ODA

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N	CA	sing	1.47Å	1.44Å
N	H	sing	1.01Å	1.00Å
N	H2	sing	1.01Å	1.00Å
CA	CB	sing	1.60Å	1.53Å
CA	C2	sing	1.49Å	1.53Å
CA	HA	sing	1.09Å	1.10Å
CB	CG	sing	1.60Å	1.50Å
CB	HB2	sing	1.09Å	1.10Å
CB	HB3	sing	1.09Å	1.10Å
CG	CD	sing	1.49Å	1.54Å
CG	HG2	sing	1.09Å	1.10Å
CG	HG3	sing	1.09Å	1.10Å
CD	OE1	doub	1.21Å	1.25Å
CD	NE2	sing	1.29Å	1.35Å
NE2	N2	sing	1.46Å	1.45Å
NE2	CD2	sing	1.45Å	1.47Å
C2	O2	doub	1.21Å	1.25Å
C2	N2	sing	1.29Å	1.33Å
N2	CA2	sing	1.45Å	1.46Å
CA2	CB2	sing	1.53Å	1.54Å
CA2	C	sing	1.51Å	1.52Å
CA2	HA2	sing	1.09Å	1.10Å
CB2	CG2	sing	1.53Å	1.51Å
CB2	HB23	sing	1.09Å	1.10Å
CB2	HB22	sing	1.09Å	1.10Å
CG2	CD2	sing	1.53Å	1.52Å
CG2	HG23	sing	1.09Å	1.10Å
CG2	HG22	sing	1.09Å	1.10Å
CD2	HD22	sing	1.09Å	1.10Å
CD2	HD23	sing	1.09Å	1.10Å
C	O	doub	1.21Å	1.22Å
C	OXT	sing	1.34Å	1.33Å
OXT	HXT	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
CA	N	H	109.5°	111.0°
CA	N	H2	109.5°	111.0°
N	CA	CB	112.9°	109.8°
N	CA	C2	103.5°	109.8°
N	CA	HA	111.9°	109.8°
H	N	H2	109.5°	111.0°
CB	CA	C2	111.5°	107.8°
CB	CA	HA	104.0°	109.8°
CA	CB	CG	112.6°	94.6°
CA	CB	HB2	108.5°	112.3°
CA	CB	HB3	108.4°	112.3°
C2	CA	HA	113.3°	109.8°
CA	C2	O2	121.9°	117.7°
CA	C2	N2	116.6°	124.6°
CG	CB	HB2	108.4°	112.3°
CG	CB	HB3	108.5°	112.3°
CB	CG	CD	113.5°	108.1°
CB	CG	HG2	108.2°	109.8°
CB	CG	HG3	108.2°	109.7°
HB2	CB	HB3	110.4°	111.9°
CD	CG	HG2	108.2°	109.7°
CD	CG	HG3	108.1°	109.7°
CG	CD	OE1	118.6°	118.3°
CG	CD	NE2	118.2°	123.4°
HG2	CG	HG3	110.7°	109.8°
OE1	CD	NE2	123.1°	118.3°
CD	NE2	N2	122.9°	112.2°
CD	NE2	CD2	123.2°	129.5°
N2	NE2	CD2	113.8°	118.3°
NE2	N2	C2	123.1°	112.9°
NE2	N2	CA2	117.9°	118.1°
NE2	CD2	CG2	109.9°	109.7°
NE2	CD2	HD22	109.3°	109.4°
NE2	CD2	HD23	109.3°	109.4°
O2	C2	N2	121.5°	117.7°
C2	N2	CA2	119.0°	129.0°
N2	CA2	CB2	110.8°	109.7°
N2	CA2	C	113.4°	109.4°
N2	CA2	HA2	106.7°	109.4°
CB2	CA2	C	111.9°	109.4°
CB2	CA2	HA2	108.3°	109.4°
CA2	CB2	CG2	115.0°	109.2°
CA2	CB2	HB23	107.7°	109.5°
CA2	CB2	HB22	107.7°	109.5°
C	CA2	HA2	105.3°	109.4°
CA2	C	O	120.6°	120.0°
CA2	C	OXT	116.7°	120.0°
