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OHR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2DC2Dsing1.43Å1.34Å
O3DC3Dsing1.43Å1.50Å
C2DC3Dsing1.55Å1.57Å
C2DC1Dsing1.55Å1.55Å
O1DC1Dsing1.43Å1.40Å
C3DC4Dsing1.54Å1.29Å
C1DO4Dsing1.44Å1.29Å
O4DC4Dsing1.44Å1.65Å
C4DC5Dsing1.53Å1.53Å
C5DO5Dsing1.43Å1.44Å
O5DPBsing1.61Å1.68Å
O1APAdoub1.48Å1.51Å
O2APAsing1.61Å1.51Å
O3APBsing1.61Å1.65Å
O3APAsing1.61Å1.66Å
PBO1Bdoub1.48Å1.51Å
PBO2Bsing1.61Å1.52Å
PAO5'sing1.61Å1.66Å
N6C6sing1.38Å1.45Å
N7C8doub1.30Å1.34ÅAromatic
N7C5sing1.35Å1.36ÅAromatic
C6C5doub1.40Å1.42ÅAromatic
C6N1sing1.33Å1.33ÅAromatic
C8N9sing1.36Å1.33ÅAromatic
C5C4sing1.41Å1.37ÅAromatic
O5'C5'sing1.43Å1.40Å
N1C2doub1.32Å1.32ÅAromatic
C5'C4'sing1.53Å1.55Å
N9C4sing1.37Å1.35ÅAromatic
N9C1'sing1.46Å1.37Å
C4N3doub1.33Å1.35ÅAromatic
O4'C1'sing1.44Å1.54Å
O4'C4'sing1.44Å1.28Å
C2N3sing1.32Å1.33ÅAromatic
C1'C2'sing1.54Å1.52Å
C4'C3'sing1.54Å1.62Å
C2'C3'sing1.55Å1.29Å
C3'O3'sing1.43Å1.47Å
C4'H'4sing1.09Å1.10Å
C1'H'1sing1.09Å1.10Å
C8H5R2sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C3DHR'3sing1.09Å1.10Å
C4DHR'4sing1.09Å1.10Å
C5DH5R1sing1.09Å1.10Å
C5DH1sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
C2'H'2sing1.09Å1.10Å
C2'H3sing1.09Å1.10Å
C3'H'3sing1.09Å1.10Å
C1DHR'1sing1.09Å1.10Å
C2DHR'2sing1.09Å1.10Å
N6H61sing0.97Å1.00Å
N6H62sing0.97Å1.00Å
O3DHOR3sing0.97Å0.95Å
O2BHOB2sing0.97Å0.95Å
O2AHOA2sing0.97Å0.95Å
O3'HO'3sing0.97Å0.95Å
O1DHOR1sing0.97Å0.95Å
O2DHOR2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2DC2DC3D112.2°110.9°
O2DC2DC1D109.5°110.9°
O2DC2DHR'2112.4°110.8°
C2DO2DHOR2109.5°114.0°
O3DC3DC2D109.0°110.6°
O3DC3DC4D108.6°110.4°
O3DC3DHR'3110.3°110.5°
C3DO3DHOR3109.5°114.0°
C3DC2DC1D104.1°102.1°
C2DC3DC4D105.6°104.1°
C2DC3DHR'3109.4°110.5°
C3DC2DHR'2109.0°110.9°
C2DC1DO1D110.0°110.7°
C2DC1DO4D107.7°103.5°
C2DC1DHR'1107.7°110.6°
C1DC2DHR'2109.3°110.9°
O1DC1DO4D110.4°110.7°
O1DC1DHR'1109.6°110.5°
C1DO1DHOR1109.5°114.0°
C3DC4DO4D105.7°107.3°
C3DC4DC5D113.8°109.9°
C4DC3DHR'3113.8°110.5°
C3DC4DHR'4112.9°109.9°
C1DO4DC4D104.9°106.9°
O4DC1DHR'1111.4°110.6°
O4DC4DC5D107.2°109.9°
O4DC4DHR'4107.7°110.0°
C4DC5DO5D105.9°109.5°
C5DC4DHR'4109.2°109.9°
C4DC5DH5R1110.4°109.5°
C4DC5DH1110.4°109.5°
C5DO5DPB116.5°123.1°
