H13120.6°119.9°
C7C8N10H14120.6°120.0°
C7C8N10C4119.3°180.0°
C8C7C6H951.5°60.0°
C8C7C6H10170.5°60.0°
C8C7H11H12117.4°120.1°
C7C8H13H14118.1°120.0°
C7C8N10H1760.7°0.0°
C5C1NCA179.1°179.9°
C1C5H7H8117.5°120.0°
C1C5C6H958.9°60.0°
C1C5C6H1060.1°60.0°
C5C1N9H150.3°0.1°
C1NCAC179.0°179.6°
NC1C5H797.1°65.0°
NC1C5H821.3°175.1°
NC1N9H15179.7°179.8°
NCACO172.3°180.0°
NCACBH1179.0°180.0°
NCACH567.5°60.0°
NCACH652.1°60.0°
CACOH5120.2°120.0°
CACOH6120.2°120.0°
CCACBH11.1°0.1°
CACH5H6119.3°120.0°
CACOH18180.0°180.0°
OCH5H6119.3°120.0°
C8N10C4H17180.0°180.0°
C8N10C4C3177.2°180.0°
C8N10C4O113.5°0.1°
N10C8C7H11174.5°60.0°
N10C8C7H1256.1°60.0°
N10C8H13H14118.1°120.0°
N10C4C3O11179.3°179.9°
N10C4C3C2138.3°180.0°
N10C4C3H441.7°0.0°
C4N10C8H131.3°60.1°
C4N10C8H14120.1°60.0°
C4C3C2H4180.0°180.0°
C4C3C2H20.0°0.0°
C4C3C2H3180.0°179.9°
C3C4N10H172.8°0.0°
C2C3C4O1142.4°0.1°
C3C2H2H3180.0°179.9°
O11C4C3H4137.6°180.0°
O11C4N10H17176.4°179.9°
H1CBN9H150.8°0.3°
H2C2C3H4180.0°180.0°
H3C2C3H40.0°0.0°
H5COH1859.8°60.0°
H6COH1859.8°60.0°
H7C5C6H9179.7°180.0°
H7C5C6H1060.7°60.0°
H8C5C6H961.9°60.1°
H8C5C6H10179.1°180.0°
H9C6C7H11172.3°180.0°
H9C6C7H1269.3°60.0°
H10C6C7H1168.7°60.0°
H10C6C7H1249.7°180.0°
H11C7C8H1364.9°179.9°
H11C7C8H1453.8°60.0°
H12C7C8H13176.8°59.9°
H12C7C8H1464.5°179.9°
H13C8N10H17178.7°119.9°
H14C8N10H1759.9°120.0°

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PDB entries from 2024-07-17

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