OBS
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O4 | C11 | doub | 1.22Å | 1.25Å | |
C11 | O3 | sing | 1.36Å | 1.27Å | |
C11 | C10 | sing | 1.51Å | 1.51Å | |
O3 | H3 | sing | 0.98Å | 0.95Å | |
C10 | C9 | sing | 1.52Å | 1.53Å | |
C10 | H101 | sing | 1.10Å | 1.10Å | |
C10 | H102 | sing | 1.10Å | 1.10Å | |
C9 | C8 | sing | 1.53Å | 1.55Å | |
C9 | H9C1 | sing | 1.09Å | 1.10Å | |
C9 | H9C2 | sing | 1.09Å | 1.10Å | |
C8 | C7 | sing | 1.54Å | 1.55Å | |
C8 | C3 | sing | 1.55Å | 1.57Å | |
C8 | H8 | sing | 1.10Å | 1.10Å | |
C7 | S6 | sing | 1.83Å | 1.81Å | |
C7 | H7C1 | sing | 1.10Å | 1.10Å | |
C7 | H7C2 | sing | 1.10Å | 1.10Å | |
C5 | C4 | sing | 1.51Å | 1.51Å | |
C5 | S6 | sing | 1.81Å | 1.78Å | |
C5 | H5C1 | sing | 1.09Å | 1.10Å | |
C5 | H5C2 | sing | 1.09Å | 1.10Å | |
C3 | C2 | sing | 1.53Å | 1.54Å | |
C3 | C4 | sing | 1.52Å | 1.54Å | |
C3 | HB | sing | 1.10Å | 1.10Å | |
C2 | C1 | sing | 1.50Å | 1.50Å | |
C2 | H2C1 | sing | 1.09Å | 1.10Å | |
C2 | H2C2 | sing | 1.09Å | 1.10Å | |
C1 | O1 | doub | 1.22Å | 1.23Å | |
C1 | O2 | sing | 1.36Å | 1.24Å | |
O2 | H1 | sing | 0.98Å | 0.95Å | |
C4 | NZ | doub | 1.29Å | 1.30Å | |
NZ | CE | sing | 1.45Å | 1.46Å | |
CE | CD | sing | 1.53Å | 1.54Å | |
CE | HEC1 | sing | 1.09Å | 1.10Å | |
CE | HEC2 | sing | 1.09Å | 1.10Å | |
CD | CG | sing | 1.53Å | 1.54Å | |
CD | HDC1 | sing | 1.10Å | 1.10Å | |
CD | HDC2 | sing | 1.10Å | 1.10Å | |
CG | CB | sing | 1.54Å | 1.54Å | |
CG | HGC1 | sing | 1.10Å | 1.10Å | |
CG | HGC2 | sing | 1.10Å | 1.10Å | |
CB | CA | sing | 1.54Å | 1.52Å | |
CB | HBC1 | sing | 1.10Å | 1.10Å | |
CB | HBC2 | sing | 1.10Å | 1.10Å | |
CA | N | sing | 1.46Å | 1.45Å | |
CA | C | sing | 1.52Å | 1.52Å | |
CA | HA | sing | 1.10Å | 1.10Å | |
N | H | sing | 1.00Å | 1.00Å | |
N | H2 | sing | 1.00Å | 1.00Å | |
C | O | doub | 1.22Å | 1.23Å | |
C | OXT | sing | 1.36Å | 121.86Å | |
OXT | HXT | sing | 0.98Å | 0.95Å | |
S6 | O5 | doub | 1.61Å | 1.79Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O4 | C11 | O3 | 122.3° | 123.3° |
O4 | C11 | C10 | 116.8° | 123.8° |
O3 | C11 | C10 | 120.9° | 112.9° |
C11 | O3 | H3 | 109.5° | 115.5° |
