OG9
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CA | C | sing | 1.51Å | 1.51Å | |
CA | C05 | sing | 1.51Å | 1.52Å | |
C | O | doub | 1.21Å | 1.25Å | |
C19 | C20 | doub | 1.32Å | 1.38Å | Aromatic |
C19 | C18 | sing | 1.47Å | 1.40Å | Aromatic |
C05 | C18 | doub | 1.31Å | 1.41Å | Aromatic |
C05 | C06 | sing | 1.47Å | 1.40Å | Aromatic |
C20 | C15 | sing | 1.47Å | 1.41Å | Aromatic |
C18 | C17 | sing | 1.47Å | 1.40Å | Aromatic |
C06 | C07 | doub | 1.32Å | 1.40Å | Aromatic |
C15 | C14 | doub | 1.31Å | 1.42Å | Aromatic |
C15 | C16 | sing | 1.47Å | 1.39Å | Aromatic |
C17 | C16 | doub | 1.30Å | 1.38Å | Aromatic |
C17 | C08 | sing | 1.47Å | 1.39Å | Aromatic |
C14 | C13 | sing | 1.47Å | 1.39Å | Aromatic |
C07 | C08 | sing | 1.47Å | 1.42Å | Aromatic |
C16 | C11 | sing | 1.47Å | 1.39Å | Aromatic |
C08 | C09 | doub | 1.31Å | 1.41Å | Aromatic |
C13 | C12 | doub | 1.32Å | 1.40Å | Aromatic |
C11 | C12 | sing | 1.47Å | 1.41Å | Aromatic |
C11 | C10 | doub | 1.31Å | 1.41Å | Aromatic |
C09 | C10 | sing | 1.48Å | 1.37Å | Aromatic |
CA | H1 | sing | 1.09Å | 1.10Å | |
CA | H2 | sing | 1.09Å | 1.10Å | |
C06 | H4 | sing | 1.08Å | 1.08Å | |
C07 | H5 | sing | 1.08Å | 1.08Å | |
C09 | H6 | sing | 1.08Å | 1.08Å | |
C10 | H7 | sing | 1.08Å | 1.08Å | |
C12 | H8 | sing | 1.08Å | 1.08Å | |
C13 | H9 | sing | 1.08Å | 1.08Å | |
C14 | H10 | sing | 1.08Å | 1.08Å | |
C19 | H11 | sing | 1.08Å | 1.08Å | |
C20 | H12 | sing | 1.08Å | 1.08Å | |
C | O1 | sing | 1.34Å | 1.33Å | |
O1 | H3 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C | CA | C05 | 116.5° | 109.5° |
CA | C | O | 121.5° | 120.0° |
C | CA | H1 | 107.7° | 109.5° |
C | CA | H2 | 107.7° | 109.4° |
CA | C | O1 | 114.8° | 120.0° |
CA | C05 | C18 | 119.4° | 119.0° |
CA | C05 | C06 | 120.2° | 119.0° |
C05 | CA | H1 | 107.7° | 109.5° |
C05 | CA | H2 | 107.7° | 109.5° |
O | C | O1 | 123.8° | 120.0° |
C20 | C19 | C18 | 119.5° | 120.2° |
C19 | C20 | C15 | 120.1° | 120.3° |
C20 | C19 | H11 | 120.2° | 119.9° |
C19 | C20 | H12 | 120.0° | 119.9° |
C19 | C18 | C05 | 119.6° | 121.7° |
C19 | C18 | C17 | 120.4° | 119.1° |
C18 | C19 | H11 | 120.2° | 119.9° |
C18 | C05 | C06 | 120.4° | 121.9° |
C05 | C18 | C17 | 120.0° | 119.1° |
C05 | C06 | C07 | 119.7° | 122.8° |
C05 | C06 | H4 | 120.2° | 118.6° |
C20 | C15 | C14 | 119.9° | 121.8° |
C20 | C15 | C16 | 120.1° | 119.1° |
C15 | C20 | H12 | 120.0° | 119.8° |
C18 | C17 | C16 | 120.1° | 120.6° |
C18 | C17 | C08 | 119.9° | 119.1° |
C06 | C07 | C08 | 120.0° | 119.3° |
C07 | C06 | H4 | 120.1° | 118.6° |
C06 | C07 | H5 | 120.0° | 120.3° |
C14 | C15 | C16 | 119.9° | 119.1° |
C15 | C14 | C13 | 120.0° | 122.0° |
C15 | C14 | H10 | 120.0° | 119.0° |
C15 | C16 | C17 | 119.8° | 120.6° |
C15 | C16 | C11 | 120.1° | 119.1° |
C16 | C17 | C08 | 120.0° | 120.3° |
C17 | C16 | C11 | 120.1° | 120.2° |
C17 | C08 | C07 | 120.1° | 117.6° |
C17 | C08 | C09 | 120.0° | 119.7° |
C14 | C13 | C12 | 120.1° | 122.7° |
C14 | C13 | H9 | 119.9° | 118.6° |
C13 | C14 | H10 | 120.0° | 119.0° |
C07 | C08 | C09 | 119.9° | 122.6° |
C08 | C07 | H5 | 120.0° | 120.3° |
C16 | C11 | C12 | 120.1° | 117.6° |
C16 | C11 | C10 | 120.0° | 119.7° |
C08 | C09 | C10 | 120.1° | 120.0° |
C08 | C09 | H6 | 120.0° | 120.0° |
C13 | C12 | C11 | 119.8° | 119.4° |
C13 | C12 | H8 | 120.1° | 120.3° |
C12 | C13 | H9 | 119.9° | 118.7° |
C12 | C11 | C10 | 119.9° | 122.6° |
C11 | C12 | H8 | 120.1° | 120.3° |
C11 | C10 | C09 | 119.7° | 120.0° |
C11 | C10 | H7 | 120.1° | 120.0° |
C10 | C09 | H6 | 119.9° | 120.0° |
C09 | C10 | H7 | 120.2° | 120.0° |
H1 | CA | H2 | 109.5° | 109.5° |
C | O1 | H3 | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C | CA | C05 | H1 | 121.0° | 120.0° |
C | CA | C05 | H2 | 121.0° | 120.0° |
CA | C | O | O1 | 179.3° | 179.9° |
C | CA | C05 | C18 | 99.1° | 85.1° |
C | CA | C05 | C06 | 82.5° | 94.7° |
C | CA | H1 | H2 | 116.8° | 120.0° |
CA | C | O1 | H3 | 179.3° | 180.0° |
C05 | CA | C | O | 43.9° | 0.0° |
CA | C05 | C18 | C19 | 1.3° | 0.1° |
CA | C05 | C18 | C06 | 178.4° | 179.8° |
CA | C05 | C18 | C17 | 179.0° | 179.8° |
CA | C05 | C06 | C07 | 179.0° | 180.0° |
C05 | CA | H1 | H2 | 116.8° | 120.0° |
CA | C05 | C06 | H4 | 1.0° | 0.0° |
C05 | CA | C | O1 | 136.8° | 180.0° |
O | C | CA | H1 | 77.1° | 120.0° |
O | C | CA | H2 | 164.9° | 120.0° |
O | C | O1 | H3 | 0.0° | 0.0° |
C20 | C19 | C18 | H11 | 180.0° | 179.2° |
C20 | C19 | C18 | C05 | 179.6° | 179.2° |
C19 | C20 | C15 | H12 | 180.0° | 179.2° |
C20 | C19 | C18 | C17 | 0.1° | 0.7° |
C19 | C20 | C15 | C14 | 179.9° | 179.4° |
C19 | C20 | C15 | C16 | 0.1° | 0.5° |
C19 | C18 | C05 | C17 | 179.7° | 179.9° |
C19 | C18 | C05 | C06 | 179.7° | 179.8° |
C18 | C19 | C20 | C15 | 0.1° | 0.8° |
C19 | C18 | C17 | C16 | 0.0° | 0.1° |
C19 | C18 | C17 | C08 | 180.0° | 179.8° |
C18 | C19 | C20 | H12 | 179.9° | 179.9° |
C18 | C05 | C06 | C07 | 0.6° | 0.2° |
C05 | C18 | C17 | C16 | 179.7° | 179.8° |
C05 | C18 | C17 | C08 | 0.3° | 0.3° |
C18 | C05 | CA | H1 | 139.9° | 34.9° |
C18 | C05 | CA | H2 | 21.9° | 155.0° |
C18 | C05 | C06 | H4 | 179.4° | 179.8° |
C05 | C18 | C19 | H11 | 0.4° | 0.1° |
C06 | C05 | C18 | C17 | 0.6° | 0.4° |
C05 | C06 | C07 | H4 | 180.0° | 180.0° |
C05 | C06 | C07 | C08 | 0.3° | 0.1° |
C06 | C05 | CA | H1 | 38.5° | 145.3° |
C06 | C05 | CA | H2 | 156.5° | 25.2° |
C05 | C06 | C07 | H5 | 179.8° | 180.0° |
C20 | C15 | C14 | C16 | 180.0° | 179.9° |
C20 | C15 | C16 | C17 | 0.0° | 0.1° |
C20 | C15 | C14 | C13 | 180.0° | 180.0° |
C20 | C15 | C16 | C11 | 180.0° | 180.0° |
C20 | C15 | C14 | H10 | 0.0° | 0.1° |
C15 | C20 | C19 | H11 | 179.9° | 180.0° |
C18 | C17 | C16 | C15 | 0.1° | 0.2° |
C18 | C17 | C16 | C08 | 180.0° | 179.9° |
C18 | C17 | C08 | C07 | 0.0° | 0.1° |
C18 | C17 | C16 | C11 | 180.0° | 179.8° |
C18 | C17 | C08 | C09 | 180.0° | 179.8° |
C17 | C18 | C19 | H11 | 179.9° | 179.8° |
C06 | C07 | C08 | C17 | 0.0° | 0.1° |
C06 | C07 | C08 | H5 | 180.0° | 179.9° |
C06 | C07 | C08 | C09 | 180.0° | 180.0° |
C14 | C15 | C16 | C17 | 180.0° | 180.0° |
C15 | C14 | C13 | H10 | 180.0° | 180.0° |
C14 | C15 | C16 | C11 | 0.1° | 0.1° |
C15 | C14 | C13 | C12 | 0.2° | 0.0° |
C15 | C14 | C13 | H9 | 179.9° | 179.9° |
C14 | C15 | C20 | H12 | 0.1° | 0.2° |
C15 | C16 | C17 | C11 | 179.9° | 180.0° |
C15 | C16 | C17 | C08 | 180.0° | 179.9° |
C16 | C15 | C14 | C13 | 0.1° | 0.1° |
C15 | C16 | C11 | C12 | 0.2° | 0.0° |
C15 | C16 | C11 | C10 | 180.0° | 179.9° |
C16 | C15 | C14 | H10 | 179.9° | 180.0° |
C16 | C15 | C20 | H12 | 179.9° | 179.7° |
C16 | C17 | C08 | C07 | 180.0° | 180.0° |
C16 | C17 | C08 | C09 | 0.0° | 0.1° |
C17 | C16 | C11 | C12 | 179.9° | 180.0° |
C17 | C16 | C11 | C10 | 0.0° | 0.1° |
C17 | C08 | C07 | C09 | 180.0° | 179.9° |
C08 | C17 | C16 | C11 | 0.0° | 0.1° |
C17 | C08 | C09 | C10 | 0.0° | 0.1° |
C17 | C08 | C07 | H5 | 180.0° | 180.0° |
C17 | C08 | C09 | H6 | 180.0° | 180.0° |
C14 | C13 | C12 | H9 | 180.0° | 179.9° |
C14 | C13 | C12 | C11 | 0.3° | 0.1° |
C14 | C13 | C12 | H8 | 179.7° | 179.9° |
C07 | C08 | C09 | C10 | 180.0° | 180.0° |
C08 | C07 | C06 | H4 | 179.7° | 180.0° |
C07 | C08 | C09 | H6 | 0.0° | 0.0° |
C16 | C11 | C12 | C13 | 0.2° | 0.1° |
C16 | C11 | C12 | C10 | 179.9° | 179.9° |
C16 | C11 | C10 | C09 | 0.0° | 0.1° |
C16 | C11 | C10 | H7 | 180.0° | 180.0° |
C16 | C11 | C12 | H8 | 179.8° | 179.9° |
C08 | C09 | C10 | C11 | 0.0° | 0.1° |
C08 | C09 | C10 | H6 | 180.0° | 179.9° |
C09 | C08 | C07 | H5 | 0.0° | 0.1° |
C08 | C09 | C10 | H7 | 180.0° | 180.0° |
C13 | C12 | C11 | H8 | 180.0° | 180.0° |
C13 | C12 | C11 | C10 | 179.9° | 179.9° |
C12 | C13 | C14 | H10 | 179.8° | 180.0° |
C12 | C11 | C10 | C09 | 179.9° | 180.0° |
C12 | C11 | C10 | H7 | 0.1° | 0.1° |
C11 | C12 | C13 | H9 | 179.8° | 180.0° |
C11 | C10 | C09 | H7 | 180.0° | 179.9° |
C11 | C10 | C09 | H6 | 180.0° | 179.9° |
C10 | C11 | C12 | H8 | 0.1° | 0.1° |
H1 | CA | C | O1 | 102.2° | 60.0° |
H2 | CA | C | O1 | 15.8° | 60.0° |
H4 | C06 | C07 | H5 | 0.2° | 0.1° |
H6 | C09 | C10 | H7 | 0.0° | 0.0° |
H8 | C12 | C13 | H9 | 0.2° | 0.0° |
H9 | C13 | C14 | H10 | 0.1° | 0.0° |
H11 | C19 | C20 | H12 | 0.1° | 0.8° |