OGC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.20Å | |
C | CA | sing | 1.51Å | 1.52Å | |
O79 | CB | sing | 1.43Å | 1.41Å | |
CB | CA | sing | 1.53Å | 1.53Å | |
CB | CG | sing | 1.51Å | 1.53Å | |
CA | N | sing | 1.47Å | 1.45Å | |
CG | CD2 | doub | 1.35Å | 1.39Å | Aromatic |
CG | ND1 | sing | 1.37Å | 1.34Å | Aromatic |
CD2 | NE2 | sing | 1.34Å | 1.33Å | Aromatic |
ND1 | C78 | sing | 1.47Å | 1.45Å | |
ND1 | CE1 | sing | 1.35Å | 1.33Å | Aromatic |
NE2 | CE1 | doub | 1.31Å | 1.33Å | Aromatic |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
C78 | H6 | sing | 1.09Å | 1.10Å | |
C78 | H7 | sing | 1.09Å | 1.10Å | |
C78 | H8 | sing | 1.09Å | 1.10Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
N | H | sing | 1.01Å | 1.00Å | |
O79 | H12 | sing | 0.97Å | 0.95Å | |
C | OXT | sing | 1.34Å | 1.43Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 122.6° | 120.0° |
O | C | OXT | 122.4° | 120.0° |
C | CA | CB | 105.6° | 109.5° |
C | CA | N | 110.5° | 109.5° |
C | CA | HA | 110.0° | 109.5° |
CA | C | OXT | 114.9° | 120.0° |
O79 | CB | CA | 108.9° | 109.4° |
O79 | CB | CG | 109.1° | 109.5° |
O79 | CB | HB2 | 109.3° | 109.5° |
CB | O79 | H12 | 109.5° | 114.0° |
CA | CB | CG | 114.1° | 109.5° |
CB | CA | N | 109.7° | 109.5° |
CB | CA | HA | 109.8° | 109.5° |
CA | CB | HB2 | 107.7° | 109.5° |
CB | CG | CD2 | 126.6° | 126.6° |
CB | CG | ND1 | 127.4° | 126.6° |
CG | CB | HB2 | 107.6° | 109.5° |
N | CA | HA | 111.0° | 109.5° |
CA | N | H2 | 109.5° | 111.0° |
CA | N | H | 109.5° | 111.0° |
CD2 | CG | ND1 | 106.0° | 106.8° |
CG | CD2 | NE2 | 108.2° | 108.0° |
CG | CD2 | HD2 | 125.9° | 126.0° |
CG | ND1 | C78 | 126.8° | 126.4° |
CG | ND1 | CE1 | 108.5° | 107.2° |
CD2 | NE2 | CE1 | 107.5° | 109.3° |
NE2 | CD2 | HD2 | 125.9° | 126.0° |
C78 | ND1 | CE1 | 124.7° | 126.4° |
ND1 | C78 | H6 | 109.5° | 109.5° |
ND1 | C78 | H7 | 109.5° | 109.5° |
ND1 | C78 | H8 | 109.5° | 109.5° |
ND1 | CE1 | NE2 | 109.7° | 108.7° |
ND1 | CE1 | HE1 | 125.1° | 125.7° |
NE2 | CE1 | HE1 | 125.1° | 125.6° |
H6 | C78 | H7 | 109.5° | 109.4° |
H6 | C78 | H8 | 109.5° | 109.4° |
H7 | C78 | H8 | 109.4° | 109.5° |
H2 | N | H | 109.4° | 111.0° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 178.8° | 180.0° |
O | C | CA | CB | 88.3° | 100.0° |
O | C | CA | N | 30.3° | 20.0° |
O | C | CA | HA | 153.3° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
C | CA | CB | O79 | 66.0° | 60.0° |
C | CA | CB | N | 119.1° | 120.0° |
C | CA | CB | HA | 118.6° | 120.0° |