C11 | C10 | C9 | 110.3° | 111.9° |
C11 | C10 | H101 | 109.0° | 110.6° |
C11 | C10 | H102 | 109.2° | 106.9° |
C9 | C10 | H101 | 109.0° | 111.7° |
C9 | C10 | H102 | 109.2° | 109.6° |
C10 | C9 | C8 | 113.5° | 112.4° |
C10 | C9 | H9C1 | 107.2° | 109.1° |
C10 | C9 | H9C2 | 108.2° | 110.7° |
H101 | C10 | H102 | 110.1° | 105.8° |
C8 | C9 | H9C1 | 107.2° | 108.1° |
C8 | C9 | H9C2 | 108.1° | 108.7° |
C9 | C8 | C7 | 110.4° | 109.9° |
C9 | C8 | C3 | 111.6° | 111.9° |
C9 | C8 | H8 | 110.1° | 106.5° |
H9C1 | C9 | H9C2 | 112.7° | 107.6° |
C7 | C8 | C3 | 116.3° | 113.0° |
C7 | C8 | H8 | 104.6° | 107.9° |
C8 | C7 | S6 | 114.7° | 110.0° |
C8 | C7 | H7C1 | 106.6° | 111.2° |
C8 | C7 | H7C2 | 107.8° | 110.6° |
C3 | C8 | H8 | 103.3° | 107.3° |
C8 | C3 | C2 | 113.1° | 115.2° |
C8 | C3 | C4 | 108.9° | 110.0° |
C8 | C3 | HB | 109.2° | 107.9° |
S6 | C7 | H7C1 | 106.6° | 110.1° |
S6 | C7 | H7C2 | 107.8° | 106.6° |
C7 | S6 | C5 | 104.8° | 94.7° |
C7 | S6 | O5 | 109.2° | 93.6° |
H7C1 | C7 | H7C2 | 113.7° | 108.1° |
C4 | C5 | S6 | 103.9° | 109.0° |
C4 | C5 | H5C1 | 112.6° | 110.7° |
C4 | C5 | H5C2 | 111.4° | 109.2° |
C5 | C4 | C3 | 119.4° | 118.8° |
C5 | C4 | NZ | 116.1° | 119.6° |
S6 | C5 | H5C1 | 112.5° | 108.2° |
S6 | C5 | H5C2 | 111.3° | 110.7° |
C5 | S6 | O5 | 100.8° | 93.8° |
H5C1 | C5 | H5C2 | 105.3° | 109.1° |
C2 | C3 | C4 | 114.3° | 109.2° |
C2 | C3 | HB | 103.1° | 106.9° |
C3 | C2 | C1 | 105.5° | 111.6° |
C3 | C2 | H2C1 | 111.7° | 108.8° |
C3 | C2 | H2C2 | 110.8° | 108.9° |
C4 | C3 | HB | 107.8° | 107.4° |
C3 | C4 | NZ | 123.9° | 121.7° |
C1 | C2 | H2C1 | 111.7° | 108.9° |
C1 | C2 | H2C2 | 110.8° | 108.9° |
C2 | C1 | O1 | 120.4° | 126.6° |
C2 | C1 | O2 | 117.4° | 109.7° |
H2C1 | C2 | H2C2 | 106.5° | 109.6° |
O1 | C1 | O2 | 122.1° | 123.8° |
C1 | O2 | H1 | 109.5° | 111.9° |
C4 | NZ | CE | 129.7° | 114.3° |
NZ | CE | CD | 109.9° | 109.9° |
NZ | CE | HEC1 | 109.2° | 109.7° |
NZ | CE | HEC2 | 109.3° | 108.7° |
CD | CE | HEC1 | 109.3° | 111.0° |
CD | CE | HEC2 | 109.3° | 109.7° |
CE | CD | CG | 105.9° | 112.5° |
CE | CD | HDC1 | 111.4° | 108.6° |
CE | CD | HDC2 | 110.6° | 109.7° |
HEC1 | CE | HEC2 | 109.8° | 107.9° |
CG | CD | HDC1 | 111.5° | 109.1° |
CG | CD | HDC2 | 110.7° | 109.6° |
CD | CG | CB | 110.0° | 111.0° |
CD | CG | HGC1 | 109.2° | 109.6° |
CD | CG | HGC2 | 109.3° | 109.1° |
HDC1 | CD | HDC2 | 106.8° | 107.2° |
CB | CG | HGC1 | 109.2° | 109.9° |
CB | CG | HGC2 | 109.3° | 109.9° |
CG | CB | CA | 111.4° | 114.5° |
CG | CB | HBC1 | 108.4° | 108.8° |
CG | CB | HBC2 | 108.8° | 108.9° |
HGC1 | CG | HGC2 | 109.9° | 107.3° |
CA | CB | HBC1 | 108.4° | 109.1° |
CA | CB | HBC2 | 108.8° | 108.9° |
CB | CA | N | 109.4° | 111.5° |
CB | CA | C | 111.1° | 112.2° |
CB | CA | HA | 107.0° | 109.3° |
HBC1 | CB | HBC2 | 111.0° | 106.2° |
N | CA | C | 104.8° | 108.3° |
N | CA | HA | 113.1° | 107.8° |
CA | N | H | 109.5° | 118.0° |
CA | N | H2 | 109.5° | 118.0° |
C | CA | HA | 111.5° | 107.5° |
CA | C | O | 123.3° | 126.3° |
CA | C | OXT | 156.2° | 110.5° |
H | N | H2 | 109.5° | 122.6° |
O | C | OXT | 64.5° | 123.3° |
C | OXT | HXT | 156.1° | 111.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O4 | C11 | O3 | C10 | 177.9° | 178.7° |
O4 | C11 | O3 | H3 | 0.0° | 0.0° |
O4 | C11 | C10 | C9 | 164.2° | 5.3° |
O4 | C11 | C10 | H101 | 76.1° | 120.0° |
O4 | C11 | C10 | H102 | 44.2° | 125.3° |
O3 | C11 | C10 | C9 | 17.8° | 176.0° |
O3 | C11 | C10 | H101 | 101.9° | 58.7° |
O3 | C11 | C10 | H102 | 137.8° | 56.0° |
C10 | C11 | O3 | H3 | 177.9° | 178.8° |
C11 | C10 | C9 | H101 | 119.7° | 124.7° |
C11 | C10 | C9 | H102 | 120.0° | 118.4° |
C11 | C10 | H101 | H102 | 119.8° | 115.4° |
C11 | C10 | C9 | C8 | 175.7° | 180.0° |
C11 | C10 | C9 | H9C1 | 66.1° | 60.0° |
C11 | C10 | C9 | H9C2 | 55.7° | 58.2° |
C9 | C10 | H101 | H102 | 119.8° | 119.2° |
C10 | C9 | C8 | H9C1 | 118.2° | 120.5° |
C10 | C9 | C8 | H9C2 | 120.0° | 123.0° |
C10 | C9 | H9C1 | H9C2 | 118.9° | 120.2° |
C10 | C9 | C8 | C7 | 67.2° | 179.4° |
C10 | C9 | C8 | C3 | 161.8° | 53.0° |
C10 | C9 | C8 | H8 | 47.7° | 64.0° |
H101 | C10 | C9 | C8 | 56.1° | 55.3° |
H101 | C10 | C9 | H9C1 | 174.3° | 175.3° |
H101 | C10 | C9 | H9C2 | 63.9° | 66.5° |
H102 | C10 | C9 | C8 | 64.3° | 61.6° |
H102 | C10 | C9 | H9C1 | 53.9° | 58.3° |
H102 | C10 | C9 | H9C2 | 175.7° | 176.5° |
C8 | C9 | H9C1 | H9C2 | 118.8° | 117.2° |
C9 | C8 | C7 | C3 | 128.4° | 125.8° |
C9 | C8 | C7 | H8 | 118.4° | 115.7° |
C9 | C8 | C3 | H8 | 118.2° | 116.5° |
C9 | C8 | C7 | S6 | 172.9° | 168.1° |
C9 | C8 | C7 | H7C1 | 69.4° | 69.6° |
C9 | C8 | C7 | H7C2 | 52.9° | 50.6° |
C9 | C8 | C3 | C2 | 47.0° | 54.4° |
C9 | C8 | C3 | C4 | 175.3° | 178.3° |
C9 | C8 | C3 | HB | 67.2° | 64.9° |
H9C1 | C9 | C8 | C7 | 51.0° | 60.1° |
H9C1 | C9 | C8 | C3 | 80.0° | 173.5° |
H9C1 | C9 | C8 | H8 | 166.0° | 56.5° |
H9C2 | C9 | C8 | C7 | 172.8° | 56.4° |
H9C2 | C9 | C8 | C3 | 41.8° | 70.0° |
H9C2 | C9 | C8 | H8 | 72.3° | 173.0° |
C7 | C8 | C3 | H8 | 113.9° | 118.8° |
C8 | C7 | S6 | H7C1 | 117.7° | 122.9° |
C8 | C7 | S6 | H7C2 | 120.0° | 120.0° |
C8 | C7 | H7C1 | H7C2 | 118.5° | 121.7° |
C8 | C7 | S6 | C5 | 46.1° | 64.1° |
C7 | C8 | C3 | C2 | 80.9° | 70.3° |
C7 | C8 | C3 | C4 | 47.4° | 53.6° |
C7 | C8 | C3 | HB | 164.9° | 170.5° |
C8 | C7 | S6 | O5 | 153.4° | 158.2° |
C3 | C8 | C7 | S6 | 44.5° | 66.1° |
C3 | C8 | C7 | H7C1 | 162.2° | 56.2° |
C3 | C8 | C7 | H7C2 | 75.5° | 176.4° |
C8 | C3 | C4 | C5 | 65.2° | 53.8° |
C8 | C3 | C2 | C4 | 125.4° | 124.3° |
C8 | C3 | C2 | HB | 117.9° | 119.8° |
C8 | C3 | C4 | HB | 118.4° | 117.2° |
C8 | C3 | C2 | C1 | 174.5° | 176.0° |
C8 | C3 | C2 | H2C1 | 52.9° | 55.7° |
C8 | C3 | C2 | H2C2 | 65.5° | 63.7° |
C8 | C3 | C4 | NZ | 105.9° | 127.1° |
H8 | C8 | C7 | S6 | 68.7° | 52.4° |
H8 | C8 | C7 | H7C1 | 49.0° | 174.6° |
H8 | C8 | C7 | H7C2 | 171.4° | 65.2° |
H8 | C8 | C3 | C2 | 165.3° | 170.9° |
H8 | C8 | C3 | C4 | 66.5° | 65.2° |
H8 | C8 | C3 | HB | 51.0° | 51.7° |
S6 | C7 | H7C1 | H7C2 | 118.6° | 116.1° |
C7 | S6 | C5 | C4 | 52.9° | 60.2° |
C7 | S6 | C5 | O5 | 113.4° | 93.9° |
C7 | S6 | C5 | H5C1 | 69.1° | 179.4° |
C7 | S6 | C5 | H5C2 | 172.9° | 59.9° |
H7C1 | C7 | S6 | C5 | 163.7° | 58.8° |
H7C1 | C7 | S6 | O5 | 88.9° | 35.3° |
H7C2 | C7 | S6 | C5 | 73.9° | 175.9° |
H7C2 | C7 | S6 | O5 | 33.4° | 81.8° |
C4 | C5 | S6 | H5C1 | 122.1° | 120.4° |
C4 | C5 | S6 | H5C2 | 120.0° | 120.1° |
C4 | C5 | H5C1 | H5C2 | 121.5° | 120.1° |
C5 | C4 | C3 | C2 | 62.3° | 73.4° |
