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OJD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O01C02doub1.21Å1.24Å
C02C03sing1.51Å1.51Å
C02N14sing1.34Å1.45Å
C03C04sing1.55Å1.45Å
C04C05sing1.53Å1.54Å
C04C13sing1.54Å1.52Å
C05C06sing1.53Å1.47Å
C06C07sing1.51Å1.51Å
C07C08sing1.38Å1.40ÅAromatic
C07C12doub1.38Å1.44ÅAromatic
C08C09doub1.38Å1.39ÅAromatic
C09C10sing1.38Å1.41ÅAromatic
C10C11doub1.38Å1.44ÅAromatic
C11C12sing1.38Å1.34ÅAromatic
C13N14sing1.47Å1.43Å
C03H031sing1.09Å1.10Å
C03H032sing1.09Å1.10Å
N14H14sing0.97Å1.00Å
C04H04sing1.09Å1.10Å
C05H051sing1.09Å1.10Å
C05H052sing1.09Å1.10Å
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C06H061sing1.09Å1.10Å
C06H062sing1.09Å1.10Å
C08H08sing1.08Å1.08Å
C12H12sing1.08Å1.08Å
C09H09sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C11H11sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O01C02C03125.0°124.9°
O01C02N14126.9°125.0°
C03C02N14108.1°110.1°
C02C03C04102.9°104.2°
C02C03H031111.1°110.5°
C02C03H032111.1°110.4°
C02N14C13107.8°111.3°
C02N14H14126.1°124.3°
C03C04C05108.5°110.9°
C03C04C13104.5°101.8°
C04C03H031111.1°110.5°
C04C03H032111.1°110.5°
C03C04H04112.0°111.0°
C05C04C13110.0°110.9°
C04C05C06114.8°109.5°
C05C04H04110.7°110.9°
C04C05H051108.1°109.5°
C04C05H052108.1°109.5°
C04C13N14104.8°105.5°
C13C04H04110.9°111.0°
C04C13H131110.6°110.2°
C04C13H132110.6°110.3°
C05C06C07114.9°109.5°
C06C05H051108.1°109.5°
C06C05H052108.1°109.5°
C05C06H061108.1°109.5°
C05C06H062108.1°109.5°
C06C07C08119.5°120.0°
C06C07C12118.6°120.0°
C07C06H061108.1°109.5°
C07C06H062108.1°109.5°
C08C07C12121.9°120.0°
C07C08C09120.1°120.0°
C07C08H08119.9°120.0°
C07C12C11116.9°120.0°
C07C12H12121.6°120.0°
C08C09C10118.9°120.0°
C09C08H08119.9°120.0°
C08C09H09120.6°119.9°
C09C10C11119.3°120.0°
C10C09H09120.6°120.0°
C09C10H10120.3°120.0°
C10C11C12122.9°120.0°
C11C10H10120.4°120.0°
C10C11H11118.6°120.0°
C11C12H12121.6°120.0°
C12C11H11118.5°120.0°
C13N14H14126.1°124.4°
N14C13H131110.6°110.3°
N14C13H132110.6°110.1°
H031C03H032109.5°110.6°
H051C05H052109.5°109.4°
H131C13H132109.5°110.3°
H061C06H062109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O01C02C03N14179.3°179.8°
O01C02C03C04158.5°163.7°
O01C02N14C13179.6°179.7°
O01C02C03H03139.5°45.1°
O01C02C03H03282.6°77.6°
O01C02N14H140.4°0.4°
C02C03C04H031118.9°118.6°
C02C03C04H032118.9°118.6°
C02C03C04C05149.9°142.9°
C02C03C04C1332.6°24.8°
C03C02N14C130.4°0.1°
C02C03H031H032123.0°122.6°
C03C02N14H14179.6°179.8°
C02C03C04H0487.6°93.4°
N14C02C03C0420.8°16.5°
