Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

ODQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C7doub1.21Å1.22Å
C9C8sing1.53Å1.53Å
C7Nsing1.33Å1.36Å
C7C8sing1.50Å1.54Å
NC6sing1.38Å1.42Å
C8C10sing1.53Å1.55Å
C8N1sing1.46Å1.58Å
C13N1sing1.46Å1.46Å
C10C11sing1.53Å1.52Å
N1Csing1.33Å1.36Å
C6C5doub1.40Å1.39ÅAromatic
C6C1sing1.40Å1.42ÅAromatic
C5C4sing1.38Å1.39ÅAromatic
C11C12sing1.53Å1.51Å
CC1sing1.47Å1.50Å
COdoub1.22Å1.22Å
C1C2doub1.40Å1.40ÅAromatic
C4C3doub1.39Å1.38ÅAromatic
C2C3sing1.38Å1.38ÅAromatic
C9H1sing1.09Å1.10Å
C9H2sing1.09Å1.10Å
C9H3sing1.09Å1.10Å
C10H4sing1.09Å1.10Å
C10H5sing1.09Å1.10Å
C11H6sing1.09Å1.10Å
C11H7sing1.09Å1.10Å
C12H8sing1.09Å1.10Å
C12H9sing1.09Å1.10Å
C12H10sing1.09Å1.10Å
C13H11sing1.09Å1.10Å
C13H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
NH14sing0.97Å1.00Å
C5H15sing1.08Å1.08Å
C4H16sing1.08Å1.08Å
C3H17sing1.08Å1.08Å
C2H18sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C7N119.4°119.0°
O1C7C8121.3°119.0°
C9C8C7103.8°109.6°
C9C8C10101.7°109.6°
C9C8N1112.6°109.7°
C8C9H1109.5°109.5°
C8C9H2109.4°109.4°
C8C9H3109.5°109.5°
NC7C8119.3°121.9°
C7NC6128.9°125.6°
C7NH14115.5°117.2°
C7C8C10113.8°109.6°
C7C8N1108.9°108.9°
NC6C5117.1°117.3°
NC6C1123.4°123.3°
C6NH14115.6°117.2°
C10C8N1115.3°109.6°
C8C10C11116.9°109.5°
C8C10H4107.6°109.5°
C8C10H5107.6°109.5°
C8N1C13117.2°119.3°
C8N1C123.5°121.5°
C13N1C117.9°119.2°
N1C13H11109.5°109.5°
N1C13H12109.5°109.5°
N1C13H13109.5°109.5°
C10C11C12112.6°109.5°
C11C10H4107.6°109.4°
C11C10H5107.6°109.4°
C10C11H6108.7°109.4°
C10C11H7108.7°109.5°
N1CC1119.3°124.5°
N1CO120.7°117.8°
C5C6C1119.5°119.4°
C6C5C4120.1°120.7°
C6C5H15119.9°119.6°
C6C1C125.0°123.2°
C6C1C2119.1°119.2°
C5C4C3120.5°120.1°
C4C5H15119.9°119.7°
C5C4H16119.8°119.9°
C12C11H6108.6°109.5°
C12C11H7108.7°109.5°
C11C12H8109.5°109.5°
C11C12H9109.4°109.5°
C11C12H10109.5°109.4°
C1CO120.0°117.7°
CC1C2115.7°117.6°
C1C2C3120.4°120.4°
C1C2H18119.8°119.8°
C4C3C2120.4°120.1°
C3C4H16119.8°119.9°
C4C3H17119.8°119.9°
C2C3H17119.8°120.0°
C3C2H18119.8°119.8°
H1C9H2109.5°109.4°
H1C9H3109.5°109.4°
H2C9H3109.5°109.5°
H4C10H5109.5°109.5°
H6C11H7109.5°109.5°
H8C12H9109.5°109.5°
H8C12H10109.5°109.5°
H9C12H10109.5°109.5°
H11C13H12109.4°109.5°
H11C13H13109.5°109.4°
H12C13H13109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C7C8C938.2°3.5°
O1C7NC8179.1°179.7°
O1C7NC6134.1°177.4°
O1C7C8C1071.4°123.8°
O1C7C8N1158.4°116.4°
O1C7NH1445.9°2.5°
C9C8C7N140.9°176.2°
C9C8C7C10109.6°120.2°
C9C8C7N1120.2°120.0°
C9C8C10N1122.1°120.4°
C9C8N1C1326.9°2.9°
C9C8C10C11166.8°60.2°
C9C8N1C167.3°177.1°
C8C9H1H2120.0°120.0°
C8C9H1H3120.0°120.0°
C8C9H2H3120.0°120.0°
C9C8C10H472.1°179.8°
C9C8C10H545.7°59.8°
C7NC6H14180.0°179.9°
NC7C8C10109.4°56.0°
NC7C8N120.7°63.8°
C7NC6C5123.7°139.1°
C7NC6C154.1°41.0°
C8C7NC646.8°2.3°
C7C8C10N1126.9°119.4°
C7C8N1C1387.7°117.0°
C7C8C10C1155.9°60.0°
C7C8N1C78.1°63.0°
C7C8C9H1180.0°60.0°
C7C8C9H260.0°180.0°
C7C8C9H360.0°60.0°
C7C8C10H4177.0°60.0°
C7C8C10H565.2°180.0°
C8C7NH14133.2°177.7°
NC6C5C1177.9°179.9°
NC6C5C4177.7°179.6°
NC6C1C2.3°0.8°
NC6C1C2178.1°179.5°
NC6C5H152.3°0.3°
C10C8N1C13143.0°123.2°
C8C10C11H4121.1°120.0°
C8C10C11H5121.1°120.0°
C10C8N1C51.3°56.8°
C8C10C11C12160.4°180.0°
C10C8C9H161.6°60.2°
C10C8C9H2178.4°59.7°
C10C8C9H358.4°179.8°
C8C10H4H5116.6°120.0°
C8C10C11H679.1°60.0°
C8C10C11H740.0°60.0°
C8N1C13C166.6°180.0°
N1C8C10C1171.0°179.4°
C8N1CC154.3°0.6°
C8N1CO126.3°179.3°
N1C8C9H162.3°179.4°
N1C8C9H257.6°60.6°
N1C8C9H3177.7°59.4°
N1C8C10H450.1°59.4°
N1C8C10H5167.9°60.7°
C8N1C13H11180.0°89.9°
C8N1C13H1260.0°150.0°
C8N1C13H1360.0°30.0°
C13N1CC1111.4°179.3°
C13N1CO68.0°0.7°
N1C13H11H12120.0°120.1°
N1C13H11H13120.0°119.9°
N1C13H12H13120.0°120.0°
C10C11C12H6120.5°120.0°
C10C11C12H7120.5°120.0°
C11C10H4H5116.6°120.0°
C10C11H6H7118.5°120.0°
C10C11C12H8180.0°60.0°
C10C11C12H960.0°60.0°
C10C11C12H1060.0°180.0°
N1CC1C61.1°39.8°
N1CC1O179.4°180.0°
N1CC1C2174.8°139.9°
CN1C13H1113.4°90.0°
CN1C13H12106.6°30.0°
CN1C13H13133.4°150.1°
C6C5C4H15180.0°180.0°
C5C6C1C175.5°179.3°
C5C6C1C20.3°0.4°
C6C5C4C30.4°0.0°
C5C6NH1456.3°40.8°
C6C5C4H16179.6°180.0°
C1C6C5C40.2°0.3°
C6C1CC2175.9°179.6°
C6C1CO178.3°140.2°
C6C1C2C30.7°0.2°
C1C6NH14125.9°139.1°
C1C6C5H15179.8°179.8°
C6C1C2H18179.3°179.9°
C5C4C3H16180.0°179.9°
C5C4C3C20.1°0.1°
C5C4C3H17180.0°179.9°
C12C11C10H439.4°60.0°
C12C11C10H578.5°60.0°
C12C11H6H7118.6°120.0°
C11C12H8H9120.0°120.0°
C11C12H8H10120.0°119.9°
C11C12H9H10120.0°120.0°
CC1C2C3175.5°179.4°
CC1C2H184.5°0.3°
OCC1C25.7°40.2°
C1C2C3C40.5°0.0°
C1C2C3H18180.0°179.7°
C1C2C3H17179.5°180.0°
C4C3C2H17180.0°180.0°
C3C4C5H15179.6°180.0°
C4C3C2H18179.5°179.7°
C2C3C4H16179.9°179.8°
H1C9H2H3120.0°119.9°
H4C10C11H6159.8°180.0°
H4C10C11H781.1°60.0°
H5C10C11H642.0°60.0°
H5C10C11H7161.1°180.0°
H6C11C12H859.5°180.0°
H6C11C12H9179.5°60.0°
H6C11C12H1060.5°60.0°
H7C11C12H859.5°60.0°
H7C11C12H960.5°180.0°
H7C11C12H10179.6°60.0°
H8C12H9H10120.0°120.0°
H11C13H12H13120.0°119.9°
H15C5C4H160.4°0.1°
H16C4C3H170.1°0.1°
H17C3C2H180.5°0.3°

248942

PDB entries from 2026-02-11

PDB statisticsPDBj update infoContact PDBjnumon