C5 | C4 | C3 | NZ | 171.2° | 179.0° |
C5 | C4 | C3 | HB | 176.4° | 171.0° |
C5 | C4 | NZ | CE | 178.3° | 179.8° |
C4 | C5 | S6 | O5 | 166.3° | 154.1° |
S6 | C5 | H5C1 | H5C2 | 121.5° | 120.5° |
S6 | C5 | C4 | C3 | 69.6° | 62.8° |
S6 | C5 | C4 | NZ | 102.3° | 118.1° |
H5C1 | C5 | C4 | C3 | 52.5° | 178.3° |
H5C1 | C5 | C4 | NZ | 135.7° | 0.8° |
H5C1 | C5 | S6 | O5 | 44.2° | 85.4° |
H5C2 | C5 | C4 | C3 | 170.4° | 58.2° |
H5C2 | C5 | C4 | NZ | 17.7° | 120.9° |
H5C2 | C5 | S6 | O5 | 73.7° | 34.0° |
C2 | C3 | C4 | HB | 114.0° | 115.6° |
C3 | C2 | C1 | H2C1 | 121.5° | 120.2° |
C3 | C2 | C1 | H2C2 | 120.0° | 120.3° |
C3 | C2 | H2C1 | H2C2 | 121.1° | 119.0° |
C3 | C2 | C1 | O1 | 158.5° | 120.2° |
C3 | C2 | C1 | O2 | 23.1° | 59.8° |
C2 | C3 | C4 | NZ | 126.5° | 105.6° |
C4 | C3 | C2 | C1 | 49.1° | 59.7° |
C4 | C3 | C2 | H2C1 | 72.4° | 180.0° |
C4 | C3 | C2 | H2C2 | 169.1° | 60.6° |
C3 | C4 | NZ | CE | 10.3° | 0.8° |
HB | C3 | C2 | C1 | 67.7° | 56.2° |
HB | C3 | C2 | H2C1 | 170.8° | 64.1° |
HB | C3 | C2 | H2C2 | 52.3° | 176.5° |
HB | C3 | C4 | NZ | 12.5° | 9.9° |
C1 | C2 | H2C1 | H2C2 | 121.1° | 119.1° |
C2 | C1 | O1 | O2 | 178.3° | 180.0° |
C2 | C1 | O2 | H1 | 178.4° | 180.0° |
H2C1 | C2 | C1 | O1 | 80.0° | 0.0° |
H2C1 | C2 | C1 | O2 | 98.4° | 180.0° |
H2C2 | C2 | C1 | O1 | 38.5° | 119.5° |
H2C2 | C2 | C1 | O2 | 143.1° | 60.5° |
O1 | C1 | O2 | H1 | 0.0° | 0.0° |
C4 | NZ | CE | CD | 169.0° | 177.8° |
C4 | NZ | CE | HEC1 | 71.2° | 60.0° |
C4 | NZ | CE | HEC2 | 49.0° | 57.8° |
NZ | CE | CD | HEC1 | 119.8° | 121.4° |
NZ | CE | CD | HEC2 | 120.0° | 119.5° |
NZ | CE | HEC1 | HEC2 | 119.9° | 118.3° |
NZ | CE | CD | CG | 176.3° | 61.4° |
NZ | CE | CD | HDC1 | 55.0° | 177.7° |
NZ | CE | CD | HDC2 | 63.7° | 60.8° |
CD | CE | HEC1 | HEC2 | 119.9° | 120.2° |
CE | CD | CG | HDC1 | 121.4° | 120.5° |
CE | CD | CG | HDC2 | 120.0° | 122.3° |
CE | CD | HDC1 | HDC2 | 120.9° | 118.5° |
CE | CD | CG | CB | 174.3° | 179.4° |
CE | CD | CG | HGC1 | 65.9° | 57.9° |
CE | CD | CG | HGC2 | 54.3° | 59.3° |
HEC1 | CE | CD | CG | 63.8° | 60.0° |
HEC1 | CE | CD | HDC1 | 174.8° | 60.9° |
HEC1 | CE | CD | HDC2 | 56.1° | 177.7° |
HEC2 | CE | CD | CG | 56.3° | 179.1° |
HEC2 | CE | CD | HDC1 | 65.0° | 58.2° |
HEC2 | CE | CD | HDC2 | 176.3° | 58.6° |
CG | CD | HDC1 | HDC2 | 121.0° | 118.6° |
CD | CG | CB | HGC1 | 119.8° | 121.3° |
CD | CG | CB | HGC2 | 120.0° | 120.8° |
CD | CG | HGC1 | HGC2 | 119.9° | 118.4° |
CD | CG | CB | CA | 175.3° | 177.6° |
CD | CG | CB | HBC1 | 56.1° | 60.0° |
CD | CG | CB | HBC2 | 64.7° | 55.4° |
HDC1 | CD | CG | CB | 53.0° | 60.0° |
HDC1 | CD | CG | HGC1 | 172.8° | 178.5° |
HDC1 | CD | CG | HGC2 | 67.0° | 61.3° |
HDC2 | CD | CG | CB | 65.7° | 57.1° |
HDC2 | CD | CG | HGC1 | 54.1° | 64.4° |
HDC2 | CD | CG | HGC2 | 174.3° | 178.4° |
CB | CG | HGC1 | HGC2 | 119.9° | 119.4° |
CG | CB | CA | HBC1 | 119.2° | 122.2° |
CG | CB | CA | HBC2 | 120.0° | 122.2° |
CG | CB | HBC1 | HBC2 | 119.5° | 117.1° |
CG | CB | CA | N | 176.6° | 60.5° |
CG | CB | CA | C | 61.4° | 177.8° |
CG | CB | CA | HA | 60.5° | 58.6° |
HGC1 | CG | CB | CA | 64.9° | 56.3° |
HGC1 | CG | CB | HBC1 | 175.9° | 178.7° |
HGC1 | CG | CB | HBC2 | 55.1° | 65.9° |
HGC2 | CG | CB | CA | 55.3° | 61.5° |
HGC2 | CG | CB | HBC1 | 63.9° | 60.9° |
HGC2 | CG | CB | HBC2 | 175.3° | 176.3° |
CA | CB | HBC1 | HBC2 | 119.5° | 117.3° |
CB | CA | N | C | 119.2° | 123.9° |
CB | CA | N | HA | 119.2° | 120.0° |
CB | CA | C | HA | 119.2° | 120.3° |
CB | CA | N | H | 99.7° | 138.8° |
CB | CA | N | H2 | 20.3° | 27.8° |
CB | CA | C | O | 55.2° | 119.8° |
CB | CA | C | OXT | 47.0° | 61.0° |
HBC1 | CB | CA | N | 64.3° | 61.7° |
HBC1 | CB | CA | C | 179.5° | 60.0° |
HBC1 | CB | CA | HA | 58.6° | 179.2° |
HBC2 | CB | CA | N | 56.5° | 177.2° |
HBC2 | CB | CA | C | 58.7° | 55.6° |
HBC2 | CB | CA | HA | 179.4° | 63.6° |
N | CA | C | HA | 122.7° | 116.2° |
CA | N | H | H2 | 120.1° | 166.0° |
N | CA | C | O | 62.9° | 3.8° |
N | CA | C | OXT | 165.1° | 175.5° |
C | CA | N | H | 141.1° | 97.2° |
C | CA | N | H2 | 98.8° | 96.1° |
CA | C | O | OXT | 154.0° | 179.1° |
CA | C | OXT | HXT | 180.0° | 179.2° |
HA | CA | N | H | 19.5° | 18.8° |
HA | CA | N | H2 | 139.5° | 147.9° |
HA | CA | C | O | 174.4° | 120.0° |
HA | CA | C | OXT | 72.2° | 59.3° |
O | C | OXT | HXT | 64.9° | 0.1° |