C02N14C13C0420.5°16.7°
C02N14C13H14180.0°179.9°
N14C02C03H031139.7°135.2°
N14C02C03H03298.1°102.2°
C02N14C13H131139.8°135.7°
C02N14C13H13298.7°102.3°
C03C04C05C13113.8°112.4°
C03C04C05H04123.3°123.8°
C03C04C13H04120.9°118.2°
C03C04C05C06142.7°175.0°
C03C04C13N1434.0°25.3°
C04C03H031H032123.1°122.7°
C03C04C05H05196.5°55.0°
C03C04C05H05221.9°65.0°
C03C04C13H131153.2°144.4°
C03C04C13H13285.3°93.6°
C05C04C13H04122.8°123.7°
C04C05C06H051120.7°120.0°
C04C05C06H052120.8°120.1°
C04C05C06C07158.3°180.0°
C05C04C13N14150.3°143.4°
C05C04C03H03191.2°98.5°
C05C04C03H03231.0°24.3°
C04C05H051H052117.6°120.0°
C05C04C13H13190.5°97.5°
C05C04C13H13231.1°24.5°
C04C05C06H06137.6°60.0°
C04C05C06H06280.9°59.9°
C13C04C05C0628.9°72.7°
C04C13N14H131119.2°119.0°
C04C13N14H132119.2°119.0°
C13C04C03H031151.5°143.5°
C13C04C03H03286.3°93.8°
C04C13N14H14159.4°163.2°
C13C04C05H051149.7°167.3°
C13C04C05H05291.9°47.4°
C04C13H131H132122.2°122.0°
C05C06C07H061120.8°120.0°
C05C06C07H062120.8°120.1°
C05C06C07C0858.6°90.0°
C05C06C07C12120.9°90.3°
C06C05C04H0494.0°51.2°
C06C05H051H052117.6°120.0°
C05C06H061H062117.5°120.0°
C06C07C08C12179.6°179.6°
C06C07C08C09180.0°180.0°
C06C07C12C11179.9°179.8°
C07C06C05H05180.9°60.0°
C07C06C05H05237.6°60.0°
C07C06H061H062117.5°120.0°
C06C07C08H080.0°0.1°
C06C07C12H120.1°0.0°
C07C08C09H08180.0°179.9°
C07C08C09C100.7°0.1°
C08C07C12C110.3°0.5°
C08C07C06H06162.2°30.0°
C08C07C06H062179.4°149.9°
C08C07C12H12179.6°179.7°
C07C08C09H09179.3°179.9°
C12C07C08C090.5°0.4°
C07C12C11C100.4°0.4°
C07C12C11H12180.0°179.8°
C12C07C06H061118.2°149.7°
C12C07C06H0620.1°29.7°
C12C07C08H08179.5°179.7°
C07C12C11H11179.6°179.7°
C08C09C10H09180.0°180.0°
C08C09C10C110.8°0.0°
C08C09C10H10179.2°180.0°
C09C10C11H10180.0°180.0°
C09C10C11C120.7°0.2°
C10C09C08H08179.3°180.0°
C09C10C11H11179.3°179.9°
C10C11C12H11180.0°179.9°
C10C11C12H12179.5°179.8°
C11C10C09H09179.2°180.0°
C12C11C10H10179.3°179.9°
N14C13C04H0487.0°92.9°
N14C13H131H132122.2°121.8°
H031C03C04H0431.4°25.3°
H032C03C04H04153.5°148.0°
H14N14C13H13140.2°44.2°
H14N14C13H13281.3°77.8°
H04C04C05H05126.8°68.8°
H04C04C05H052145.3°171.2°
H04C04C13H13132.3°26.2°
H04C04C13H132153.8°148.3°
H051C05C06H061158.3°180.0°
H051C05C06H06239.9°60.1°
H052C05C06H06183.2°60.1°
H052C05C06H062158.4°180.0°
H08C08C09H090.7°0.1°
H12C12C11H110.5°0.1°
H09C09C10H100.8°0.1°
H10C10C11H110.7°0.0°

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PDB entries from 2024-08-07

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