Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

OCF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1PPdoub1.48Å1.52Å
O3PPsing1.61Å1.55Å
PO2Psing1.61Å1.51Å
PO4Psing1.61Å1.62Å
O4PC5Asing1.43Å1.45Å
C5AC5sing1.51Å1.50Å
OGCBsing1.43Å1.43Å
OGNsing1.42Å1.41Å
C5C6doub1.38Å1.36ÅAromatic
C5C4sing1.40Å1.39ÅAromatic
C4AC4sing1.48Å1.45Å
C4ANdoub1.29Å1.26Å
CBCAsing1.53Å1.53Å
C6N1sing1.32Å1.36ÅAromatic
C4C3doub1.40Å1.40ÅAromatic
N1C2doub1.32Å1.32ÅAromatic
C3C2sing1.39Å1.41ÅAromatic
C3O3sing1.36Å1.36Å
CACsing1.51Å1.53Å
C2C2Asing1.51Å1.49Å
OCdoub1.21Å1.27Å
COXTsing1.34Å1.27Å
C2AH2A1sing1.09Å1.10Å
C2AH2A2sing1.09Å1.10Å
C2AH2A3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C6H6sing1.08Å1.08Å
C5AH5A1sing1.09Å1.10Å
C5AH5A2sing1.09Å1.10Å
O2PHOP2sing0.97Å0.95Å
O3PHOP3sing0.97Å0.95Å
CBHB1sing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
CAHA1sing1.09Å1.10Å
CAHA2sing1.09Å1.10Å
OXTHOXTsing0.97Å0.95Å
C4AH4Asing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1PPO3P112.1°109.5°
O1PPO2P114.5°109.5°
O1PPO4P104.8°109.5°
O3PPO2P114.1°109.5°
O3PPO4P107.0°109.5°
PO3PHOP3109.5°114.0°
O2PPO4P103.2°109.5°
PO2PHOP2109.5°114.0°
PO4PC5A121.9°123.0°
O4PC5AC5106.0°109.5°
O4PC5AH5A1110.4°109.5°
O4PC5AH5A2110.3°109.5°
C5AC5C6121.8°120.5°
C5AC5C4120.2°120.5°
C5C5AH5A1110.3°109.4°
C5C5AH5A2110.3°109.4°
CBOGN109.7°114.1°
OGCBCA109.2°109.5°
OGCBHB1109.5°109.4°
OGCBHB2109.5°109.5°
OGNC4A109.8°120.0°
C6C5C4117.9°119.0°
C5C6N1123.2°121.0°
C5C6H6118.4°119.5°
C5C4C4A118.5°120.9°
C5C4C3119.3°118.1°
C4C4AN121.9°120.0°
C4AC4C3122.2°120.9°
C4C4AH4A119.1°120.0°
NC4AH4A119.1°120.0°
CBCAC118.9°109.5°
CACBHB1109.5°109.5°
CACBHB2109.5°109.4°
CBCAHA1107.1°109.4°
CBCAHA2107.1°109.5°
C6N1C2119.8°122.2°
N1C6H6118.4°119.5°
C4C3C2119.0°118.8°
C4C3O3121.6°120.6°
N1C2C3120.6°120.8°
N1C2C2A118.3°119.6°
C2C3O3119.3°120.6°
C3C2C2A121.0°119.6°
C3O3HO3109.5°114.0°
CACO119.6°120.0°
CACOXT117.4°120.0°
CCAHA1107.1°109.5°
CCAHA2107.1°109.5°
C2C2AH2A1109.5°109.5°
C2C2AH2A2109.4°109.4°
C2C2AH2A3109.5°109.4°
OCOXT123.0°120.0°
COXTHOXT109.5°117.0°
H2A1C2AH2A2109.4°109.5°
H2A1C2AH2A3109.5°109.5°
H2A2C2AH2A3109.5°109.5°
H5A1C5AH5A2109.5°109.5°
HB1CBHB2109.5°109.4°
HA1CAHA2109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1PPO3PO2P132.2°120.0°