CG2	CB2	HB23	107.7°	109.5°
CG2	CB2	HB22	107.7°	109.5°
CB2	CG2	CD2	110.0°	109.1°
CB2	CG2	HG23	109.3°	109.6°
CB2	CG2	HG22	109.3°	109.6°
HB23	CB2	HB22	111.2°	109.5°
CD2	CG2	HG23	109.3°	109.5°
CD2	CG2	HG22	109.3°	109.5°
CG2	CD2	HD22	109.3°	109.4°
CG2	CD2	HD23	109.3°	109.4°
HG23	CG2	HG22	109.7°	109.5°
HD22	CD2	HD23	109.6°	109.4°
O	C	OXT	122.1°	120.0°
C	OXT	HXT	109.5°	117.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
CA	N	H	H2	120.0°	123.9°
N	CA	CB	C2	116.1°	119.6°
N	CA	CB	HA	121.5°	120.7°
N	CA	C2	HA	121.4°	120.8°
N	CA	CB	CG	165.3°	75.5°
N	CA	CB	HB2	74.7°	168.1°
N	CA	CB	HB3	45.2°	40.9°
N	CA	C2	O2	17.2°	156.9°
N	CA	C2	N2	162.3°	23.2°
H	N	CA	CB	180.0°	54.9°
H	N	CA	C2	59.3°	173.3°
H	N	CA	HA	63.1°	65.8°
H2	N	CA	CB	60.0°	178.9°
H2	N	CA	C2	60.7°	62.7°
H2	N	CA	HA	176.9°	58.1°
CB	CA	C2	HA	116.9°	119.6°
CA	CB	CG	HB2	120.0°	116.4°
CA	CB	CG	HB3	120.0°	116.4°
CA	CB	HB2	HB3	118.7°	127.4°
CA	CB	CG	CD	36.7°	44.4°
CA	CB	CG	HG2	156.8°	75.2°
CA	CB	CG	HG3	83.2°	164.0°
CB	CA	C2	O2	104.5°	83.5°
CB	CA	C2	N2	76.0°	96.4°
C2	CA	CB	CG	49.2°	44.1°
C2	CA	CB	HB2	169.2°	72.2°
C2	CA	CB	HB3	70.9°	160.5°
CA	C2	N2	NE2	2.8°	13.5°
CA	C2	O2	N2	179.5°	180.0°
CA	C2	N2	CA2	177.7°	167.3°
HA	CA	CB	CG	73.3°	163.7°
HA	CA	CB	HB2	46.7°	47.4°
HA	CA	CB	HB3	166.7°	79.8°
HA	CA	C2	O2	138.6°	36.1°
HA	CA	C2	N2	40.9°	144.0°
CG	CB	HB2	HB3	118.7°	127.4°
CB	CG	CD	HG2	120.0°	119.7°
CB	CG	CD	HG3	120.0°	119.6°
CB	CG	HG2	HG3	118.4°	120.7°
CB	CG	CD	OE1	106.3°	80.8°
CB	CG	CD	NE2	71.5°	99.2°
HB2	CB	CG	CD	83.3°	160.8°
HB2	CB	CG	HG2	36.7°	41.2°
HB2	CB	CG	HG3	156.7°	79.6°
HB3	CB	CG	CD	156.7°	72.0°
HB3	CB	CG	HG2	83.2°	168.3°
HB3	CB	CG	HG3	36.8°	47.6°
CD	CG	HG2	HG3	118.3°	120.6°
CG	CD	OE1	NE2	177.6°	180.0°
CG	CD	NE2	N2	5.0°	16.2°
CG	CD	NE2	CD2	179.0°	164.5°
HG2	CG	CD	OE1	13.7°	159.5°
HG2	CG	CD	NE2	168.5°	20.4°
HG3	CG	CD	OE1	133.7°	38.8°
HG3	CG	CD	NE2	48.5°	141.1°
OE1	CD	NE2	N2	172.7°	163.8°
OE1	CD	NE2	CD2	3.3°	15.5°
CD	NE2	N2	CD2	176.4°	179.4°
CD	NE2	N2	C2	46.2°	38.1°
CD	NE2	N2	CA2	133.3°	141.3°
CD	NE2	CD2	CG2	128.0°	137.1°
CD	NE2	CD2	HD22	112.0°	17.0°
