Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

OB2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O01C03sing1.36Å1.36Å
C03C02doub1.39Å1.42ÅAromatic
C03C04sing1.39Å1.41ÅAromatic
C02C01sing1.38Å1.41ÅAromatic
C04C05doub1.38Å1.41ÅAromatic
C01C06doub1.40Å1.41ÅAromatic
C05C06sing1.40Å1.42ÅAromatic
C06C07sing1.47Å1.34Å
C07C08doub1.36Å1.36Å
C07C16sing1.53Å1.42Å
C13C14doub1.38Å1.41ÅAromatic
C13C12sing1.39Å1.41ÅAromatic
O02C12sing1.36Å1.35Å
C14C09sing1.40Å1.42ÅAromatic
C12C11doub1.39Å1.42ÅAromatic
C09C08sing1.47Å1.35Å
C09C10doub1.40Å1.41ÅAromatic
C11C10sing1.38Å1.40ÅAromatic
C08C15sing1.53Å1.40Å
C16O03sing1.47Å1.43Å
C16C17sing1.56Å1.53Å
O03C15sing1.47Å1.43Å
C15C18sing1.56Å1.52Å
C17C18sing1.55Å1.53Å
C18S01sing1.81Å1.92Å
S01O04doub1.42Å1.53Å
S01N01sing1.66Å1.66Å
S01O05doub1.42Å1.53Å
C19N01sing1.46Å1.48Å
N01C20sing1.40Å1.35Å
C21C20doub1.39Å1.42ÅAromatic
C21C22sing1.38Å1.42ÅAromatic
C20C25sing1.39Å1.43ÅAromatic
C22C23doub1.38Å1.41ÅAromatic
C25C24doub1.38Å1.40ÅAromatic
C23C24sing1.38Å1.41ÅAromatic
C01H1sing1.08Å1.08Å
C02H2sing1.08Å1.08Å
O01H3sing0.97Å0.95Å
C04H4sing1.08Å1.08Å
C05H5sing1.08Å1.08Å
C10H6sing1.08Å1.08Å
C11H7sing1.08Å1.08Å
O02H8sing0.97Å0.95Å
C13H9sing1.08Å1.08Å
C14H10sing1.08Å1.08Å
C15H11sing1.09Å1.10Å
C16H12sing1.09Å1.10Å
C17H13sing1.09Å1.10Å
C17H14sing1.09Å1.10Å
C18H15sing1.09Å1.10Å
C19H16sing1.09Å1.10Å
C19H17sing1.09Å1.10Å
C19H18sing1.09Å1.10Å
C21H19sing1.08Å1.08Å
C22H20sing1.08Å1.08Å
C23H21sing1.08Å1.08Å
C24H22sing1.08Å1.08Å
C25H23sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O01C03C02120.0°119.9°
O01C03C04118.3°119.9°
C03O01H3109.5°113.9°
C02C03C04121.8°120.2°
C03C02C01119.7°120.1°
C03C02H2120.2°120.0°
C03C04C05118.6°120.0°
C03C04H4120.7°120.0°
C02C01C06118.7°119.9°
C02C01H1120.7°120.1°
C01C02H2120.2°119.9°
C04C05C06120.1°120.0°
C05C04H4120.7°120.0°
C04C05H5120.0°120.0°
C01C06C05121.3°119.8°
C01C06C07122.7°120.1°
C06C01H1120.7°120.0°
C05C06C07116.0°120.2°
C06C05H5120.0°120.0°
C06C07C08132.6°127.0°
C06C07C16121.4°127.0°
C08C07C16106.0°106.0°
C07C08C09134.2°127.1°
C07C08C15105.2°106.0°
C07C16O03101.2°100.5°
C07C16C17113.4°105.1°
C07C16H12115.1°115.7°
C14C13C12119.4°120.1°
C13C14C09119.2°119.9°
C14C13H9120.3°119.9°
C13C14H10120.4°120.0°
C13C12O02119.6°119.9°
C13C12C11121.2°120.2°
C12C13H9120.3°120.0°
O02C12C11119.2°119.9°
C12O02H8109.5°114.1°
C14C09C08120.0°120.1°
C14C09C10120.9°119.8°
C09C14H10120.4°120.0°
C12C11C10119.5°120.1°
C12C11H7120.3°120.0°
C08C09C10118.9°120.1°
C09C08C15120.4°127.0°
C09C10C11119.7°119.9°
C09C10H6120.1°120.0°
C11C10H6120.1°120.1°
C10C11H7120.3°119.9°
C08C15O03101.8°100.6°
C08C15C18102.9°105.1°
C08C15H11116.9°115.7°
O03C16C1796.9°101.2°
C16O03C1595.6°96.9°
O03C16H12115.0°115.9°
C16C17C1898.3°102.0°
C17C16H12113.3°116.2°
C16C17H13112.2°110.9°
C16C17H14112.2°110.9°
O03C15C18102.4°101.1°
O03C15H11116.3°116.6°
C15C18C17101.8°102.1°
C15C18S01109.9°110.9°
C18C15H11114.5°115.6°