O1PPO3PO4P114.3°120.0°
O1PPO2PO4P113.3°120.0°
O1PPO4PC5A171.9°55.0°
O1PPO2PHOP20.0°180.0°
O1PPO3PHOP30.0°60.0°
O3PPO2PO4P115.7°120.0°
O3PPO4PC5A52.8°175.0°
O3PPO2PHOP2131.0°60.0°
O2PPO4PC5A67.9°65.0°
O2PPO3PHOP3132.2°60.0°
PO4PC5AC5149.4°180.0°
PO4PC5AH5A191.2°60.0°
PO4PC5AH5A229.9°60.0°
O4PPO2PHOP2113.3°60.0°
O4PPO3PHOP3114.4°180.0°
O4PC5AC5H5A1119.5°120.0°
O4PC5AC5H5A2119.5°120.0°
O4PC5AC5C6110.9°0.0°
O4PC5AC5C466.2°180.0°
O4PC5AH5A1H5A2121.6°120.1°
C5AC5C6C4177.1°180.0°
C5AC5C4C4A0.0°0.0°
C5AC5C6N1178.6°180.0°
C5AC5C4C3179.9°180.0°
C5AC5C6H61.4°0.0°
C5C5AH5A1H5A2121.6°120.0°
CBOGNC4A134.5°180.0°
OGCBCAHB1120.0°120.0°
OGCBCAHB2120.0°120.0°
OGCBCAC60.7°180.0°
OGCBHB1HB2120.1°120.0°
OGCBCAHA160.6°60.0°
OGCBCAHA2177.9°60.0°
OGNC4AC4177.0°180.0°
NOGCBCA40.1°180.0°
NOGCBHB179.9°60.0°
NOGCBHB2160.1°60.0°
OGNC4AH4A3.0°0.1°
C6C5C4C4A177.2°180.0°
C5C6N1H6180.0°180.0°
C6C5C4C32.9°0.0°
C5C6N1C22.0°0.0°
C6C5C5AH5A18.6°120.0°
C6C5C5AH5A2129.7°120.0°
C5C4C4AC3179.9°180.0°
C5C4C4AN141.7°179.9°
C4C5C6N14.2°0.0°
C5C4C3C20.4°0.0°
C5C4C3O3177.8°180.0°
C4C5C6H6175.8°180.0°
C4C5C5AH5A1174.3°60.0°
C4C5C5AH5A253.3°60.0°
C5C4C4AH4A38.3°0.0°
C4C4ANH4A180.0°179.9°
C4AC4C3C2179.5°180.0°
C4AC4C3O32.1°0.0°
NC4AC4C338.2°0.1°
CBCACHA1121.4°120.0°
CBCACHA2121.4°120.0°
CBCACO59.0°0.0°
CBCACOXT122.5°180.0°
CACBHB1HB2120.1°120.0°
CBCAHA1HA2115.7°120.0°
C6N1C2C31.5°0.0°
C6N1C2C2A178.3°180.0°
C4C3C2N12.7°0.0°
C4C3C2O3177.5°179.9°
C4C3C2C2A179.4°179.9°
C4C3O3HO3180.0°90.0°
C3C4C4AH4A141.8°180.0°
N1C2C3C2A176.7°180.0°
N1C2C3O3179.8°180.0°
N1C2C2AH2A10.0°90.0°
N1C2C2AH2A2120.0°150.0°
N1C2C2AH2A3120.0°30.1°
C2N1C6H6178.0°180.0°
C3C2C2AH2A1176.8°90.0°
C3C2C2AH2A263.2°30.0°
C3C2C2AH2A356.8°150.0°
C2C3O3HO32.6°90.0°
O3C3C2C2A3.1°0.0°
CACOOXT178.5°180.0°
CCACBHB1179.3°60.0°
CCACBHB259.2°60.0°
CCAHA1HA2115.7°120.0°
CACOXTHOXT178.5°180.0°
C2C2AH2A1H2A2120.0°120.0°
C2C2AH2A1H2A3120.0°120.0°
C2C2AH2A2H2A3120.0°119.9°
OCCAHA1179.7°120.0°
OCCAHA262.4°120.0°
OCOXTHOXT0.0°0.0°
OXTCCAHA11.1°60.0°
OXTCCAHA2116.1°60.0°
H2A1C2AH2A2H2A3120.0°120.1°
HB1CBCAHA159.3°180.0°
HB1CBCAHA257.9°60.0°
HB2CBCAHA1179.4°60.0°
HB2CBCAHA262.1°180.0°

248335

PDB entries from 2026-01-28

PDB statisticsPDBj update infoContact PDBjnumon