O5DC5DH5R1110.4°109.4°
O5DC5DH1110.4°109.4°
O5DPBO3A108.8°109.5°
O5DPBO1B108.2°109.5°
O5DPBO2B111.0°109.4°
O1APAO2A114.7°109.5°
O1APAO3A106.1°109.4°
O1APAO5'108.9°109.5°
O2APAO3A112.1°109.5°
O2APAO5'109.3°109.4°
PAO2AHOA2109.5°114.0°
PBO3APA127.3°134.0°
O3APBO1B106.1°109.5°
O3APBO2B112.1°109.5°
O3APAO5'105.3°109.5°
O1BPBO2B110.5°109.5°
PBO2BHOB2109.5°114.0°
PAO5'C5'117.6°123.0°
N6C6C5121.0°120.8°
N6C6N1118.0°120.8°
C6N6H61109.5°120.0°
C6N6H62109.5°120.1°
C8N7C5108.8°109.5°
N7C8N9108.6°109.9°
N7C8H5R2125.7°125.1°
N7C5C6137.2°134.7°
N7C5C4106.2°107.1°
C5C6N1121.0°118.5°
C6C5C4116.7°118.2°
C6N1C2119.9°121.2°
C8N9C4108.3°107.5°
C8N9C1'129.5°126.3°
N9C8H5R2125.7°125.0°
C5C4N9108.1°106.0°
C5C4N3119.7°119.0°
O5'C5'C4'107.0°109.5°
O5'C5'H5'1110.1°109.5°
O5'C5'H5'2110.1°109.5°
N1C2N3121.5°122.5°
N1C2H2119.3°118.7°
C5'C4'O4'110.3°110.5°
C5'C4'C3'110.7°110.4°
C5'C4'H'4108.5°110.3°
C4'C5'H5'1110.1°109.5°
C4'C5'H5'2110.1°109.5°
C4N9C1'122.1°126.3°
N9C4N3132.2°135.0°
N9C1'O4'108.0°110.5°
N9C1'C2'116.0°110.4°
N9C1'H'1111.0°110.4°
C4N3C2121.3°120.7°
C1'O4'C4'107.4°105.3°
O4'C1'C2'103.9°104.8°
O4'C1'H'1108.6°110.4°
O4'C4'C3'106.9°104.8°
O4'C4'H'4112.7°110.4°
N3C2H2119.3°118.8°
C1'C2'C3'103.4°104.1°
C2'C1'H'1108.9°110.3°
C1'C2'H'2111.0°110.6°
C1'C2'H3111.0°110.5°
C4'C3'C2'106.8°104.1°
C4'C3'O3'107.3°110.5°
C3'C4'H'4107.6°110.4°
C4'C3'H'3108.4°110.5°
C2'C3'O3'110.4°110.5°
C3'C2'H'2111.0°110.5°
C3'C2'H3111.0°110.5°
C2'C3'H'3113.3°110.5°
O3'C3'H'3110.4°110.5°
C3'O3'HO'3109.5°114.0°
H5R1C5DH1109.4°109.5°
H5'1C5'H5'2109.5°109.5°
H'2C2'H3109.5°110.6°
H61N6H62109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2DC2DC3DO3D17.1°20.4°
O2DC2DC3DC1D118.3°118.2°
O2DC2DC3DHR'2125.2°123.6°
O2DC2DC1DHR'2123.5°123.6°
O2DC2DC1DO1D9.6°36.6°
O2DC2DC3DC4D133.6°139.0°
O2DC2DC1DO4D110.7°155.2°
O2DC2DC3DHR'3103.6°102.2°
O2DC2DC1DHR'1129.0°86.3°
O3DC3DC2DC4D116.5°118.7°
O3DC3DC2DHR'3120.7°122.6°
O3DC3DC2DC1D101.2°97.8°
O3DC3DC4DHR'3123.3°122.6°
O3DC3DC4DO4D87.8°120.8°
O3DC3DC4DC5D154.9°119.8°
O3DC3DC4DHR'429.7°1.2°
O3DC3DC2DHR'2142.2°144.0°
C3DC2DC1DHR'2116.4°118.2°
C3DC2DC1DO1D129.7°81.6°
C2DC3DC4DHR'3120.0°118.7°
C3DC2DC1DO4D9.4°37.0°
C2DC3DC4DO4D29.0°2.1°
C2DC3DC4DC5D88.4°121.5°
C2DC3DC4DHR'4146.5°117.5°
C3DC2DC1DHR'1110.9°155.5°
C2DC3DO3DHOR3180.0°65.2°
C3DC2DO2DHOR2180.0°179.9°
C2DC1DO1DO4D118.7°114.2°
C2DC1DO1DHR'1118.2°122.9°
C1DC2DC3DC4D15.3°20.9°
C2DC1DO4DHR'1117.9°118.5°
C2DC1DO4DC4D25.1°40.1°
C1DC2DC3DHR'3138.1°139.6°
C2DC1DO1DHOR1180.0°175.6°
C1DC2DO2DHOR264.9°67.4°
O1DC1DO4DHR'1122.0°122.8°
O1DC1DO4DC4D145.1°78.6°
O1DC1DC2DHR'2113.9°160.2°
C3DC4DO4DC1D37.0°26.5°
C3DC4DO4DC5D121.7°119.4°
C3DC4DO4DHR'4120.9°119.5°
C3DC4DC5DHR'4127.1°121.0°
C3DC4DC5DO5D179.7°175.0°
C3DC4DC5DH5R160.2°55.0°
C3DC4DC5DH160.9°65.0°
C4DC3DC2DHR'2101.3°97.4°
C4DC3DO3DHOR365.4°180.0°
C1DO4DC4DC5D84.7°146.0°
C1DO4DC4DHR'4158.0°93.0°
O4DC1DC2DHR'2125.8°81.2°
O4DC1DO1DHOR161.3°61.4°
O4DC4DC5DHR'4116.4°121.1°
O4DC4DC5DO5D63.8°67.1°
O4DC4DC3DHR'3148.9°116.6°
O4DC4DC5DH5R1176.7°172.9°
O4DC4DC5DH155.7°52.8°
C4DO4DC1DHR'192.8°158.6°
C4DC5DO5DH5R1119.5°120.0°
C4DC5DO5DH1119.5°120.0°
C4DC5DO5DPB162.7°180.0°
C5DC4DC3DHR'331.6°2.8°
C4DC5DH5R1H1121.6°120.0°
C5DO5DPBO3A73.1°175.0°
C5DO5DPBO1B41.7°55.0°
C5DO5DPBO2B163.1°65.0°
O5DC5DC4DHR'452.6°54.0°
O5DC5DH5R1H1121.6°119.9°
O5DPBO3AO1B116.1°120.0°
O5DPBO3AO2B123.2°120.0°
O5DPBO3APA77.8°160.0°
O5DPBO1BO2B121.8°119.9°
PBO5DC5DH5R177.9°60.0°
PBO5DC5DH143.2°60.0°
O5DPBO2BHOB2120.0°60.1°
O1APAO2AO3A121.1°120.0°
O1APAO2AO5'122.6°120.0°
O1APAO3APB154.7°40.1°
O1APAO3AO5'115.3°120.0°
O1APAO5'C5'69.8°55.0°
O1APAO2AHOA20.0°180.0°
O2APAO3APB28.8°80.0°
O2APAO3AO5'118.8°120.0°
O2APAO5'C5'164.2°65.0°
O3APBO1BO2B121.7°120.0°
PBO3APAO5'90.0°160.1°
O3APBO2BHOB2118.1°59.9°
PAO3APBO1B166.1°39.9°
PAO3APBO2B45.4°80.1°
O3APAO5'C5'43.6°174.9°
O3APAO2AHOA2121.1°60.0°
O1BPBO2BHOB20.0°180.0°
PAO5'C5'C4'152.9°180.0°
PAO5'C5'H5'187.5°60.0°
PAO5'C5'H5'233.3°60.0°
O5'PAO2AHOA2122.5°60.0°
N6C6C5N70.4°0.5°
N6C6C5N1179.9°180.0°
N6C6C5C4179.9°179.9°
N6C6N1C2179.7°180.0°
C6N6H61H62120.0°179.9°
C8N7C5C6179.9°179.7°
N7C8N9H5R2180.0°179.7°
C8N7C5C40.3°0.3°
N7C8N9C40.5°0.3°
N7C8N9C1'178.6°179.7°
N7C5C6C4179.7°179.4°
N7C5C6N1179.7°179.4°
C5N7C8N90.1°0.0°
N7C5C4N90.6°0.4°
N7C5C4N3179.5°179.6°
C5N7C8H5R2179.9°179.7°
C5C6N1C20.3°0.0°
C6C5C4N9179.5°180.0°
C6C5C4N30.4°0.1°
C5C6N6H61179.9°0.0°
C5C6N6H6260.1°179.9°
N1C6C5C40.1°0.0°
C6N1C2N30.8°0.1°
C6N1C2H2179.2°180.0°
N1C6N6H610.0°180.0°
N1C6N6H62120.0°0.1°
C8N9C4C50.7°0.4°
C8N9C4C1'178.2°180.0°
C8N9C4N3179.4°179.6°
C8N9C1'O4'99.3°20.4°
C8N9C1'C2'16.8°95.0°
C8N9C1'H'1141.7°142.8°
C5C4N9N3179.9°180.0°
C5C4N9C1'179.0°179.6°
C5C4N3C20.9°0.0°
O5'C5'C4'H5'1119.6°120.0°
O5'C5'C4'H5'2119.6°120.0°
O5'C5'C4'O4'90.0°69.6°
O5'C5'C4'C3'28.2°175.0°
O5'C5'C4'H'4146.1°52.7°
O5'C5'H5'1H5'2121.1°120.0°
N1C2N3C41.1°0.0°
N1C2N3H2180.0°179.9°
C5'C4'O4'C1'122.3°159.4°
C5'C4'O4'C3'120.5°118.9°
C5'C4'O4'H'4121.5°122.3°
C5'C4'C3'H'4118.5°122.2°
C5'C4'C3'C2'99.4°142.9°
C5'C4'C3'O3'142.2°98.4°
C4'C5'H5'1H5'2121.1°120.0°
C5'C4'C3'H'323.1°24.3°
C4N9C1'O4'78.5°159.6°
N9C4N3C2179.0°180.0°
C4N9C1'C2'165.4°85.0°
C4N9C1'H'140.5°37.2°
C4N9C8H5R2179.5°180.0°
C1'N9C4N31.2°0.4°
N9C1'O4'C2'123.7°118.9°
N9C1'O4'H'1120.5°122.4°
N9C1'O4'C4'144.0°159.4°
N9C1'C2'H'1126.0°122.2°
N9C1'C2'C3'151.7°142.9°
C1'N9C8H5R21.4°0.0°
N9C1'C2'H'289.3°98.4°
N9C1'C2'H332.7°24.3°
C4N3C2H2178.9°180.0°
O4'C1'C2'H'1115.6°118.8°
C1'O4'C4'C3'1.8°40.5°
O4'C1'C2'C3'33.4°24.0°
C1'O4'C4'H'4116.2°78.3°
O4'C1'C2'H'2152.4°142.6°
O4'C1'C2'H385.6°94.7°
C4'O4'C1'C2'20.3°40.5°
O4'C4'C3'H'4121.3°118.8°
O4'C4'C3'C2'20.8°23.9°
O4'C4'C3'O3'97.6°142.6°
C4'O4'C1'H'195.5°78.3°
O4'C4'C5'H5'1150.4°170.4°
O4'C4'C5'H5'229.6°50.4°
O4'C4'C3'H'3143.3°94.7°
C1'C2'C3'C4'32.1°0.0°
C1'C2'C3'H'2119.0°118.7°
C1'C2'C3'H3119.0°118.6°
C1'C2'C3'O3'84.2°118.7°
C1'C2'H'2H3122.8°122.7°
C1'C2'C3'H'3151.4°118.6°
C4'C3'C2'O3'116.3°118.7°
C4'C3'C2'H'3119.3°118.6°
C4'C3'O3'H'3117.9°122.7°
C3'C4'C5'H5'191.4°55.0°
C3'C4'C5'H5'2147.8°65.0°
C4'C3'C2'H'2151.1°118.7°
C4'C3'C2'H387.0°118.6°
C4'C3'O3'HO'3180.0°180.0°
C2'C3'O3'H'3126.1°122.7°
C2'C3'C4'H'4142.1°94.9°
C3'C2'C1'H'182.3°94.8°
C3'C2'H'2H3122.8°122.7°
C2'C3'O3'HO'364.0°65.3°
O3'C3'C4'H'423.7°23.8°
O3'C3'C2'H'234.8°0.0°
O3'C3'C2'H3156.7°122.7°
H'4C4'C5'H5'126.5°67.3°
H'4C4'C5'H5'294.3°172.7°
H'4C4'C3'H'395.4°146.5°
H'1C1'C2'H'236.8°23.8°
H'1C1'C2'H3158.7°146.5°
HR'3C3DC4DHR'493.6°123.8°
HR'3C3DC2DHR'221.5°21.3°
HR'3C3DO3DHOR359.9°57.4°
HR'4C4DC5DH5R166.9°66.0°
HR'4C4DC5DH1172.0°174.0°
H'2C2'C3'H'389.6°122.7°
H3C2'C3'H'332.3°0.0°
H'3C3'O3'HO'362.1°57.3°
HR'1C1DC2DHR'25.5°37.3°
HR'1C1DO1DHOR161.8°61.5°
HR'2C2DO2DHOR256.7°56.3°

221716

PDB entries from 2024-06-26

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