C15C18H15112.4°111.0°
C17C18S01112.9°111.0°
C18C17H13112.2°111.1°
C18C17H14112.2°110.8°
C17C18H15112.3°110.6°
C18S01O04108.2°110.6°
C18S01N01107.9°104.5°
C18S01O05107.0°110.5°
S01C18H15107.5°110.9°
O04S01N01109.6°104.3°
O04S01O05111.9°121.0°
N01S01O05112.0°104.3°
S01N01C19116.1°120.0°
S01N01C20123.5°120.0°
C19N01C20120.4°120.0°
N01C19H16109.5°109.5°
N01C19H17109.5°109.5°
N01C19H18109.4°109.5°
N01C20C21118.9°120.1°
N01C20C25122.9°120.0°
C20C21C22120.7°119.9°
C21C20C25118.2°119.9°
C20C21H19119.7°120.1°
C21C22C23119.4°120.1°
C22C21H19119.6°120.1°
C21C22H20120.3°119.9°
C20C25C24121.4°119.9°
C20C25H23119.3°120.1°
C22C23C24120.9°120.1°
C23C22H20120.3°120.0°
C22C23H21119.5°119.9°
C25C24C23119.3°120.1°
C25C24H22120.3°120.0°
C24C25H23119.3°120.0°
C24C23H21119.5°120.0°
C23C24H22120.3°119.9°
H13C17H14109.4°110.8°
H16C19H17109.5°109.4°
H16C19H18109.5°109.5°
H17C19H18109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O01C03C02C04179.9°180.0°
O01C03C02C01179.8°179.9°
O01C03C04C05180.0°180.0°
O01C03C02H20.2°0.0°
O01C03C04H40.0°0.0°
C03C02C01H2180.0°180.0°
C02C03C04C050.1°0.0°
C03C02C01C060.0°0.0°
C03C02C01H1179.9°179.7°
C02C03O01H3180.0°90.0°
C02C03C04H4179.9°180.0°
C04C03C02C010.2°0.1°
C03C04C05H4180.0°180.0°
C03C04C05C060.6°0.0°
C04C03C02H2179.8°180.0°
C04C03O01H30.0°90.0°
C03C04C05H5179.4°180.0°
C02C01C06H1180.0°179.7°
C02C01C06C050.5°0.0°
C02C01C06C07179.7°179.7°
C04C05C06C010.8°0.0°
C04C05C06H5180.0°179.9°
C04C05C06C07179.5°179.7°
C01C06C05C07179.8°179.7°
C01C06C07C0832.3°65.0°
C01C06C07C16147.6°115.3°
C06C01C02H2180.0°180.0°
C01C06C05H5179.2°180.0°
C05C06C07C08147.4°115.3°
C05C06C07C1632.6°64.4°
C05C06C01H1179.5°179.7°
C06C05C04H4179.4°180.0°
C06C07C08C16180.0°179.7°
C06C07C08C093.1°0.1°
C06C07C08C15177.6°179.9°
C06C07C16O03149.4°147.9°
C06C07C16C17108.0°107.4°
C07C06C01H10.3°0.0°
C07C06C05H50.6°0.3°
C06C07C16H1224.7°22.2°
C07C08C09C1446.8°115.3°
C07C08C09C15173.8°180.0°
C07C08C09C10137.4°65.0°
C08C07C16O0330.6°32.5°
C08C07C16C1772.0°72.3°
C07C08C15O0334.7°32.1°
C07C08C15C1871.1°72.5°
C07C08C15H11162.5°158.7°
C08C07C16H12155.2°158.1°
C16C07C08C09176.9°179.8°
C16C07C08C152.5°0.3°
C07C16O03C17115.6°107.9°
C07C16O03H12124.7°125.5°
C07C16C17H12133.6°129.3°
C07C16O03C1549.6°50.8°
C07C16C17C1854.3°69.7°
C07C16C17H1363.9°48.6°
C07C16C17H14172.4°172.2°
C14C13C12H9180.0°179.4°
C14C13C12O02179.9°179.6°
C13C14C09H10180.0°179.4°
C14C13C12C110.1°0.3°
C13C14C09C08177.9°179.7°
C13C14C09C102.1°0.5°
C13C12O02C11179.8°179.9°
C12C13C14C091.1°0.6°
C13C12C11C100.1°0.0°
C13C12C11H7179.9°180.0°
C13C12O02H8180.0°90.0°
C12C13C14H10178.9°180.0°
O02C12C11C10179.9°179.9°
O02C12C11H70.1°0.1°
O02C12C13H90.1°0.2°
C14C09C08C10175.8°179.7°
C14C09C10C112.1°0.2°
C14C09C08C15127.0°64.7°
C14C09C10H6177.9°179.7°
C09C14C13H9178.9°180.0°
C12C11C10C091.1°0.1°
C12C11C10H7180.0°179.9°
C12C11C10H6178.9°180.0°
C11C12O02H80.2°89.9°
C11C12C13H9179.9°179.7°
C08C09C10C11177.9°180.0°