C | CA | CB | CG | 171.8° | 180.0° |
C | CA | N | HA | 122.4° | 120.0° |
C | CA | CB | HB2 | 52.4° | 60.0° |
C | CA | N | H2 | 180.0° | 60.0° |
C | CA | N | H | 60.0° | 64.0° |
CA | C | OXT | HXT | 178.8° | 180.0° |
O79 | CB | CA | CG | 122.2° | 120.0° |
O79 | CB | CA | HB2 | 118.4° | 120.0° |
O79 | CB | CG | HB2 | 118.5° | 120.0° |
O79 | CB | CA | N | 174.9° | 180.0° |
O79 | CB | CG | CD2 | 123.1° | 35.0° |
O79 | CB | CG | ND1 | 54.7° | 144.8° |
O79 | CB | CA | HA | 52.6° | 60.0° |
CA | CB | CG | HB2 | 119.4° | 120.0° |
CB | CA | N | HA | 121.6° | 120.0° |
CA | CB | CG | CD2 | 114.8° | 85.0° |
CA | CB | CG | ND1 | 67.4° | 95.3° |
CB | CA | N | H2 | 64.0° | 60.0° |
CB | CA | N | H | 56.0° | 176.1° |
CA | CB | O79 | H12 | 180.0° | 60.0° |
CB | CA | C | OXT | 90.5° | 80.0° |
CG | CB | CA | N | 52.6° | 60.0° |
CB | CG | CD2 | ND1 | 178.2° | 179.8° |
CB | CG | CD2 | NE2 | 178.9° | 180.0° |
CB | CG | ND1 | C78 | 1.3° | 0.0° |
CB | CG | ND1 | CE1 | 178.8° | 179.9° |
CG | CB | CA | HA | 69.7° | 60.0° |
CB | CG | CD2 | HD2 | 1.1° | 0.0° |
CG | CB | O79 | H12 | 54.8° | 60.0° |
N | CA | CB | HB2 | 66.8° | 60.0° |
CA | N | H2 | H | 120.0° | 124.0° |
N | CA | C | OXT | 150.9° | 160.0° |
CG | CD2 | NE2 | HD2 | 180.0° | 180.0° |
CD2 | CG | ND1 | C78 | 179.5° | 179.8° |
CD2 | CG | ND1 | CE1 | 0.6° | 0.3° |
CG | CD2 | NE2 | CE1 | 0.6° | 0.0° |
CD2 | CG | CB | HB2 | 4.6° | 155.0° |
ND1 | CG | CD2 | NE2 | 0.7° | 0.2° |
CG | ND1 | C78 | CE1 | 179.9° | 179.8° |
CG | ND1 | CE1 | NE2 | 0.3° | 0.3° |
ND1 | CG | CB | HB2 | 173.2° | 24.7° |
ND1 | CG | CD2 | HD2 | 179.3° | 179.8° |
CG | ND1 | CE1 | HE1 | 179.8° | 179.9° |
CG | ND1 | C78 | H6 | 180.0° | 90.0° |
CG | ND1 | C78 | H7 | 60.0° | 150.0° |
CG | ND1 | C78 | H8 | 60.0° | 29.9° |
CD2 | NE2 | CE1 | ND1 | 0.2° | 0.2° |
CD2 | NE2 | CE1 | HE1 | 179.8° | 180.0° |
C78 | ND1 | CE1 | NE2 | 179.8° | 179.8° |
C78 | ND1 | CE1 | HE1 | 0.2° | 0.0° |
ND1 | C78 | H6 | H7 | 120.0° | 120.0° |
ND1 | C78 | H6 | H8 | 120.0° | 120.0° |
ND1 | C78 | H7 | H8 | 120.0° | 120.1° |
ND1 | CE1 | NE2 | HE1 | 180.0° | 179.8° |
CE1 | ND1 | C78 | H6 | 0.0° | 89.8° |
CE1 | ND1 | C78 | H7 | 120.0° | 30.1° |
CE1 | ND1 | C78 | H8 | 120.1° | 150.2° |
CE1 | NE2 | CD2 | HD2 | 179.4° | 180.0° |
HA | CA | CB | HB2 | 170.9° | 180.0° |
HA | CA | N | H2 | 57.6° | 180.0° |
HA | CA | N | H | 177.6° | 56.0° |
HA | CA | C | OXT | 27.9° | 40.0° |
HB2 | CB | O79 | H12 | 62.6° | 180.0° |
H6 | C78 | H7 | H8 | 120.0° | 120.0° |