CD	NE2	CD2	HD23	8.0°	102.9°
NE2	N2	C2	O2	177.7°	166.5°
NE2	N2	C2	CA2	179.5°	179.3°
NE2	N2	CA2	CB2	42.1°	43.7°
NE2	N2	CA2	C	84.8°	163.7°
NE2	N2	CA2	HA2	159.7°	76.4°
N2	NE2	CD2	CG2	55.6°	43.6°
N2	NE2	CD2	HD22	64.3°	163.7°
N2	NE2	CD2	HD23	175.6°	76.4°
CD2	NE2	N2	C2	130.1°	141.3°
CD2	NE2	N2	CA2	50.4°	39.3°
NE2	CD2	CG2	CB2	56.2°	56.0°
NE2	CD2	CG2	HD22	120.0°	120.1°
NE2	CD2	CG2	HD23	120.0°	120.1°
NE2	CD2	CG2	HG23	63.8°	176.0°
NE2	CD2	CG2	HG22	176.2°	63.9°
NE2	CD2	HD22	HD23	119.8°	119.9°
O2	C2	N2	CA2	1.8°	12.7°
C2	N2	CA2	CB2	138.4°	137.1°
C2	N2	CA2	C	94.7°	17.1°
C2	N2	CA2	HA2	20.7°	102.8°
N2	CA2	CB2	C	127.7°	120.0°
N2	CA2	CB2	HA2	116.7°	120.1°
N2	CA2	C	HA2	116.3°	119.9°
N2	CA2	CB2	CG2	43.5°	56.2°
N2	CA2	CB2	HB23	163.5°	63.7°
N2	CA2	CB2	HB22	76.5°	176.1°
N2	CA2	C	O	22.7°	41.5°
N2	CA2	C	OXT	148.9°	138.5°
CB2	CA2	C	HA2	117.5°	119.9°
CA2	CB2	CG2	HB23	120.0°	119.9°
CA2	CB2	CG2	HB22	120.0°	119.9°
CA2	CB2	HB23	HB22	117.8°	120.1°
CA2	CB2	CG2	CD2	51.7°	63.8°
CA2	CB2	CG2	HG23	68.3°	176.3°
CA2	CB2	CG2	HG22	171.7°	56.0°
CB2	CA2	C	O	103.5°	78.8°
CB2	CA2	C	OXT	84.8°	101.2°
C	CA2	CB2	CG2	84.2°	176.2°
C	CA2	CB2	HB23	35.8°	56.3°
C	CA2	CB2	HB22	155.8°	63.9°
CA2	C	O	OXT	171.1°	180.0°
CA2	C	OXT	HXT	171.5°	179.9°
HA2	CA2	CB2	CG2	160.1°	63.9°
HA2	CA2	CB2	HB23	79.9°	176.2°
HA2	CA2	CB2	HB22	40.2°	56.0°
HA2	CA2	C	O	139.0°	161.4°
HA2	CA2	C	OXT	32.6°	18.7°
CG2	CB2	HB23	HB22	117.8°	120.1°
CB2	CG2	CD2	HG23	120.0°	120.0°
CB2	CG2	CD2	HG22	120.0°	119.9°
CB2	CG2	HG23	HG22	119.8°	120.2°
CB2	CG2	CD2	HD22	63.8°	176.1°
CB2	CG2	CD2	HD23	176.2°	64.0°
HB23	CB2	CG2	CD2	171.7°	56.1°
HB23	CB2	CG2	HG23	51.7°	63.8°
HB23	CB2	CG2	HG22	68.3°	176.0°
HB22	CB2	CG2	CD2	68.2°	176.3°
HB22	CB2	CG2	HG23	171.8°	56.4°
HB22	CB2	CG2	HG22	51.7°	63.9°
CD2	CG2	HG23	HG22	119.8°	120.1°
CG2	CD2	HD22	HD23	119.8°	119.9°
HG23	CG2	CD2	HD22	176.2°	63.9°
HG23	CG2	CD2	HD23	56.2°	55.9°
HG22	CG2	CD2	HD22	56.2°	56.2°
HG22	CG2	CD2	HD23	63.8°	176.1°
O	C	OXT	HXT	0.0°	0.1°

Definition date:	1999-10-14
Last modified:	2023-11-03
Release status:	REL
Processing site:	PDBJ
Derived from:	1D5Z