C09C08C15O03149.9°147.9°
C09C08C15C18104.3°107.5°
C08C09C10H62.1°0.0°
C08C09C14H102.2°0.3°
C09C08C15H1122.1°21.3°
C09C10C11H6180.0°180.0°
C10C09C08C1548.8°115.1°
C09C10C11H7178.9°180.0°
C10C09C14H10177.9°179.9°
C08C15O03C1651.8°50.7°
C08C15O03C18106.2°107.9°
C08C15O03H11128.2°126.0°
C08C15C18H11127.9°128.9°
C08C15C18C1784.1°69.4°
C08C15C18S01156.0°172.2°
C08C15C18H1536.3°48.6°
O03C16C17H12121.0°126.5°
C16O03C15C1854.4°57.2°
O03C16C17C1851.1°34.5°
C16O03C15H11180.0°176.6°
O03C16C17H13169.3°152.8°
O03C16C17H1467.0°83.5°
C17C16O03C1566.0°57.1°
C16C17C18C1517.5°0.2°
C16C17C18H13118.2°118.2°
C16C17C18H14118.2°118.1°
C16C17C18S01135.3°118.1°
C16C17H13H14125.2°123.7°
C16C17C18H15102.9°118.4°
O03C15C18H11126.7°126.8°
O03C15C18C1721.3°35.0°
O03C15C18S0198.6°83.4°
C15O03C16H12174.3°176.3°
O03C15C18H15141.6°152.9°
C15C18C17S01117.7°118.3°
C15C18C17H15120.5°118.2°
C15C18S01H15122.7°123.7°
C15C18S01O0458.8°67.9°
C15C18S01N0159.7°179.6°
C15C18S01O05179.5°68.8°
C15C18C17H13135.7°118.0°
C15C18C17H14100.6°118.3°
C17C18S01H15124.4°123.4°
C17C18S01O0454.1°44.9°
C17C18S01N01172.6°66.7°
C17C18S01O0566.7°178.4°
C17C18C15H11148.0°161.8°
C18C17C16H12172.1°161.0°
C18C17H13H14125.2°123.7°
C18S01O04N01117.4°111.8°
C18S01O04O05117.6°131.5°
C18S01N01O05117.6°116.0°
C18S01N01C1956.8°112.9°
C18S01N01C20122.0°67.1°
S01C18C15H1128.1°43.4°
S01C18C17H13106.5°123.7°
S01C18C17H1417.1°0.0°
O04S01N01O05124.8°127.9°
O04S01N01C19174.4°3.2°
O04S01N01C204.4°176.8°
O04S01C18H15178.5°168.3°
S01N01C19C20178.8°180.0°
S01N01C20C21133.6°25.6°
S01N01C20C2546.4°154.1°
N01S01C18H1563.0°56.7°
S01N01C19H16180.0°90.0°
S01N01C19H1760.0°150.0°
S01N01C19H1860.0°30.0°
O05S01N01C1960.8°131.0°
O05S01N01C20120.5°48.9°
O05S01C18H1557.8°55.0°
C19N01C20C2145.1°154.3°
C19N01C20C25134.9°25.9°
N01C19H16H17120.0°120.0°
N01C19H16H18120.0°120.0°
N01C19H17H18119.9°120.0°
N01C20C21C25180.0°179.8°
N01C20C21C22179.9°180.0°
N01C20C25C24179.9°179.7°
C20N01C19H161.2°90.0°
C20N01C19H17118.8°30.0°
C20N01C19H18121.2°150.0°
N01C20C21H190.1°0.0°
N01C20C25H230.1°0.0°
C20C21C22H19180.0°180.0°
C20C21C22C230.0°0.1°
C21C20C25C240.1°0.5°
C20C21C22H20180.0°180.0°
C21C20C25H23179.9°179.7°
C22C21C20C250.1°0.2°
C21C22C23H20180.0°179.9°
C21C22C23C240.0°0.0°
C21C22C23H21180.0°179.9°
C20C25C24H23180.0°179.8°
C20C25C24C230.1°0.5°
C25C20C21H19179.9°179.8°
C20C25C24H22179.9°179.8°
C22C23C24C250.0°0.2°
C22C23C24H21180.0°180.0°
C23C22C21H19180.0°180.0°
C22C23C24H22179.9°180.0°
C25C24C23H22180.0°179.7°
C25C24C23H21180.0°179.8°
C24C23C22H20180.0°180.0°
C23C24C25H23179.9°179.7°
H1C01C02H20.1°0.3°
H4C04C05H50.6°0.0°
H6C10C11H71.1°0.1°
H9C13C14H101.1°0.6°
H11C15C18H1591.7°80.3°
H12C16C17H1369.7°80.7°
H12C16C17H1453.9°42.9°
H13C17C18H1515.3°0.2°
H14C17C18H15138.9°123.5°
H16C19H17H18120.0°120.0°
H19C21C22H200.0°0.1°
H20C22C23H210.0°0.0°
H21C23C24H220.1°0.1°
H22C24C25H230.1°0.0°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon